URL:
<http://gna.org/bugs/?20412>
Summary: GUI tests failed
Project: relax
Submitted by: None
Submitted on: Tue 08 Jan 2013 12:21:31 PM UTC
Category: Test suite
Severity: 3 - Normal
Priority: 5 - Normal
Status: None
Privacy: Public
Assigned to: None
Originator Name: mengjun xue
Originator Email: [email protected]
Open/Closed: Open
Discussion Lock: Any
Release: 2.1.2
Operating System: Microsoft Windows
_______________________________________________________
Details:
relax 2.1.2
Molecular dynamics by NMR data analysis
Copyright (C) 2001-2006 Edward d'Auvergne
Copyright (C) 2006-2012 the relax development team
This is free software which you are welcome to modify and redistribute under
the conditions of the GNU General Public License (GPL). This program,
including all modules, is licensed under the GPL and comes with absolutely no
warranty. For details type 'GPL' within the relax prompt.
Assistance in using the relax prompt and scripting interface can be accessed
by
typing 'help' within the prompt.
Processor fabric: Uni-processor.
#############################
# System / functional tests #
#############################
........................................................................................................................................................................................................................
----------------------------------------------------------------------
Ran 216 tests in 407.875s
OK
##############
# Unit tests #
##############
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
----------------------------------------------------------------------
Ran 1163 tests in 75.187s
OK
#############
# GUI tests #
#############
....F..........................................
======================================================================
FAIL: test_bug_20152_read_dc_file (test_suite.gui_tests.bruker.Bruker)
Test the reading of a DC file, catching bug #20152
(https://gna.org/bugs/?20152).
----------------------------------------------------------------------
relax> pipe.create(pipe_name='mf', pipe_type='mf', bundle=None)
relax> structure.read_pdb(file='C:\\Program
Files\\relax-2.1.2\\test_suite\\shared_data\\structures\\1UBQ_H_trunc.pdb',
dir=None, read_mol=None, set_mol_name=None, read_model=None,
set_model_num=None, parser='internal')
Internal relax PDB parser.
Opening the file 'C:\\Program
Files\\relax-2.1.2\\test_suite\\shared_data\\structures\\1UBQ_H_trunc.pdb' for
reading.
Adding molecule '1UBQ_H_trunc_mol1' to model None (from the original molecule
number 1 of model None)
relax> structure.load_spins(spin_id=None, ave_pos=True)
Adding the following spins to the relax data store.
# mol_name res_num res_name spin_num spin_name
1UBQ_H_trunc_mol1 1 MET 1 N
1UBQ_H_trunc_mol1 2 GLN 9 N
1UBQ_H_trunc_mol1 3 ILE 18 N
relax> bruker.read(ri_id='r1_700', file='C:\\Program
Files\\relax-2.1.2\\test_suite\\shared_data\\bruker_files\\T1_demo_1UBQ_H_trunc.txt',
dir=None)
Opening the file 'C:\\Program
Files\\relax-2.1.2\\test_suite\\shared_data\\bruker_files\\T1_demo_1UBQ_H_trunc.txt'
for reading.
RelaxWarning: The spin '#1UBQ_H_trunc_mol1:1@N' is already named.
RelaxWarning: The spin '#1UBQ_H_trunc_mol1:2@N' is already named.
RelaxWarning: The spin '#1UBQ_H_trunc_mol1:3@N' is already named.
RelaxError: The old Protein Dynamics Center (PDC) files are not supported
Traceback (most recent call last):
File "C:\Program Files\relax-2.1.2\test_suite\gui_tests\bruker.py", line
130, in test_bug_20152_read_dc_file
self.assertEqual(error, True)
AssertionError: False != True
----------------------------------------------------------------------
Ran 47 tests in 195.531s
FAILED (failures=1)
###################################
# Summary of the relax test suite #
###################################
# Optional packages/modules
###########################
Tests skipped due to missing packages/modules:
---------------------------------------------------------------------------------------------
Module System test count Unit test count
GUI test count
---------------------------------------------------------------------------------------------
Scipy 27 37
27
---------------------------------------------------------------------------------------------
# Synopsis
##########
System/functional tests
..................................................................... [ OK ]
Unit tests
..................................................................................
[ OK ]
GUI tests
...............................................................................
[ Failed ]
Synopsis
................................................................................
[ Failed ]
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