Hm. martin@toolbox:~$ which sage martin@toolbox:~$ mamba activate sage-dev (sage-dev) martin@toolbox:~$ which sage /home/martin/miniforge3/envs/sage-dev/bin/sage (sage-dev) martin@toolbox:~$ echo $PATH /home/martin/miniforge3/envs/sage-dev/bin:/home/martin/miniforge3/condabin:/home/martin/.local/bin:/home/martin/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin: /usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin (sage-dev) martin@toolbox:~$ ls ~/bin sage-alt (sage-dev) martin@toolbox:~$ ls ~/.local/bin arxiv_latex_cleaner coverage coverage-3.8 cysignals-CSI cythonize gprof2dot markdown-it pygmentize runsnake snakeviz codespell coverage3 cygdb cython git-trac kernprof pycodestyle relint runsnakemem tuna (sage-dev) martin@toolbox:~$
I guess I should do some cleaning, but I cannot find a second sage. Martin On Sunday, 1 February 2026 at 20:32:08 UTC+1 [email protected] wrote: > > > On February 1, 2026 12:21:37 PM CST, 'Martin R' via sage-devel < > [email protected]> wrote: > >apparently there is a problem with gap_package_hap. I can run and access > >it in an interactive session, but it makes the doctester hang. > > > >what is the difference when something is executed as part of doctesting? > > > >possibly related: although I can start sage using > > > >(sage-dev) martin@toolbox:~/sage-trac$ sage > > > >I need to prepend "./" when I want to run "sage -t". > > > probably you have a version of sage in your PATH, which is not the same as > ./sage > > this spells trouble... > > > > > >Martin > > > > > >On Friday, 30 January 2026 at 08:54:22 UTC+1 Martin R wrote: > > > >> I don't really know, but I don't think that I have any other gap things > >> installed (yet). > >> > >> (sage-dev) martin@toolbox:~/sage-trac$ mamba list > >> List of packages in environment: > "/home/martin/miniforge3/envs/sage-dev" > >> > >> Name Version Build > >> Channel > >> > ────────────────────────────────────────────────────────────────────────────────── > > > >> > >> 4ti2 1.6.13 h4181bf9_0 > >> conda-forge > >> _libgcc_mutex 0.1 conda_forge > >> conda-forge > >> _openmp_mutex 4.5 2_gnu > >> conda-forge > >> _python_abi3_support 1.0 hd8ed1ab_2 > >> conda-forge > >> _r-mutex 1.0.1 anacondar_1 > >> conda-forge > >> alabaster 1.0.0 pyhd8ed1ab_1 > >> conda-forge > >> alsa-lib 1.2.14 hb9d3cd8_0 > >> conda-forge > >> annotated-types 0.7.0 pyhd8ed1ab_1 > >> conda-forge > >> appdirs 1.4.4 pyhd8ed1ab_1 > >> conda-forge > >> arpack 3.9.1 nompi_hf03ea27_102 > >> conda-forge > >> asttokens 3.0.0 pyhd8ed1ab_1 > >> conda-forge > >> attrs 25.3.0 pyh71513ae_0 > >> conda-forge > >> autoconf 2.72 pl5321hbb4ee43_1 > >> conda-forge > >> automake 1.17 pl5321ha770c72_0 > >> conda-forge > >> babel 2.17.0 pyhd8ed1ab_0 > >> conda-forge > >> backports 1.0 pyhd8ed1ab_5 > >> conda-forge > >> backports.tarfile 1.2.0 pyhd8ed1ab_1 > >> conda-forge > >> bdw-gc 8.2.8 h5888daf_2 > >> conda-forge > >> beautifulsoup4 4.14.2 pyha770c72_0 > >> conda-forge > >> binutils 2.44 h4852527_2 > >> conda-forge > >> binutils_impl_linux-64 2.44 hdf8817f_2 > >> conda-forge > >> binutils_linux-64 2.44 h4852527_2 > >> conda-forge > >> blas 2.136 openblas > >> conda-forge > >> blas-devel 3.9.0 36_h1ea3ea9_openblas > >> conda-forge > >> bleach 6.2.0 pyh29332c3_4 > >> conda-forge > >> bleach-with-css 6.2.0 h82add2a_4 > >> conda-forge > >> bliss 0.77 h00ab1b0_1 > >> conda-forge > >> boltons 25.0.0 pyhd8ed1ab_0 > >> conda-forge > >> boost-cpp 1.85.0 h3c6214e_4 > >> conda-forge > >> brotli 1.1.0 hb03c661_4 > >> conda-forge > >> brotli-bin 1.1.0 hb03c661_4 > >> conda-forge > >> brotli-python 1.1.0 py312h1289d80_4 > >> conda-forge > >> bwidget 1.10.1 ha770c72_1 > >> conda-forge > >> bzip2 1.0.8 hda65f42_8 > >> conda-forge > >> c-ares 1.34.5 hb9d3cd8_0 > >> conda-forge > >> c-compiler 1.11.0 h4d9bdce_0 > >> conda-forge > >> ca-certificates 2025.10.5 hbd8a1cb_0 > >> conda-forge > >> cachecontrol 0.14.3 pyha770c72_0 > >> conda-forge > >> cachecontrol-with-filecache 0.14.3 pyhd8ed1ab_0 > >> conda-forge > >> cairo 1.18.4 h3394656_0 > >> conda-forge > >> cddlib 1!0.94m h9202a9a_0 > >> conda-forge > >> certifi 2025.10.5 pyhd8ed1ab_0 > >> conda-forge > >> cffi 2.0.0 py312h35888ee_0 > >> conda-forge > >> charset-normalizer 3.4.3 pyhd8ed1ab_0 > >> conda-forge > >> click 8.3.0 pyh707e725_0 > >> conda-forge > >> click-default-group 1.2.4 pyhd8ed1ab_1 > >> conda-forge > >> cliquer 1.23 hb03c661_0 > >> conda-forge > >> colorama 0.4.6 pyhd8ed1ab_1 > >> conda-forge > >> comm 0.2.3 pyhe01879c_0 > >> conda-forge > >> conda-gcc-specs 14.3.0 hb991d5c_5 > >> conda-forge > >> conda-lock 3.0.4 pyh367d9c9_1 > >> conda-forge > >> conda-souschef 2.2.3 pyhd8ed1ab_0 > >> conda-forge > >> contourpy 1.3.3 py312hd9148b4_2 > >> conda-forge > >> conway-polynomials 0.10 pyhd8ed1ab_1 > >> conda-forge > >> coverage 7.10.7 py312h8a5da7c_0 > >> conda-forge > >> cpython 3.12.11 py312hd8ed1ab_0 > >> conda-forge > >> crashtest 0.4.1 pyhd8ed1ab_1 > >> conda-forge > >> cryptography 46.0.2 py312hee9fe19_0 > >> conda-forge > >> curl 8.18.0 h4e3cde8_0 > >> conda-forge > >> cxx-compiler 1.11.0 hfcd1e18_0 > >> conda-forge > >> cycler 0.12.1 pyhd8ed1ab_1 > >> conda-forge > >> cypari2 2.2.2 py312hb7bab4f_0 > >> conda-forge > >> cyrus-sasl 2.1.28 hd9c7081_0 > >> conda-forge > >> cysignals 1.12.5 py312h1289d80_0 > >> conda-forge > >> cython 3.1.4 py312h7c45ced_2 > >> conda-forge > >> dbus 1.16.2 h3c4dab8_0 > >> conda-forge > >> debugpy 1.8.17 py312h8285ef7_0 > >> conda-forge > >> decorator 5.2.1 pyhd8ed1ab_0 > >> conda-forge > >> defusedxml 0.7.1 pyhd8ed1ab_0 > >> conda-forge > >> deprecated 1.2.18 pyhd8ed1ab_0 > >> conda-forge > >> distlib 0.4.0 pyhd8ed1ab_0 > >> conda-forge > >> docutils 0.21.2 pyhd8ed1ab_1 > >> conda-forge > >> dot2tex 2.11.3 pyhd8ed1ab_1 > >> conda-forge > >> double-conversion 3.3.1 h5888daf_0 > >> conda-forge > >> dulwich 0.22.8 py312h12e396e_0 > >> conda-forge > >> ecl 24.5.10 h75482ee_1 > >> conda-forge > >> eclib 20250627 hd0dfdeb_0 > >> conda-forge > >> ecm 7.0.6 h90cbb55_0 > >> conda-forge > >> eigen 3.4.0 h171cf75_1 > >> conda-forge > >> ensureconda 1.4.7 pyh29332c3_0 > >> conda-forge > >> exceptiongroup 1.3.0 pyhd8ed1ab_0 > >> conda-forge > >> execnet 2.1.1 pyhd8ed1ab_1 > >> conda-forge > >> executing 2.2.1 pyhd8ed1ab_0 > >> conda-forge > >> expat 2.7.1 hecca717_0 > >> conda-forge > >> fflas-ffpack 2.5.0 h4f9960b_0 > >> conda-forge > >> filelock 3.19.1 pyhd8ed1ab_0 > >> conda-forge > >> flake8 7.3.0 pyhd8ed1ab_0 > >> conda-forge > >> flake8-rst-docstrings 0.3.1 pyhd8ed1ab_0 > >> conda-forge > >> fmt 11.2.0 h07f6e7f_0 > >> conda-forge > >> font-ttf-dejavu-sans-mono 2.37 hab24e00_0 > >> conda-forge > >> font-ttf-inconsolata 3.000 h77eed37_0 > >> conda-forge > >> font-ttf-source-code-pro 2.038 h77eed37_0 > >> conda-forge > >> font-ttf-ubuntu 0.83 h77eed37_3 > >> conda-forge > >> fontconfig 2.15.0 h7e30c49_1 > >> conda-forge > >> fonts-conda-ecosystem 1 0 > >> conda-forge > >> fonts-conda-forge 1 0 > >> conda-forge > >> fonttools 4.60.1 py312h8a5da7c_0 > >> conda-forge > >> fortran-compiler 1.11.0 h9bea470_0 > >> conda-forge > >> fplll 5.5.0 hd20a173_0 > >> conda-forge > >> fpylll 0.6.4 py312ha4ee43a_0 > >> conda-forge > >> freetype 2.14.1 ha770c72_0 > >> conda-forge > >> fribidi 1.0.16 hb03c661_0 > >> conda-forge > >> furo 2024.8.6 pyhd8ed1ab_2 > >> conda-forge > >> gap 4.14.0 ha7249aa_5 > >> conda-forge > >> gap-core 4.14.0 h3b03731_5 > >> conda-forge > >> gap-defaults 4.14.0 ha770c72_5 > >> conda-forge > >> gcc 14.3.0 h76bdaa0_5 > >> conda-forge > >> gcc_impl_linux-64 14.3.0 hd9e9e21_5 > >> conda-forge > >> gcc_linux-64 14.3.0 h1382650_11 > >> conda-forge > >> gf2x 1.3.0 h55551d5_3 > >> conda-forge > >> gfan 0.6.2 hb86e20a_1003 > >> conda-forge > >> gfortran 14.3.0 he448592_5 > >> conda-forge > >> gfortran_impl_linux-64 14.3.0 h7db7018_5 > >> conda-forge > >> gfortran_linux-64 14.3.0 h30a37f7_11 > >> conda-forge > >> gitdb 4.0.12 pyhd8ed1ab_0 > >> conda-forge > >> gitpython 3.1.45 pyhff2d567_0 > >> conda-forge > >> givaro 4.2.0 h49654ea_3 > >> conda-forge > >> glpk 5.0 h445213a_0 > >> conda-forge > >> gmp 6.3.0 hac33072_2 > >> conda-forge > >> gmpy2 2.1.5 py312h7201bc8_3 > >> conda-forge > >> graphite2 1.3.14 hecca717_2 > >> conda-forge > >> grayskull 2.9.1 pyhd8ed1ab_0 > >> conda-forge > >> gsl 2.8 hbf7d49c_1 > >> conda-forge > >> gxx 14.3.0 he448592_5 > >> conda-forge > >> gxx_impl_linux-64 14.3.0 he663afc_5 > >> conda-forge > >> gxx_linux-64 14.3.0 ha7acb78_11 > >> conda-forge > >> h2 4.3.0 pyhcf101f3_0 > >> conda-forge > >> harfbuzz 11.4.5 h15599e2_0 > >> conda-forge > >> hpack 4.1.0 pyhd8ed1ab_0 > >> conda-forge > >> hyperframe 6.1.0 pyhd8ed1ab_0 > >> conda-forge > >> icu 75.1 he02047a_0 > >> conda-forge > >> idna 3.10 pyhd8ed1ab_1 > >> conda-forge > >> igraph 0.10.16 h98b0679_0 > >> conda-forge > >> imagesize 1.4.1 pyhd8ed1ab_0 > >> conda-forge > >> iml 1.0.5 h623f65a_1004 > >> conda-forge > >> importlib-metadata 8.7.0 pyhe01879c_1 > >> conda-forge > >> importlib_resources 6.5.2 pyhd8ed1ab_0 > >> conda-forge > >> iniconfig 2.0.0 pyhd8ed1ab_1 > >> conda-forge > >> ipykernel 6.30.1 pyh82676e8_0 > >> conda-forge > >> ipython 8.18.1 pyh707e725_3 > >> conda-forge > >> ipython_pygments_lexers 1.1.1 pyhd8ed1ab_0 > >> conda-forge > >> ipywidgets 8.1.7 pyhd8ed1ab_0 > >> conda-forge > >> jaraco.classes 3.4.0 pyhd8ed1ab_2 > >> conda-forge > >> jaraco.context 6.0.1 pyhd8ed1ab_0 > >> conda-forge > >> jaraco.functools 4.3.0 pyhd8ed1ab_0 > >> conda-forge > >> jedi 0.19.2 pyhd8ed1ab_1 > >> conda-forge > >> jeepney 0.9.0 pyhd8ed1ab_0 > >> conda-forge > >> jinja2 3.1.6 pyhd8ed1ab_0 > >> conda-forge > >> jsonschema 4.25.1 pyhe01879c_0 > >> conda-forge > >> jsonschema-specifications 2025.9.1 pyhcf101f3_0 > >> conda-forge > >> jupyter-sphinx 0.5.3 pyha770c72_5 > >> conda-forge > >> jupyter_client 8.6.3 pyhd8ed1ab_1 > >> conda-forge > >> jupyter_core 5.8.1 pyh31011fe_0 > >> conda-forge > >> jupyterlab_pygments 0.3.0 pyhd8ed1ab_2 > >> conda-forge > >> jupyterlab_widgets 3.0.15 pyhd8ed1ab_0 > >> conda-forge > >> kernel-headers_linux-64 4.18.0 he073ed8_8 > >> conda-forge > >> keyring 25.6.0 pyha804496_0 > >> conda-forge > >> keyutils 1.6.3 hb9d3cd8_0 > >> conda-forge > >> kiwisolver 1.4.9 py312h0a2e395_1 > >> conda-forge > >> krb5 1.21.3 h659f571_0 > >> conda-forge > >> lcalc 2.1.1 h9cf73fc_0 > >> conda-forge > >> lcms2 2.17 h717163a_0 > >> conda-forge > >> ld_impl_linux-64 2.44 ha97dd6f_2 > >> conda-forge > >> lerc 4.0.0 h0aef613_1 > >> conda-forge > >> libblas 3.9.0 36_h4a7cf45_openblas > >> conda-forge > >> libboost 1.85.0 h0ccab89_4 > >> conda-forge > >> libboost-devel 1.85.0 h00ab1b0_4 > >> conda-forge > >> libboost-headers 1.85.0 ha770c72_4 > >> conda-forge > >> libbraiding 1.3.1 h5888daf_0 > >> conda-forge > >> libbrial 1.2.15 hf69d4a9_0 > >> conda-forge > >> libbrotlicommon 1.1.0 hb03c661_4 > >> conda-forge > >> libbrotlidec 1.1.0 hb03c661_4 > >> conda-forge > >> libbrotlienc 1.1.0 hb03c661_4 > >> conda-forge > >> libcblas 3.9.0 36_h0358290_openblas > >> conda-forge > >> libclang-cpp20.1 20.1.8 default_h99862b1_4 > >> conda-forge > >> libclang13 21.1.0 default_h746c552_1 > >> conda-forge > >> libcups 2.3.3 hb8b1518_5 > >> conda-forge > >> libcurl 8.18.0 h4e3cde8_0 > >> conda-forge > >> libdeflate 1.24 h86f0d12_0 > >> conda-forge > >> libdrm 2.4.125 hb03c661_1 > >> conda-forge > >> libedit 3.1.20250104 pl5321h7949ede_0 > >> conda-forge > >> libegl 1.7.0 ha4b6fd6_2 > >> conda-forge > >> libev 4.33 hd590300_2 > >> conda-forge > >> libexpat 2.7.1 hecca717_0 > >> conda-forge > >> libffi 3.4.6 h2dba641_1 > >> conda-forge > >> libflint 3.2.2 h754cb6e_0 > >> conda-forge > >> libfreetype 2.14.1 ha770c72_0 > >> conda-forge > >> libfreetype6 2.14.1 h73754d4_0 > >> conda-forge > >> libgcc 15.1.0 h767d61c_5 > >> conda-forge > >> libgcc-devel_linux-64 14.3.0 h85bb3a7_105 > >> conda-forge > >> libgcc-ng 15.1.0 h69a702a_5 > >> conda-forge > >> libgd 2.3.3 h6f5c62b_11 > >> conda-forge > >> libgfortran 15.1.0 h69a702a_5 > >> conda-forge > >> libgfortran-ng 15.1.0 h69a702a_5 > >> conda-forge > >> libgfortran5 15.1.0 hcea5267_5 > >> conda-forge > >> libgl 1.7.0 ha4b6fd6_2 > >> conda-forge > >> libglib 2.84.3 hf39c6af_0 > >> conda-forge > >> libglvnd 1.7.0 ha4b6fd6_2 > >> conda-forge > >> libglx 1.7.0 ha4b6fd6_2 > >> conda-forge > >> libgomp 15.1.0 h767d61c_5 > >> conda-forge > >> libhomfly 1.03 hb03c661_0 > >> conda-forge > >> libiconv 1.18 h3b78370_2 > >> conda-forge > >> libjpeg-turbo 3.1.0 hb9d3cd8_0 > >> conda-forge > >> liblapack 3.9.0 36_h47877c9_openblas > >> conda-forge > >> liblapacke 3.9.0 36_h6ae95b6_openblas > >> conda-forge > >> libllvm20 20.1.8 hecd9e04_0 > >> conda-forge > >> libllvm21 21.1.0 hecd9e04_0 > >> conda-forge > >> liblzma 5.8.1 hb9d3cd8_2 > >> conda-forge > >> liblzma-devel 5.8.1 hb9d3cd8_2 > >> conda-forge > >> libnghttp2 1.67.0 had1ee68_0 > >> conda-forge > >> libnsl 2.0.1 hb9d3cd8_1 > >> conda-forge > >> libntlm 1.8 hb9d3cd8_0 > >> conda-forge > >> libopenblas 0.3.30 pthreads_h94d23a6_2 > >> conda-forge > >> libopengl 1.7.0 ha4b6fd6_2 > >> conda-forge > >> libpciaccess 0.18 hb9d3cd8_0 > >> conda-forge > >> libpng 1.6.50 h421ea60_1 > >> conda-forge > >> libpq 17.6 h3675c94_2 > >> conda-forge > >> libsanitizer 14.3.0 hd08acf3_5 > >> conda-forge > >> libsemigroups 2.7.4 h5fb1983_0 > >> conda-forge > >> libsodium 1.0.20 h4ab18f5_0 > >> conda-forge > >> libsqlite 3.50.4 h0c1763c_0 > >> conda-forge > >> libssh2 1.11.1 hcf80075_0 > >> conda-forge > >> libstdcxx 15.1.0 h8f9b012_5 > >> conda-forge > >> libstdcxx-devel_linux-64 14.3.0 h85bb3a7_105 > >> conda-forge > >> libstdcxx-ng 15.1.0 h4852527_5 > >> conda-forge > >> libtiff 4.7.1 h8261f1e_0 > >> conda-forge > >> libuuid 2.41.2 he9a06e4_0 > >> conda-forge > >> libwebp-base 1.6.0 hd42ef1d_0 > >> conda-forge > >> libxcb 1.17.0 h8a09558_0 > >> conda-forge > >> libxcrypt 4.4.36 hd590300_1 > >> conda-forge > >> libxkbcommon 1.11.0 he8b52b9_0 > >> conda-forge > >> libxml2 2.13.8 h04c0eec_1 > >> conda-forge > >> libxslt 1.1.43 h7a3aeb2_0 > >> conda-forge > >> libzlib 1.3.1 hb9d3cd8_2 > >> conda-forge > >> linbox 1.7.1 he8fce6e_0 > >> conda-forge > >> line_profiler 5.0.0 pypi_0 pypi > >> > >> lrcalc 2.1 h5888daf_7 > >> conda-forge > >> lrslib 71.b h8aaf9c6_1 > >> conda-forge > >> m4 1.4.20 hb9d3cd8_0 > >> conda-forge > >> m4ri 20250128 h36e74d4_0 > >> conda-forge > >> m4rie 20250128 h36e74d4_0 > >> conda-forge > >> make 4.4.1 hb9d3cd8_2 > >> conda-forge > >> markupsafe 3.0.3 py312h8a5da7c_0 > >> conda-forge > >> matplotlib 3.10.6 py312h7900ff3_1 > >> conda-forge > >> matplotlib-base 3.10.6 py312he3d6523_1 > >> conda-forge > >> matplotlib-inline 0.1.7 pyhd8ed1ab_1 > >> conda-forge > >> maxima 5.47.0 h75482ee_3 > >> conda-forge > >> mccabe 0.7.0 pyhd8ed1ab_1 > >> conda-forge > >> memory-allocator 0.1.3 py312h66e93f0_1 > >> conda-forge > >> meson 1.9.0 pyhcf101f3_0 > >> conda-forge > >> meson-python 0.18.0 pyh70fd9c4_0 > >> conda-forge > >> mistune 3.1.4 pyhcf101f3_0 > >> conda-forge > >> more-itertools 10.8.0 pyhd8ed1ab_0 > >> conda-forge > >> mpc 1.3.1 h24ddda3_1 > >> conda-forge > >> mpfi 1.5.4 h9f54685_1001 > >> conda-forge > >> mpfr 4.2.1 h90cbb55_3 > >> conda-forge > >> mpmath 1.3.0 pyhd8ed1ab_1 > >> conda-forge > >> msgpack-python 1.1.1 py312hd9148b4_1 > >> conda-forge > >> munkres 1.1.4 pyhd8ed1ab_1 > >> conda-forge > >> nauty 2.9.1 hb03c661_0 > >> conda-forge > >> nbclient 0.10.2 pyhd8ed1ab_0 > >> conda-forge > >> nbconvert 7.16.6 hb482800_0 > >> conda-forge > >> nbconvert-core 7.16.6 pyh29332c3_0 > >> conda-forge > >> nbconvert-pandoc 7.16.6 hed9df3c_0 > >> conda-forge > >> nbformat 5.10.4 pyhd8ed1ab_1 > >> conda-forge > >> ncurses 6.5 h2d0b736_3 > >> conda-forge > >> nest-asyncio 1.6.0 pyhd8ed1ab_1 > >> conda-forge > >> networkx 3.5 pyhe01879c_0 > >> conda-forge > >> ninja 1.13.1 h171cf75_0 > >> conda-forge > >> ntl 11.4.3 hef3c4d3_1 > >> conda-forge > >> numpy 2.3.3 py312h33ff503_0 > >> conda-forge > >> openblas 0.3.30 pthreads_h6ec200e_2 > >> conda-forge > >> openjpeg 2.5.4 h55fea9a_0 > >> conda-forge > >> openldap 2.6.10 he970967_0 > >> conda-forge > >> openssl 3.5.4 h26f9b46_0 > >> conda-forge > >> packaging 25.0 pyh29332c3_1 > >> conda-forge > >> palp 2.21 hb03c661_0 > >> conda-forge > >> pandoc 3.8.1 ha770c72_0 > >> conda-forge > >> pandocfilters 1.5.0 pyhd8ed1ab_0 > >> conda-forge > >> pango 1.56.4 hadf4263_0 > >> conda-forge > >> pari 2.17.2 ha40142e_5_pthread > >> conda-forge > >> pari-elldata 0.0.20161017 0 > >> conda-forge > >> pari-galdata 0.0.20180411 0 > >> conda-forge > >> pari-seadata 0.0.20090618 0 > >> conda-forge > >> pari-seadata-small 0.0.20090618 0 > >> conda-forge > >> parso 0.8.5 pyhcf101f3_0 > >> conda-forge > >> pcre2 10.45 hc749103_0 > >> conda-forge > >> perl 5.32.1 7_hd590300_perl5 > >> conda-forge > >> pexpect 4.9.0 pyhd8ed1ab_1 > >> conda-forge > >> pickleshare 0.7.5 pyhd8ed1ab_1004 > >> conda-forge > >> pillow 11.3.0 py312h7b42cdd_3 > >> conda-forge > >> pip 25.2 pyh8b19718_0 > >> conda-forge > >> pixman 0.46.4 h54a6638_1 > >> conda-forge > >> pkg-config 0.29.2 h4bc722e_1009 > >> conda-forge > >> pkgconfig 1.5.5 pyhd8ed1ab_5 > >> conda-forge > >> pkginfo 1.12.1.2 pyhd8ed1ab_0 > >> conda-forge > >> planarity 3.0.2.0 hd590300_0 > >> conda-forge > >> platformdirs 4.4.0 pyhcf101f3_0 > >> conda-forge > >> pluggy 1.6.0 pyhd8ed1ab_0 > >> conda-forge > >> ppl 1.2 h6ec01c2_1006 > >> conda-forge > >> pplpy 0.8.9 py312h7383a07_2 > >> conda-forge > >> primecount 7.19 h530483c_0 > >> conda-forge > >> primecountpy 0.1.1 py312hd9148b4_0 > >> conda-forge > >> primesieve 12.8 h5888daf_0 > >> conda-forge > >> progressbar2 4.5.0 pyhd8ed1ab_1 > >> conda-forge > >> prompt-toolkit 3.0.52 pyha770c72_0 > >> conda-forge > >> psutil 7.1.0 py312h4c3975b_0 > >> conda-forge > >> pthread-stubs 0.4 hb9d3cd8_1002 > >> conda-forge > >> ptyprocess 0.7.0 pyhd8ed1ab_1 > >> conda-forge > >> pure_eval 0.2.3 pyhd8ed1ab_1 > >> conda-forge > >> pycodestyle 2.14.0 pyhd8ed1ab_0 > >> conda-forge > >> pycosat 0.6.6 py312h4c3975b_3 > >> conda-forge > >> pycparser 2.22 pyh29332c3_1 > >> conda-forge > >> pydantic 2.11.10 pyh3cfb1c2_0 > >> conda-forge > >> pydantic-core 2.33.2 py312h680f630_0 > >> conda-forge > >> pyflakes 3.4.0 pyhd8ed1ab_0 > >> conda-forge > >> pygithub 2.8.1 pyhd8ed1ab_0 > >> conda-forge > >> pygments 2.19.2 pyhd8ed1ab_0 > >> conda-forge > >> pyjwt 2.10.1 pyhd8ed1ab_0 > >> conda-forge > >> pynacl 1.6.0 py312h4c3975b_0 > >> conda-forge > >> pyparsing 3.2.5 pyhcf101f3_0 > >> conda-forge > >> pyproject-metadata 0.9.1 pyhd8ed1ab_0 > >> conda-forge > >> pyproject_hooks 1.2.0 pyhd8ed1ab_1 > >> conda-forge > >> pyside6 6.9.2 py312h5654102_1 > >> conda-forge > >> pysocks 1.7.1 pyha55dd90_7 > >> conda-forge > >> pytest 8.4.2 pyhd8ed1ab_0 > >> conda-forge > >> pytest-xdist 3.8.0 pyhd8ed1ab_0 > >> conda-forge > >> python 3.12.11 h9e4cc4f_0_cpython > >> conda-forge > >> python-build 1.3.0 pyhff2d567_0 > >> conda-forge > >> python-dateutil 2.9.0.post0 pyhe01879c_2 > >> conda-forge > >> python-fastjsonschema 2.21.2 pyhe01879c_0 > >> conda-forge > >> python-gil 3.12.11 hd8ed1ab_0 > >> conda-forge > >> python-installer 0.7.0 pyhff2d567_1 > >> conda-forge > >> python-lrcalc 2.1 py312h2ec8cdc_7 > >> conda-forge > >> python-symengine 0.14.0 py312h406a2a9_1 > >> conda-forge > >> python-utils 3.9.1 pyhff2d567_1 > >> conda-forge > >> python_abi 3.12 8_cp312 > >> conda-forge > >> pytz 2025.2 pyhd8ed1ab_0 > >> conda-forge > >> pyyaml 6.0.3 py312h8a5da7c_0 > >> conda-forge > >> pyzmq 27.1.0 py312hfb55c3c_0 > >> conda-forge > >> qd 2.3.22 h2cc385e_1004 > >> conda-forge > >> qhull 2020.2 h434a139_5 > >> conda-forge > >> qt6-main 6.9.2 h3fc9a0a_0 > >> conda-forge > >> r-base 4.2.3 h2d83a99_19 > >> conda-forge > >> r-lattice 0.22_6 r42h57805ef_0 > >> conda-forge > >> rapidfuzz 3.14.1 py312h1289d80_0 > >> conda-forge > >> readline 8.2 h8c095d6_2 > >> conda-forge > >> referencing 0.36.2 pyh29332c3_0 > >> conda-forge > >> requests 2.32.5 pyhd8ed1ab_0 > >> conda-forge > >> requests-toolbelt 1.0.0 pyhd8ed1ab_1 > >> conda-forge > >> restructuredtext_lint 1.4.0 pyhd8ed1ab_1 > >> conda-forge > >> roman-numerals-py 3.1.0 pyhd8ed1ab_0 > >> conda-forge > >> rpds-py 0.27.1 py312h868fb18_1 > >> conda-forge > >> rpy2 3.5.11 py312r42hc7c0aa3_3 > >> conda-forge > >> ruamel.yaml 0.18.15 py312h4c3975b_1 > >> conda-forge > >> ruamel.yaml.clib 0.2.12 py312h4c3975b_1 > >> conda-forge > >> ruamel.yaml.jinja2 0.2.7 pyhd8ed1ab_1 > >> conda-forge > >> ruff 0.13.3 ha3a3aed_0 > >> conda-forge > >> rw 0.9 hd590300_2 > >> conda-forge > >> sagemath 10.8b8 pypi_0 pypi > >> > >> sagemath-db-elliptic-curves 0.8.1 hecc5488_0 > >> conda-forge > >> sagemath-db-graphs 20210214 hd8ed1ab_0 > >> conda-forge > >> sagemath-db-polytopes 20170220 1 > >> conda-forge > >> scipy 1.16.2 py312h7a1785b_0 > >> conda-forge > >> secretstorage 3.4.0 py312h7900ff3_0 > >> conda-forge > >> sed 4.9 h6688a6e_0 > >> conda-forge > >> semver 3.0.4 pyhd8ed1ab_0 > >> conda-forge > >> setuptools 80.9.0 pyhff2d567_0 > >> conda-forge > >> shellingham 1.5.4 pyhd8ed1ab_1 > >> conda-forge > >> simplegeneric 0.8.1 pyhd8ed1ab_2 > >> conda-forge > >> singular 4.4.1 h7ee4ccf_1 > >> conda-forge > >> sirocco 2.1.0 hd7ee782_1 > >> conda-forge > >> six 1.17.0 pyhe01879c_1 > >> conda-forge > >> smmap 5.0.2 pyhd8ed1ab_0 > >> conda-forge > >> snowballstemmer 3.0.1 pyhd8ed1ab_0 > >> conda-forge > >> soupsieve 2.8.3 pyhd8ed1ab_0 > >> conda-forge > >> sphinx 8.2.3 pyhd8ed1ab_0 > >> conda-forge > >> sphinx-basic-ng 1.0.0b2 pyhd8ed1ab_3 > >> conda-forge > >> sphinx-copybutton 0.5.2 pyhd8ed1ab_1 > >> conda-forge > >> sphinx-inline-tabs 2023.4.21 pyhd8ed1ab_1 > >> conda-forge > >> sphinxcontrib-applehelp 2.0.0 pyhd8ed1ab_1 > >> conda-forge > >> sphinxcontrib-devhelp 2.0.0 pyhd8ed1ab_1 > >> conda-forge > >> sphinxcontrib-htmlhelp 2.1.0 pyhd8ed1ab_1 > >> conda-forge > >> sphinxcontrib-jsmath 1.0.1 pyhd8ed1ab_1 > >> conda-forge > >> sphinxcontrib-qthelp 2.0.0 pyhd8ed1ab_1 > >> conda-forge > >> sphinxcontrib-serializinghtml 1.1.10 pyhd8ed1ab_1 > >> conda-forge > >> sqlite 3.50.4 hbc0de68_0 > >> conda-forge > >> stack_data 0.6.3 pyhd8ed1ab_1 > >> conda-forge > >> stdlib-list 0.11.1 pyhd8ed1ab_0 > >> conda-forge > >> symengine 0.14.0 h064106a_1 > >> conda-forge > >> symmetrica 3.1.0 hb03c661_0 > >> conda-forge > >> sympow 2.023.6 h3028977_4 > >> conda-forge > >> sympy 1.14.0 pyh2585a3b_105 > >> conda-forge > >> sysroot_linux-64 2.28 h4ee821c_8 > >> conda-forge > >> tachyon 0.99b6 hba7d16a_1002 > >> conda-forge > >> tinycss2 1.4.0 pyhd8ed1ab_0 > >> conda-forge > >> tk 8.6.13 noxft_hd72426e_102 > >> conda-forge > >> tktable 2.10 h8d826fa_7 > >> conda-forge > >> toml 0.10.2 pyhd8ed1ab_1 > >> conda-forge > >> tomli 2.2.1 pyhe01879c_2 > >> conda-forge > >> tomli-w 1.2.0 pyhd8ed1ab_0 > >> conda-forge > >> tomlkit 0.13.3 pyha770c72_0 > >> conda-forge > >> tornado 6.5.2 py312h4c3975b_1 > >> conda-forge > >> tqdm 4.67.1 pyhd8ed1ab_1 > >> conda-forge > >> traitlets 5.14.3 pyhd8ed1ab_1 > >> conda-forge > >> trove-classifiers 2025.9.11.17 pyhd8ed1ab_0 > >> conda-forge > >> typing-extensions 4.15.0 h396c80c_0 > >> conda-forge > >> typing-inspection 0.4.2 pyhd8ed1ab_0 > >> conda-forge > >> typing_extensions 4.15.0 pyhcf101f3_0 > >> conda-forge > >> tzdata 2025b h78e105d_0 > >> conda-forge > >> tzlocal 5.3.1 pyh8f84b5b_0 > >> conda-forge > >> unicodedata2 16.0.0 py312h4c3975b_1 > >> conda-forge > >> urllib3 2.5.0 pyhd8ed1ab_0 > >> conda-forge > >> uv 0.8.22 h30787bc_0 > >> conda-forge > >> virtualenv 20.34.0 pyhd8ed1ab_0 > >> conda-forge > >> wayland 1.24.0 h3e06ad9_0 > >> conda-forge > >> wcwidth 0.2.14 pyhd8ed1ab_0 > >> conda-forge > >> webencodings 0.5.1 pyhd8ed1ab_3 > >> conda-forge > >> wheel 0.45.1 pyhd8ed1ab_1 > >> conda-forge > >> widgetsnbextension 4.0.14 pyhd8ed1ab_0 > >> conda-forge > >> wrapt 1.17.3 py312h4c3975b_1 > >> conda-forge > >> xcb-util 0.4.1 h4f16b4b_2 > >> conda-forge > >> xcb-util-cursor 0.1.5 hb9d3cd8_0 > >> conda-forge > >> xcb-util-image 0.4.0 hb711507_2 > >> conda-forge > >> xcb-util-keysyms 0.4.1 hb711507_0 > >> conda-forge > >> xcb-util-renderutil 0.3.10 hb711507_0 > >> conda-forge > >> xcb-util-wm 0.4.2 hb711507_0 > >> conda-forge > >> xkeyboard-config 2.46 hb03c661_0 > >> conda-forge > >> xorg-libice 1.1.2 hb9d3cd8_0 > >> conda-forge > >> xorg-libsm 1.2.6 he73a12e_0 > >> conda-forge > >> xorg-libx11 1.8.12 h4f16b4b_0 > >> conda-forge > >> xorg-libxau 1.0.12 hb9d3cd8_0 > >> conda-forge > >> xorg-libxcomposite 0.4.6 hb9d3cd8_2 > >> conda-forge > >> xorg-libxcursor 1.2.3 hb9d3cd8_0 > >> conda-forge > >> xorg-libxdamage 1.1.6 hb9d3cd8_0 > >> conda-forge > >> xorg-libxdmcp 1.1.5 hb9d3cd8_0 > >> conda-forge > >> xorg-libxext 1.3.6 hb9d3cd8_0 > >> conda-forge > >> xorg-libxfixes 6.0.2 hb03c661_0 > >> conda-forge > >> xorg-libxi 1.8.2 hb9d3cd8_0 > >> conda-forge > >> xorg-libxrandr 1.5.4 hb9d3cd8_0 > >> conda-forge > >> xorg-libxrender 0.9.12 hb9d3cd8_0 > >> conda-forge > >> xorg-libxt 1.3.1 hb9d3cd8_0 > >> conda-forge > >> xorg-libxtst 1.2.5 hb9d3cd8_3 > >> conda-forge > >> xorg-libxxf86vm 1.1.6 hb9d3cd8_0 > >> conda-forge > >> xz 5.8.1 hbcc6ac9_2 > >> conda-forge > >> xz-gpl-tools 5.8.1 hbcc6ac9_2 > >> conda-forge > >> xz-tools 5.8.1 hb9d3cd8_2 > >> conda-forge > >> yaml 0.2.5 h280c20c_3 > >> conda-forge > >> zeromq 4.3.5 h387f397_9 > >> conda-forge > >> zipp 3.23.0 pyhd8ed1ab_0 > >> conda-forge > >> zlib 1.3.1 hb9d3cd8_2 > >> conda-forge > >> zstandard 0.25.0 py312h5253ce2_0 > >> conda-forge > >> zstd 1.5.7 hb8e6e7a_2 > >> conda-forge > >> > >> > >> On Thursday, 29 January 2026 at 23:45:36 UTC+1 [email protected] wrote: > >> > >>> It might be trying to get an online resource, a GAP database of groups > >>> (e.g. altasrep). > >>> What GAP packages are installed? > >>> > >>> > >>> > >>> On January 29, 2026 4:02:45 PM CST, 'Martin R' via sage-devel < > >>> [email protected]> wrote: > >>> > >>>> I am on ubuntu, with conda, and have an extremely strange situation: > >>>> > >>>> (sage-dev) martin@toolbox:~/sage-trac$ ./sage -t --verbose > >>>> src/sage/groups/perm_gps/permgroup.py > >>>> Running doctests with ID 2026-01-29-22-58-01-92547518. > >>>> Git branch: develop > >>>> Git ref: 10.9.beta4 > >>>> Running with SAGE_LOCAL='/home/martin/miniforge3/envs/sage-dev' > >>>> Using --optional=conda,pip,sage,symengine > >>>> Features to be detected: > >>>> > 32_bit,4ti2,benzene,bliss,buckygen,conway_polynomials,coxeter3,csdp,cvxopt,cvxopt,database_cremona_ellcurve,database_cremona_mini_el > >>>> > >>>> > lcurve,database_cubic_hecke,database_ellcurves,database_graphs,database_jones_numfield,database_knotinfo,dot2tex,dvipng,ecm,flatter,fpylll,fricas,gap_package > >>>> > >>>> > _atlasrep,gap_package_design,gap_package_grape,gap_package_guava,gap_package_hap,gap_package_polenta,gap_package_polycyclic,gap_package_qpa,gap_package_quagr > >>>> > >>>> > oup,gfan,giac,glucose,graphviz,imagemagick,info,ipython,jmol,jupymake,jupyter_sphinx,kenzo,khoca,kissat,latte_int,lrcalc_python,lrslib,mathics,matroid_databa > >>>> > >>>> > se,mcqd,meataxe,meson_editable,mpmath,msolve,nauty,networkx,numpy,palp,pandoc,pdf2svg,pdftocairo,pexpect,phitigra,pillow,plantri,polytopes_db,polytopes_db_4d > >>>> > >>>> > ,pplpy,primecountpy,ptyprocess,pycosat,pycryptosat,pynormaliz,pyparsing,python_igraph,regina,requests,rpy2,rubiks,sage.combinat,sage.geometry.polyhedron,sage > >>>> > >>>> > .graphs,sage.groups,sage.libs.braiding,sage.libs.ecl,sage.libs.flint,sage.libs.gap,sage.libs.giac,sage.libs.homfly,sage.libs.linbox,sage.libs.m4ri,sage.libs. > >>>> > >>>> > ntl,sage.libs.pari,sage.libs.singular,sage.misc.cython,sage.modular,sage.modules,sage.numerical.mip,sage.plot,sage.rings.complex_double,sage.rings.finite_rin > >>>> > >>>> > gs,sage.rings.function_field,sage.rings.number_field,sage.rings.padics,sage.rings.polynomial.pbori,sage.rings.real_double,sage.rings.real_mpfr,sage.sat,sage. > >>>> > schemes,sage.symbolic,sage_numerical_backends_coin,sagemath_doc_html,scipy,singular,sirocco,sloane_database,sphinx,symengine_py,sympy,tdlib,threejs,topcom > > > >>>> > >>>> Doctesting 1 file. > >>>> src/bin/sage -t --warn-long 5.0 > >>>> --random-seed=10763884564472103541661530835467931176 > >>>> src/sage/groups/perm_gps/permgroup.py > >>>> > >>>> After this, nothing happens anymore, and even more surprisingly, the > cpu > >>>> is idle. > >>>> > >>>> cubegroup.py in the same directory works, also permgroup_element.pyx, > >>>> but permgroup_named.py does not. > >>>> > >>>> Any ideas? > >>>> > >>>> Martin > >>>> > >>>> > > > -- You received this message because you are subscribed to the Google Groups "sage-devel" group. 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