Hi Jack, Could you remove 'scientificpython-py%type_pkg[python] (>= 2.9.0)' from the 'Depends' and 'BuildDepends' sections of the relax fink info file? The tiny fraction of scientific-python modules relax uses is now distributed with the relax source code, so scientific-python is no longer a dependency.
Cheers, Edward On 26 March 2012 19:16, Edward d'Auvergne <[email protected]> wrote: > Hi Jack, > > Thank you for updating this! From memory, I did see a similar problem > when I was using the fink versions of all the software required. > Though I also had many problems with dependency clashes with Python, > wxPython, numpy, and scipy (note this is different to Scientific > Python which is no longer a dependency, see > http://pdb.finkproject.org/pdb/package.php/scipy-py27) - I had to use > the sources and these different relax dependencies had their own > dependencies which were not compatible with each other. The problem, > I think, was the dependance on different gcc versions, so each was > taking a day or longer to build as fink kept rebuilding the full tool > chain. Anyway, that's not completely related to this problem and > might already be resolved in fink. > > The problem looks more like a wxPython issue. Would you be able to > tell me the fink repository software and versions you used for this so > I can try to replicate the problem? Do you use the binary > distribution archive for the dependencies or have fink compile from > the source archives? I am using XCode 3.2.2, but I don't think using > 4.2 will change this problem. If you had the exact sequence of fink > commnds to set the relax dependencies up, that would be appreciated as > I could then be sure that I have close to the same setup as you. Then > I could debug and find the exact xwgtk problem, and come up with a > special work around. > > Cheers! > > Edward > > > > > On 26 March 2012 18:14, Jack Howarth <[email protected]> wrote: >> Edward, >> I am in the process of updating the relax-py and relax packages in fink and >> macports to the latest release. However I am seeing some oddities with the >> new >> gui interface. In both cases, relax 1.3.13 and 1.3.14 exhibits a bug when >> executed as 'relax --gui'. The gui interface window opens much larger than >> the >> displayed contents. Only if I refresh the window does the contents properly >> expand out to the actual size of the window (by clicking on the green zoom >> button in the window frame twice). If I move aside the window, I also see a >> small >> square with a butterfly icon left on the screen. This square can't be closed >> or >> moved. Running 'relax --test-suite' is even more problematic as it seems to >> be trapped in an endless loop of display the squares with the butterfly icon >> and segfaults on exiting... >> >> % relax --test-suite >> /sw/lib/python2.7/site-packages/wx-2.8-gtk2-unicode/wx/_core.py:14448: >> UserWarning: wxPython/wxWidgets release number mismatch >> warnings.warn("wxPython/wxWidgets release number mismatch") >> Echoing of user function calls has been enabled. >> >> >> >> >> ############################# >> # System / functional tests # >> ############################# >> >> >> ......................................................................................................................................................................................................................................... >> ---------------------------------------------------------------------- >> Ran 233 tests in 291.075s >> >> OK >> >> >> >> >> ############## >> # Unit tests # >> ############## >> >> >> ................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ >> ---------------------------------------------------------------------- >> Ran 1232 tests in 11.183s >> >> OK >> >> >> >> >> ############# >> # GUI tests # >> ############# >> >> >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> . >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> . >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> >> (python2.7:9037): Gtk-WARNING **: Unable to find default local directory >> monitor type >> .. >> ---------------------------------------------------------------------- >> Ran 4 tests in 70.926s >> >> OK >> >> >> >> >> ################################### >> # Summary of the relax test suite # >> ################################### >> >> >> # Optional packages/modules >> ########################### >> >> No tests skipped due to missing modules. >> >> # Synopsis >> ########## >> >> System/functional tests ......................................... [ OK ] >> Unit tests ...................................................... [ OK ] >> GUI tests ....................................................... [ OK ] >> Synopsis ........................................................ [ OK ] >> >> >> >> Segmentation fault >> >> It is odd that the GUI tests pass but that relax segfaults in the process. >> Jack >> ps This is on x86_64 fink under darwin10 using Xcode 4.2. >> >> _______________________________________________ >> relax (http://nmr-relax.com) >> >> This is the relax-users mailing list >> [email protected] >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, >> visit the list information page at >> https://mail.gna.org/listinfo/relax-users _______________________________________________ relax (http://www.nmr-relax.com) This is the relax-users mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-users
