On Mon, Mar 26, 2012 at 07:55:22PM +0200, Edward d'Auvergne wrote:
> Hi,
>
> Could you also copy and paste the full output of:
>
> $ relax --info
Done...
% relax --info
/sw/lib/python2.7/site-packages/wx-2.8-gtk2-unicode/wx/_core.py:14448:
UserWarning: wxPython/wxWidgets release number mismatch
warnings.warn("wxPython/wxWidgets release number mismatch")
relax 1.3.14
Molecular dynamics by NMR data analysis
Copyright (C) 2001-2006 Edward d'Auvergne
Copyright (C) 2006-2012 the relax development team
This is free software which you are welcome to modify and redistribute under
the conditions of the
GNU General Public License (GPL). This program, including all modules, is
licensed under the GPL
and comes with absolutely no warranty. For details type 'GPL' within the relax
prompt.
Assistance in using the relax prompt and scripting interface can be accessed by
typing 'help' within
the prompt.
Processor fabric: Uni-processor.
Hardware information:
Machine: i386
Processor: i386
Endianness: little
Total RAM size: ? Mb
Total swap size: ? Mb
Operating system information:
System: Darwin
Release: 10.8.0
Version: Darwin Kernel Version 10.8.0: Tue Jun 7 16:33:36
PDT 2011; root:xnu-1504.15.3~1/RELEASE_I386
Mac version: 10.6.8 (, , ) i386
Distribution:
Full platform string: Darwin-10.8.0-i386-64bit
Python information:
Architecture: 64bit
Python version: 2.7.2
Python branch:
Python build: default, Dec 30 2011 12:01:42
Python compiler: GCC 4.2.1 (Based on Apple Inc. build 5658) (LLVM
build 2336.1.00)
Libc version:
Python implementation: CPython
Python revision:
Python executable: /sw/bin/python2.7
Python flags: sys.flags(debug=0, py3k_warning=0,
division_warning=0, division_new=0, inspect=0, interactive=0, optimize=0,
dont_write_bytecode=0, no_user_site=0, no_site=0, ignore_environment=0,
tabcheck=0, verbose=0, unicode=0, bytes_warning=0)
Python float info: sys.float_info(max=1.7976931348623157e+308,
max_exp=1024, max_10_exp=308, min=2.2250738585072014e-308, min_exp=-1021,
min_10_exp=-307, dig=15, mant_dig=53, epsilon=2.220446049250313e-16, radix=2,
rounds=1)
Python module path: ['/sw/lib/relax-py27', '/sw/lib/python27.zip',
'/sw/lib/python2.7', '/sw/lib/python2.7/plat-darwin',
'/sw/lib/python2.7/plat-mac', '/sw/lib/python2.7/plat-mac/lib-scriptpackages',
'/sw/lib/python2.7/lib-tk', '/sw/lib/python2.7/lib-old',
'/sw/lib/python2.7/lib-dynload', '/sw/lib/python2.7/site-packages',
'/sw/lib/python2.7/site-packages/ccpnmr/ccpnmr2.1/python',
'/sw/lib/python2.7/site-packages/wx-2.8-gtk2-unicode',
'/sw/lib/python2.7/site-packages/Scientific/darwin',
'/sw/lib/relax-py27/extern/scientific_python/darwin']
Python packages (most are optional):
Package Installed Version Path
minfx True Unknown /sw/lib/relax-py27/minfx
bmrblib True Unknown /sw/lib/relax-py27/bmrblib
numpy True 1.6.1
/sw/lib/python2.7/site-packages/numpy
scipy True 0.10.0
/sw/lib/python2.7/site-packages/scipy
wxPython True 2.8.9.1
/sw/lib/python2.7/site-packages/wx-2.8-gtk2-unicode/wx
mpi4py False
epydoc False
optparse True 1.5.3
/sw/lib/python2.7/optparse.pyc
readline True
/sw/lib/python2.7/lib-dynload/readline.so
profile True
/sw/lib/python2.7/profile.pyc
bz2 True
/sw/lib/python2.7/lib-dynload/bz2.so
gzip True /sw/lib/python2.7/gzip.pyc
os.devnull True /sw/lib/python2.7/os.pyc
Compiled relax C modules:
Relaxation curve fitting: True
>
> This will help a lot. I am using Python 2.5, Python 2.6 and Python
> 2.7 (the last is via an application framework at
> /Users/edward/Library/Frameworks/Python.framework/Versions/2.7/bin/python
> which I use to create the monster DMG
> file). In all three, the GUI is working fine. Well, the Python 2.5
> version refuses to quit, but still works. I have pasted the 'relax
> -i' text at the end for reference. This is from the repository r15640
> revision of the 1.3 line.
>
> Regards,
>
> Edward
>
>
> /usr/bin/python2.5 relax -i
>
>
>
> relax repository checkout
>
> Molecular dynamics by NMR data analysis
>
> Copyright (C) 2001-2006 Edward d'Auvergne
> Copyright (C) 2006-2012 the relax development team
>
> This is free software which you are welcome to modify and redistribute
> under the conditions of the
> GNU General Public License (GPL). This program, including all
> modules, is licensed under the GPL
> and comes with absolutely no warranty. For details type 'GPL' within
> the relax prompt.
>
> Assistance in using the relax prompt and scripting interface can be
> accessed by typing 'help' within
> the prompt.
>
> Processor fabric: Uni-processor.
>
> Hardware information:
> Machine: i386
> Processor: i386
> Endianness: little
> Total RAM size: ? Mb
> Total swap size: ? Mb
>
> Operating system information:
> System: Darwin
> Release: 10.7.0
> Version: Darwin Kernel Version 10.7.0: Mon Mar 28
> 13:34:53 EDT 2011; legacy kernel v7
> :xnu-1504.9.37/BUILD/obj/RELEASE_I386
> Mac version: 10.6.7 (, , ) i386
> Distribution:
> Full platform string: Darwin-10.7.0-i386-32bit
>
> Python information:
> Architecture: 32bit
> Python version: 2.5.4
> Python build: r254:67916, Jun 24 2010 21:47:25
> Python compiler: GCC 4.2.1 (Apple Inc. build 5646)
> Libc version:
> Python executable: /usr/bin/python2.5
> Python module path: ['/Users/edward/relax/relax-1.3',
> '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python25.zip',
> '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5',
> '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/plat-darwin',
> '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/plat-mac',
> '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/plat-mac/lib-scriptpackages',
> '/System/Library/Frameworks/Python.framework/Versions/2.5/Extras/lib/python',
> '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/lib-tk',
> '/System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/lib-dynload',
> '/Library/Python/2.5/site-packages',
> '/System/Library/Frameworks/Python.framework/Versions/2.5/Extras/lib/python/PyObjC',
> '/System/Library/Frameworks/Python.framework/Versions/2.5/Extras/lib/python/wx-2.8-mac-unicode',
> '/Users/edward/relax/relax-1.3/extern/scientific_python/darwin']
>
> Python packages (most are optional):
>
> Package Installed Version Path
> minfx True Unknown
> /Users/edward/relax/relax-1.3/minfx
> bmrblib True Unknown
> /Users/edward/relax/relax-1.3/bmrblib
> numpy True 1.2.1
> /System/Library/Frameworks/Python.framework/Versions/2.5/Extras/lib/python/numpy
> scipy False
> wxPython True 2.8.8.1
> /System/Library/Frameworks/Python.framework/Versions/2.5/Extras/lib/python/wx-2.8-mac-unicode/wx
> mpi4py False
> epydoc False
> optparse True 1.5.3
> /System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/optparse.py
> readline True
> /System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/lib-dynload/readline.so
> profile True
> /System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/profile.py
> bz2 True
> /System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/lib-dynload/bz2.so
> gzip True
> /System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/gzip.py
> os.devnull True
> /System/Library/Frameworks/Python.framework/Versions/2.5/lib/python2.5/os.py
>
> Compiled relax C modules:
> Relaxation curve fitting: True
>
>
>
>
> /usr/bin/python2.6 relax -i
> RelaxWarning: os.popen3 is deprecated. Use the subprocess module.
>
>
>
> relax repository checkout
>
> Molecular dynamics by NMR data analysis
>
> Copyright (C) 2001-2006 Edward d'Auvergne
> Copyright (C) 2006-2012 the relax development team
>
> This is free software which you are welcome to modify and redistribute
> under the conditions of the
> GNU General Public License (GPL). This program, including all
> modules, is licensed under the GPL
> and comes with absolutely no warranty. For details type 'GPL' within
> the relax prompt.
>
> Assistance in using the relax prompt and scripting interface can be
> accessed by typing 'help' within
> the prompt.
>
> Processor fabric: Uni-processor.
>
> Hardware information:
> Machine: i386
> Processor: i386
> Endianness: little
> Total RAM size: ? Mb
> Total swap size: ? Mb
>
> Operating system information:
> System: Darwin
> Release: 10.7.0
> Version: Darwin Kernel Version 10.7.0: Mon Mar 28
> 13:34:53 EDT 2011; legacy kernel v7
> :xnu-1504.9.37/BUILD/obj/RELEASE_I386
> Mac version: 10.6.7 (, , ) i386
> Distribution:
> Full platform string: Darwin-10.7.0-i386-64bit
>
> Python information:
> Architecture: 64bit
> Python version: 2.6.1
> Python branch: tags/r261
> Python build: r261:67515, Jun 24 2010 21:47:49
> Python compiler: GCC 4.2.1 (Apple Inc. build 5646)
> Libc version:
> Python implementation: CPython
> Python revision: 67515
> Python executable: /usr/bin/python2.6
> Python flags: sys.flags(debug=0, py3k_warning=0,
> division_warning=0, division_new=0, inspect=0, interactive=0,
> optimize=0, dont_write_bytecode=0, no_user_site=0, no_site=0,
> ignore_environment=0, tabcheck=0, verbose=0, unicode=0,
> bytes_warning=0)
> Python float info:
> sys.floatinfo(max=1.7976931348623157e+308, max_exp=1024,
> max_10_exp=308, min=2.2250738585072014e-308, min_exp=-1021,
> min_10_exp=-307, dig=15, mant_dig=53, epsilon=2.2204460492503131e-16,
> radix=2, rounds=1)
> Python module path: ['/Users/edward/relax/relax-1.3',
> '/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.6/site-packages',
> '/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.6/site-packages/wx-2.8-mac-unicode',
> '/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python26.zip',
> '/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6',
> '/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/plat-darwin',
> '/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/plat-mac',
> '/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/plat-mac/lib-scriptpackages',
> '/System/Library/Frameworks/Python.framework/Versions/2.6/Extras/lib/python',
> '/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/lib-tk',
> '/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/lib-old',
> '/System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/lib-dynload',
> '/Library/Python/2.6/site-packages',
> '/usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.6',
> '/System/Library/Frameworks/Python.framework/Versions/2.6/Extras/lib/python/PyObjC',
> '/System/Library/Frameworks/Python.framework/Versions/2.6/Extras/lib/python/wx-2.8-mac-unicode',
> '/Users/edward/relax/relax-1.3/extern/scientific_python/darwin']
>
> Python packages (most are optional):
>
> Package Installed Version Path
> minfx True Unknown
> /Users/edward/relax/relax-1.3/minfx
> bmrblib True Unknown
> /Users/edward/relax/relax-1.3/bmrblib
> numpy True 1.2.1
> /System/Library/Frameworks/Python.framework/Versions/2.6/Extras/lib/python/numpy
> scipy False
> wxPython True 2.8.12.1
> /usr/local/lib/wxPython-unicode-2.8.12.1/lib/python2.6/site-packages/wx-2.8-mac-unicode/wx
> mpi4py False
> epydoc False
> optparse True 1.5.3
> /System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/optparse.py
> readline True
> /System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/lib-dynload/readline.so
> profile True
> /System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/profile.py
> bz2 True
> /System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/lib-dynload/bz2.so
> gzip True
> /System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/gzip.py
> os.devnull True
> /System/Library/Frameworks/Python.framework/Versions/2.6/lib/python2.6/os.pyc
>
> Compiled relax C modules:
> Relaxation curve fitting: True
>
>
>
>
> /Users/edward/bin/python2.7 relax -i
>
>
>
> relax repository checkout
>
> Molecular dynamics by NMR data analysis
>
> Copyright (C) 2001-2006 Edward d'Auvergne
> Copyright (C) 2006-2012 the relax development team
>
> This is free software which you are welcome to modify and redistribute
> under the conditions of the
> GNU General Public License (GPL). This program, including all
> modules, is licensed under the GPL
> and comes with absolutely no warranty. For details type 'GPL' within
> the relax prompt.
>
> Assistance in using the relax prompt and scripting interface can be
> accessed by typing 'help' within
> the prompt.
>
> Processor fabric: Uni-processor.
>
> Hardware information:
> Machine: i386
> Processor: i386
> Endianness: little
> Total RAM size: ? Mb
> Total swap size: ? Mb
>
> Operating system information:
> System: Darwin
> Release: 10.7.0
> Version: Darwin Kernel Version 10.7.0: Mon Mar 28
> 13:34:53 EDT 2011; legacy kernel v7
> :xnu-1504.9.37/BUILD/obj/RELEASE_I386
> Mac version: 10.6.7 (, , ) i386
> Distribution:
> Full platform string: Darwin-10.7.0-i386-64bit
>
> Python information:
> Architecture: 64bit
> Python version: 2.7.2
> Python branch:
> Python build: default, Sep 28 2011 12:00:11
> Python compiler: GCC 4.2.1 (Apple Inc. build 5659)
> Libc version:
> Python implementation: CPython
> Python revision:
> Python executable:
> /Users/edward/Library/Frameworks/Python.framework/Versions/2.7/Resources/Python.app/Contents/MacOS/Python
> Python flags: sys.flags(debug=0, py3k_warning=0,
> division_warning=0, division_new=0, inspect=0, interactive=0,
> optimize=0, dont_write_bytecode=0, no_user_site=0, no_site=0,
> ignore_environment=0, tabcheck=0, verbose=0, unicode=0,
> bytes_warning=0)
> Python float info:
> sys.float_info(max=1.7976931348623157e+308, max_exp=1024,
> max_10_exp=308, min=2.2250738585072014e-308, min_exp=-1021,
> min_10_exp=-307, dig=15, mant_dig=53, epsilon=2.220446049250313e-16,
> radix=2, rounds=1)
> Python module path: ['/Users/edward/relax/relax-1.3',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/setuptools-0.6c11-py2.7.egg',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/py2app-0.6.3-py2.7.egg',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/macholib-1.4.2-py2.7.egg',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/modulegraph-0.9.1-py2.7.egg',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/altgraph-0.9-py2.7.egg',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python27.zip',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/plat-darwin',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/plat-mac',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/plat-mac/lib-scriptpackages',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-tk',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-old',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages',
> '/Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/wx-2.9.2-osx_cocoa',
> '/Users/edward/relax/relax-1.3/extern/scientific_python/darwin']
>
> Python packages (most are optional):
>
> Package Installed Version Path
> minfx True Unknown
> /Users/edward/relax/relax-1.3/minfx
> bmrblib True Unknown
> /Users/edward/relax/relax-1.3/bmrblib
> numpy True 1.6.1
> /Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy
> scipy True 0.9.0
> /Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy
> wxPython True 2.9.2.4
> /Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/wx-2.9.2-osx_cocoa/wx
> mpi4py True 1.2.2
> /Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/mpi4py
> epydoc False
> optparse True 1.5.3
> /Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/optparse.pyc
> readline True
> /Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/readline.so
> profile True
> /Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/profile.pyc
> bz2 True
> /Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/lib-dynload/bz2.so
> gzip True
> /Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/gzip.pyc
> os.devnull True
> /Users/edward/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/os.pyc
>
> Compiled relax C modules:
> Relaxation curve fitting: True
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