zhengruifeng commented on a change in pull request #26803: [SPARK-30178][ML]
RobustScaler support large numFeatures
URL: https://github.com/apache/spark/pull/26803#discussion_r358644987
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File path: mllib/src/main/scala/org/apache/spark/ml/feature/RobustScaler.scala
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@@ -147,49 +146,73 @@ class RobustScaler (override val uid: String)
override def fit(dataset: Dataset[_]): RobustScalerModel = {
transformSchema(dataset.schema, logging = true)
- val localRelativeError = $(relativeError)
- val summaries = dataset.select($(inputCol)).rdd.map {
- case Row(vec: Vector) => vec
- }.mapPartitions { iter =>
- var agg: Array[QuantileSummaries] = null
- while (iter.hasNext) {
- val vec = iter.next()
+ val vectors = dataset.select($(inputCol)).rdd.map { case Row(vec: Vector)
=> vec }
+ val numFeatures = MetadataUtils.getNumFeatures(dataset.schema($(inputCol)))
+ .getOrElse(vectors.first().size)
+
+ val localRelativeError = $(relativeError)
+ val localUpper = $(upper)
+ val localLower = $(lower)
+
+ // each featureIndex and its QuantileSummaries
+ val summaries = if (numFeatures < 1000) {
Review comment:
In my tests with small dataset, when numFeatures>4000, then it may cause OOM.
Since the memory overhead of a QuantileSummaries is related to the number of
values it has absorbed, I set a threshold=1000 conservatively.
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