Hi, How would you design this data around the idea proposed at https://mail.gna.org/public/relax-devel/2009-02/msg00009.html (Message-id: <[email protected]>)? What about R2eff error values? And what about the source of the R2eff values and errors?
Regards, Edward On Thu, Jan 29, 2009 at 2:59 PM, Sébastien Morin <[email protected]> wrote: > Hi, > > A list of R2eff to input directly to relax would contain R2eff for every > residue as a function of the cpmg frequency (cpmg_frq). > > We could have the data input as for intensities, i.e. a list (i.e. a > file) for every cpmg frequency, such as : > > =========== cpmg_frq ============ > spin R2eff dR2eff > spin R2eff dR2eff > ... > > This wouldn't need too much effort as it is similar to what is done for > intensities. > > Is that what you had in mind ? > > Regards, > > > Séb :) > > > > > Edward d'Auvergne wrote: >> Do you have an example of what this R2eff data will look like for a >> single spin system? >> >> Regards, >> >> Edward >> >> >> On Wed, Jan 28, 2009 at 11:39 PM, Sébastien Morin >> <[email protected]> wrote: >> >>> Hi, >>> >>> relax_data.read() could be modified to allow the reading of r2eff data. >>> >>> I will try to work this out. >>> >>> Do you see any special problem that might arise ? >>> >>> Thanks for the advice ! >>> >>> >>> Séb :) >>> >>> >>> >>> Edward d'Auvergne wrote: >>> >>>> Hi, >>>> >>>> This user function should be very, very similar to the >>>> relax_data.read() user function. Actually, do you think that >>>> relax_data.read() could be modified and used instead? >>>> >>>> Regards, >>>> >>>> Edward >>>> >>>> >>>> On Thu, Jan 15, 2009 at 3:04 PM, <[email protected]> wrote: >>>> >>>> >>>>> Author: semor >>>>> Date: Thu Jan 15 15:04:33 2009 >>>>> New Revision: 8472 >>>>> >>>>> URL: http://svn.gna.org/viewcvs/relax?rev=8472&view=rev >>>>> Log: >>>>> Started to implement a function for reading 'R2eff' values directly. >>>>> >>>>> This is as proposed in a post at: >>>>> https://mail.gna.org/public/relax-devel/2009-01/msg00020.html >>>>> (Message-id: <[email protected]>) >>>>> >>>>> The function does not contain code yet. >>>>> >>>>> >>>>> Modified: >>>>> branches/relax_disp/prompt/relax_disp.py >>>>> branches/relax_disp/specific_fns/relax_disp.py >>>>> >>>>> Modified: branches/relax_disp/prompt/relax_disp.py >>>>> URL: >>>>> http://svn.gna.org/viewcvs/relax/branches/relax_disp/prompt/relax_disp.py?rev=8472&r1=8471&r2=8472&view=diff >>>>> ============================================================================== >>>>> --- branches/relax_disp/prompt/relax_disp.py (original) >>>>> +++ branches/relax_disp/prompt/relax_disp.py Thu Jan 15 15:04:33 2009 >>>>> @@ -182,6 +182,22 @@ >>>>> relax_disp_obj.exp_type(exp=exp) >>>>> >>>>> >>>>> + def r2eff_read(self): >>>>> + """Function for reading 'R2eff' values directly, instead of >>>>> calculating them within relax >>>>> + starting from the intensities. >>>>> + >>>>> + THIS FUNCTION IS NOT WRITTEN YET. >>>>> + >>>>> + Keyword Arguments >>>>> + ~~~~~~~~~~~~~~~~~ >>>>> + >>>>> + >>>>> + Examples >>>>> + ~~~~~~~~ >>>>> + >>>>> + """ >>>>> + >>>>> + >>>>> def select_model(self, model='fast'): >>>>> """Function for the selection of the relaxation dispersion curve >>>>> type. >>>>> >>>>> >>>>> Modified: branches/relax_disp/specific_fns/relax_disp.py >>>>> URL: >>>>> http://svn.gna.org/viewcvs/relax/branches/relax_disp/specific_fns/relax_disp.py?rev=8472&r1=8471&r2=8472&view=diff >>>>> ============================================================================== >>>>> --- branches/relax_disp/specific_fns/relax_disp.py (original) >>>>> +++ branches/relax_disp/specific_fns/relax_disp.py Thu Jan 15 15:04:33 >>>>> 2009 >>>>> @@ -1084,6 +1084,14 @@ >>>>> continue >>>>> >>>>> >>>>> + def r2eff_read(self): >>>>> + """Function for reading 'R2eff' values directly, instead of >>>>> calculating them within relax >>>>> + starting from the intensities. >>>>> + >>>>> + THIS FUNCTION IS NOT WRITTEN YET. >>>>> + """ >>>>> + >>>>> + >>>>> def return_data(self, spin): >>>>> """Function for returning the peak intensity data structure. >>>>> >>>>> >>>>> >>>>> _______________________________________________ >>>>> relax (http://nmr-relax.com) >>>>> >>>>> This is the relax-commits mailing list >>>>> [email protected] >>>>> >>>>> To unsubscribe from this list, get a password >>>>> reminder, or change your subscription options, >>>>> visit the list information page at >>>>> https://mail.gna.org/listinfo/relax-commits >>>>> >>>>> >>>>> >>>> _______________________________________________ >>>> relax (http://nmr-relax.com) >>>> >>>> This is the relax-devel mailing list >>>> [email protected] >>>> >>>> To unsubscribe from this list, get a password >>>> reminder, or change your subscription options, >>>> visit the list information page at >>>> https://mail.gna.org/listinfo/relax-devel >>>> >>>> >>>> >>> _______________________________________________ >>> relax (http://nmr-relax.com) >>> >>> This is the relax-devel mailing list >>> [email protected] >>> >>> To unsubscribe from this list, get a password >>> reminder, or change your subscription options, >>> visit the list information page at >>> https://mail.gna.org/listinfo/relax-devel >>> >>> >> >> >> > > _______________________________________________ relax (http://nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
