Hi, A list of R2eff to input directly to relax would contain R2eff for every residue as a function of the cpmg frequency (cpmg_frq).
We could have the data input as for intensities, i.e. a list (i.e. a file) for every cpmg frequency, such as : =========== cpmg_frq ============ spin R2eff dR2eff spin R2eff dR2eff ... This wouldn't need too much effort as it is similar to what is done for intensities. Is that what you had in mind ? Regards, Séb :) Edward d'Auvergne wrote: > Do you have an example of what this R2eff data will look like for a > single spin system? > > Regards, > > Edward > > > On Wed, Jan 28, 2009 at 11:39 PM, Sébastien Morin > <[email protected]> wrote: > >> Hi, >> >> relax_data.read() could be modified to allow the reading of r2eff data. >> >> I will try to work this out. >> >> Do you see any special problem that might arise ? >> >> Thanks for the advice ! >> >> >> Séb :) >> >> >> >> Edward d'Auvergne wrote: >> >>> Hi, >>> >>> This user function should be very, very similar to the >>> relax_data.read() user function. Actually, do you think that >>> relax_data.read() could be modified and used instead? >>> >>> Regards, >>> >>> Edward >>> >>> >>> On Thu, Jan 15, 2009 at 3:04 PM, <[email protected]> wrote: >>> >>> >>>> Author: semor >>>> Date: Thu Jan 15 15:04:33 2009 >>>> New Revision: 8472 >>>> >>>> URL: http://svn.gna.org/viewcvs/relax?rev=8472&view=rev >>>> Log: >>>> Started to implement a function for reading 'R2eff' values directly. >>>> >>>> This is as proposed in a post at: >>>> https://mail.gna.org/public/relax-devel/2009-01/msg00020.html >>>> (Message-id: <[email protected]>) >>>> >>>> The function does not contain code yet. >>>> >>>> >>>> Modified: >>>> branches/relax_disp/prompt/relax_disp.py >>>> branches/relax_disp/specific_fns/relax_disp.py >>>> >>>> Modified: branches/relax_disp/prompt/relax_disp.py >>>> URL: >>>> http://svn.gna.org/viewcvs/relax/branches/relax_disp/prompt/relax_disp.py?rev=8472&r1=8471&r2=8472&view=diff >>>> ============================================================================== >>>> --- branches/relax_disp/prompt/relax_disp.py (original) >>>> +++ branches/relax_disp/prompt/relax_disp.py Thu Jan 15 15:04:33 2009 >>>> @@ -182,6 +182,22 @@ >>>> relax_disp_obj.exp_type(exp=exp) >>>> >>>> >>>> + def r2eff_read(self): >>>> + """Function for reading 'R2eff' values directly, instead of >>>> calculating them within relax >>>> + starting from the intensities. >>>> + >>>> + THIS FUNCTION IS NOT WRITTEN YET. >>>> + >>>> + Keyword Arguments >>>> + ~~~~~~~~~~~~~~~~~ >>>> + >>>> + >>>> + Examples >>>> + ~~~~~~~~ >>>> + >>>> + """ >>>> + >>>> + >>>> def select_model(self, model='fast'): >>>> """Function for the selection of the relaxation dispersion curve >>>> type. >>>> >>>> >>>> Modified: branches/relax_disp/specific_fns/relax_disp.py >>>> URL: >>>> http://svn.gna.org/viewcvs/relax/branches/relax_disp/specific_fns/relax_disp.py?rev=8472&r1=8471&r2=8472&view=diff >>>> ============================================================================== >>>> --- branches/relax_disp/specific_fns/relax_disp.py (original) >>>> +++ branches/relax_disp/specific_fns/relax_disp.py Thu Jan 15 15:04:33 2009 >>>> @@ -1084,6 +1084,14 @@ >>>> continue >>>> >>>> >>>> + def r2eff_read(self): >>>> + """Function for reading 'R2eff' values directly, instead of >>>> calculating them within relax >>>> + starting from the intensities. >>>> + >>>> + THIS FUNCTION IS NOT WRITTEN YET. >>>> + """ >>>> + >>>> + >>>> def return_data(self, spin): >>>> """Function for returning the peak intensity data structure. >>>> >>>> >>>> >>>> _______________________________________________ >>>> relax (http://nmr-relax.com) >>>> >>>> This is the relax-commits mailing list >>>> [email protected] >>>> >>>> To unsubscribe from this list, get a password >>>> reminder, or change your subscription options, >>>> visit the list information page at >>>> https://mail.gna.org/listinfo/relax-commits >>>> >>>> >>>> >>> _______________________________________________ >>> relax (http://nmr-relax.com) >>> >>> This is the relax-devel mailing list >>> [email protected] >>> >>> To unsubscribe from this list, get a password >>> reminder, or change your subscription options, >>> visit the list information page at >>> https://mail.gna.org/listinfo/relax-devel >>> >>> >>> >> _______________________________________________ >> relax (http://nmr-relax.com) >> >> This is the relax-devel mailing list >> [email protected] >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, >> visit the list information page at >> https://mail.gna.org/listinfo/relax-devel >> >> > > > _______________________________________________ relax (http://nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
