Github user jkbradley commented on a diff in the pull request:

    https://github.com/apache/spark/pull/4677#discussion_r25206746
  
    --- Diff: 
mllib/src/test/scala/org/apache/spark/mllib/tree/GradientBoostedTreesSuite.scala
 ---
    @@ -158,6 +158,63 @@ class GradientBoostedTreesSuite extends FunSuite with 
MLlibTestSparkContext {
           }
         }
       }
    +
    +  test("runWithValidation performs better on a validation dataset 
(Regression)") {
    +    // Set numIterations large enough so that it early stops.
    +    val numIterations = 20
    +    val trainRdd = sc.parallelize(GradientBoostedTreesSuite.trainData, 2)
    +    val validateRdd = 
sc.parallelize(GradientBoostedTreesSuite.validateData, 2)
    +
    +    val treeStrategy = new Strategy(algo = Regression, impurity = 
Variance, maxDepth = 2,
    +      categoricalFeaturesInfo = Map.empty)
    +    Array(SquaredError, AbsoluteError).foreach { error =>
    +      val boostingStrategy =
    +        new BoostingStrategy(treeStrategy, error, numIterations, 
validationTol = 0.0)
    +
    +      val gbtValidate = new 
GradientBoostedTrees(boostingStrategy).runWithValidation(
    +        trainRdd, validateRdd)
    +      assert(gbtValidate.numTrees != numIterations)
    +
    +      val gbt = GradientBoostedTrees.train(trainRdd, boostingStrategy)
    +      val errorWithoutValidation = error.computeError(gbt, validateRdd)
    +      val errorWithValidation = error.computeError(gbtValidate, 
validateRdd)
    +      assert(errorWithValidation < errorWithoutValidation)
    +    }
    +  }
    +
    +  test("runWithValidation performs better on a validation dataset 
(Classification)") {
    +    // Set numIterations large enough so that it early stops.
    +    val numIterations = 20
    +    val trainRdd = sc.parallelize(GradientBoostedTreesSuite.trainData, 2)
    +    val validateRdd = 
sc.parallelize(GradientBoostedTreesSuite.validateData, 2)
    +
    +    val treeStrategy = new Strategy(algo = Classification, impurity = 
Variance, maxDepth = 2,
    +      categoricalFeaturesInfo = Map.empty)
    +    val boostingStrategy =
    +      new BoostingStrategy(treeStrategy, LogLoss, numIterations, 
validationTol = 0.0)
    +
    +    // Test that it stops early.
    +    val gbtValidate = new 
GradientBoostedTrees(boostingStrategy).runWithValidation(
    +      trainRdd, validateRdd)
    +    assert(gbtValidate.numTrees != numIterations)
    +
    +    // Remap labels to {-1, 1}
    +    val remappedInput = validateRdd.map(x => new LabeledPoint(2 * x.label 
- 1, x.features))
    +
    +    // The error checked for internally in the GradientBoostedTrees is 
based on Regression.
    +    // Hence for the validation model, the Classification error need not 
be strictly less than
    +    // that done with validation.
    +    val gbtValidateRegressor = new GradientBoostedTreesModel(
    --- End diff --
    
    Oh, I got confused about which dataset remappedInput was from.  In that 
case, I think it's just a flaky test.  I think it would be sufficient to check 
for error <= instead of <, especially since you are already checking that it 
stops early.


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