The question is which one should be first in PATH for sage -t On February 2, 2026 1:57:23 AM CST, Antonio Rojas <[email protected]> wrote: >There are two 'sage' executables: the python entry point installed by meson >in $PATH, and the bash script from the sage source tree. Only the latter >accepts the '-t' option. > >El lunes, 2 de febrero de 2026 a las 8:44:06 UTC+1, [email protected] >escribió: > >Hm. > >martin@toolbox:~$ which sage >martin@toolbox:~$ mamba activate sage-dev >(sage-dev) martin@toolbox:~$ which sage >/home/martin/miniforge3/envs/sage-dev/bin/sage >(sage-dev) martin@toolbox:~$ echo $PATH >/home/martin/miniforge3/envs/sage-dev/bin:/home/martin/miniforge3/condabin:/home/martin/.local/bin:/home/martin/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin: >/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin >(sage-dev) martin@toolbox:~$ ls ~/bin >sage-alt >(sage-dev) martin@toolbox:~$ ls ~/.local/bin >arxiv_latex_cleaner coverage coverage-3.8 cysignals-CSI cythonize >gprof2dot markdown-it pygmentize runsnake snakeviz >codespell coverage3 cygdb cython git-trac >kernprof pycodestyle relint runsnakemem tuna >(sage-dev) martin@toolbox:~$ > >I guess I should do some cleaning, but I cannot find a second sage. > >Martin > > >On Sunday, 1 February 2026 at 20:32:08 UTC+1 [email protected] wrote: > > > >On February 1, 2026 12:21:37 PM CST, 'Martin R' via sage-devel < >[email protected]> wrote: >>apparently there is a problem with gap_package_hap. I can run and access >>it in an interactive session, but it makes the doctester hang. >> >>what is the difference when something is executed as part of doctesting? >> >>possibly related: although I can start sage using >> >>(sage-dev) martin@toolbox:~/sage-trac$ sage >> >>I need to prepend "./" when I want to run "sage -t". >> >probably you have a version of sage in your PATH, which is not the same as >./sage > >this spells trouble... > > > > >>Martin >> >> >>On Friday, 30 January 2026 at 08:54:22 UTC+1 Martin R wrote: >> >>> I don't really know, but I don't think that I have any other gap things >>> installed (yet). >>> >>> (sage-dev) martin@toolbox:~/sage-trac$ mamba list >>> List of packages in environment: "/home/martin/miniforge3/envs/sage-dev" >>> >>> Name Version Build >>> Channel >>> >────────────────────────────────────────────────────────────────────────────────── > > >>> >>> 4ti2 1.6.13 h4181bf9_0 >>> conda-forge >>> _libgcc_mutex 0.1 conda_forge >>> conda-forge >>> _openmp_mutex 4.5 2_gnu >>> conda-forge >>> _python_abi3_support 1.0 hd8ed1ab_2 >>> conda-forge >>> _r-mutex 1.0.1 anacondar_1 >>> conda-forge >>> alabaster 1.0.0 pyhd8ed1ab_1 >>> conda-forge >>> alsa-lib 1.2.14 hb9d3cd8_0 >>> conda-forge >>> annotated-types 0.7.0 pyhd8ed1ab_1 >>> conda-forge >>> appdirs 1.4.4 pyhd8ed1ab_1 >>> conda-forge >>> arpack 3.9.1 nompi_hf03ea27_102 >>> conda-forge >>> asttokens 3.0.0 pyhd8ed1ab_1 >>> conda-forge >>> attrs 25.3.0 pyh71513ae_0 >>> conda-forge >>> autoconf 2.72 pl5321hbb4ee43_1 >>> conda-forge >>> automake 1.17 pl5321ha770c72_0 >>> conda-forge >>> babel 2.17.0 pyhd8ed1ab_0 >>> conda-forge >>> backports 1.0 pyhd8ed1ab_5 >>> conda-forge >>> backports.tarfile 1.2.0 pyhd8ed1ab_1 >>> conda-forge >>> bdw-gc 8.2.8 h5888daf_2 >>> conda-forge >>> beautifulsoup4 4.14.2 pyha770c72_0 >>> conda-forge >>> binutils 2.44 h4852527_2 >>> conda-forge >>> binutils_impl_linux-64 2.44 hdf8817f_2 >>> conda-forge >>> binutils_linux-64 2.44 h4852527_2 >>> conda-forge >>> blas 2.136 openblas >>> conda-forge >>> blas-devel 3.9.0 36_h1ea3ea9_openblas >>> conda-forge >>> bleach 6.2.0 pyh29332c3_4 >>> conda-forge >>> bleach-with-css 6.2.0 h82add2a_4 >>> conda-forge >>> bliss 0.77 h00ab1b0_1 >>> conda-forge >>> boltons 25.0.0 pyhd8ed1ab_0 >>> conda-forge >>> boost-cpp 1.85.0 h3c6214e_4 >>> conda-forge >>> brotli 1.1.0 hb03c661_4 >>> conda-forge >>> brotli-bin 1.1.0 hb03c661_4 >>> conda-forge >>> brotli-python 1.1.0 py312h1289d80_4 >>> conda-forge >>> bwidget 1.10.1 ha770c72_1 >>> conda-forge >>> bzip2 1.0.8 hda65f42_8 >>> conda-forge >>> c-ares 1.34.5 hb9d3cd8_0 >>> conda-forge >>> c-compiler 1.11.0 h4d9bdce_0 >>> conda-forge >>> ca-certificates 2025.10.5 hbd8a1cb_0 >>> conda-forge >>> cachecontrol 0.14.3 pyha770c72_0 >>> conda-forge >>> cachecontrol-with-filecache 0.14.3 pyhd8ed1ab_0 >>> conda-forge >>> cairo 1.18.4 h3394656_0 >>> conda-forge >>> cddlib 1!0.94m h9202a9a_0 >>> conda-forge >>> certifi 2025.10.5 pyhd8ed1ab_0 >>> conda-forge >>> cffi 2.0.0 py312h35888ee_0 >>> conda-forge >>> charset-normalizer 3.4.3 pyhd8ed1ab_0 >>> conda-forge >>> click 8.3.0 pyh707e725_0 >>> conda-forge >>> click-default-group 1.2.4 pyhd8ed1ab_1 >>> conda-forge >>> cliquer 1.23 hb03c661_0 >>> conda-forge >>> colorama 0.4.6 pyhd8ed1ab_1 >>> conda-forge >>> comm 0.2.3 pyhe01879c_0 >>> conda-forge >>> conda-gcc-specs 14.3.0 hb991d5c_5 >>> conda-forge >>> conda-lock 3.0.4 pyh367d9c9_1 >>> conda-forge >>> conda-souschef 2.2.3 pyhd8ed1ab_0 >>> conda-forge >>> contourpy 1.3.3 py312hd9148b4_2 >>> conda-forge >>> conway-polynomials 0.10 pyhd8ed1ab_1 >>> conda-forge >>> coverage 7.10.7 py312h8a5da7c_0 >>> conda-forge >>> cpython 3.12.11 py312hd8ed1ab_0 >>> conda-forge >>> crashtest 0.4.1 pyhd8ed1ab_1 >>> conda-forge >>> cryptography 46.0.2 py312hee9fe19_0 >>> conda-forge >>> curl 8.18.0 h4e3cde8_0 >>> conda-forge >>> cxx-compiler 1.11.0 hfcd1e18_0 >>> conda-forge >>> cycler 0.12.1 pyhd8ed1ab_1 >>> conda-forge >>> cypari2 2.2.2 py312hb7bab4f_0 >>> conda-forge >>> cyrus-sasl 2.1.28 hd9c7081_0 >>> conda-forge >>> cysignals 1.12.5 py312h1289d80_0 >>> conda-forge >>> cython 3.1.4 py312h7c45ced_2 >>> conda-forge >>> dbus 1.16.2 h3c4dab8_0 >>> conda-forge >>> debugpy 1.8.17 py312h8285ef7_0 >>> conda-forge >>> decorator 5.2.1 pyhd8ed1ab_0 >>> conda-forge >>> defusedxml 0.7.1 pyhd8ed1ab_0 >>> conda-forge >>> deprecated 1.2.18 pyhd8ed1ab_0 >>> conda-forge >>> distlib 0.4.0 pyhd8ed1ab_0 >>> conda-forge >>> docutils 0.21.2 pyhd8ed1ab_1 >>> conda-forge >>> dot2tex 2.11.3 pyhd8ed1ab_1 >>> conda-forge >>> double-conversion 3.3.1 h5888daf_0 >>> conda-forge >>> dulwich 0.22.8 py312h12e396e_0 >>> conda-forge >>> ecl 24.5.10 h75482ee_1 >>> conda-forge >>> eclib 20250627 hd0dfdeb_0 >>> conda-forge >>> ecm 7.0.6 h90cbb55_0 >>> conda-forge >>> eigen 3.4.0 h171cf75_1 >>> conda-forge >>> ensureconda 1.4.7 pyh29332c3_0 >>> conda-forge >>> exceptiongroup 1.3.0 pyhd8ed1ab_0 >>> conda-forge >>> execnet 2.1.1 pyhd8ed1ab_1 >>> conda-forge >>> executing 2.2.1 pyhd8ed1ab_0 >>> conda-forge >>> expat 2.7.1 hecca717_0 >>> conda-forge >>> fflas-ffpack 2.5.0 h4f9960b_0 >>> conda-forge >>> filelock 3.19.1 pyhd8ed1ab_0 >>> conda-forge >>> flake8 7.3.0 pyhd8ed1ab_0 >>> conda-forge >>> flake8-rst-docstrings 0.3.1 pyhd8ed1ab_0 >>> conda-forge >>> fmt 11.2.0 h07f6e7f_0 >>> conda-forge >>> font-ttf-dejavu-sans-mono 2.37 hab24e00_0 >>> conda-forge >>> font-ttf-inconsolata 3.000 h77eed37_0 >>> conda-forge >>> font-ttf-source-code-pro 2.038 h77eed37_0 >>> conda-forge >>> font-ttf-ubuntu 0.83 h77eed37_3 >>> conda-forge >>> fontconfig 2.15.0 h7e30c49_1 >>> conda-forge >>> fonts-conda-ecosystem 1 0 >>> conda-forge >>> fonts-conda-forge 1 0 >>> conda-forge >>> fonttools 4.60.1 py312h8a5da7c_0 >>> conda-forge >>> fortran-compiler 1.11.0 h9bea470_0 >>> conda-forge >>> fplll 5.5.0 hd20a173_0 >>> conda-forge >>> fpylll 0.6.4 py312ha4ee43a_0 >>> conda-forge >>> freetype 2.14.1 ha770c72_0 >>> conda-forge >>> fribidi 1.0.16 hb03c661_0 >>> conda-forge >>> furo 2024.8.6 pyhd8ed1ab_2 >>> conda-forge >>> gap 4.14.0 ha7249aa_5 >>> conda-forge >>> gap-core 4.14.0 h3b03731_5 >>> conda-forge >>> gap-defaults 4.14.0 ha770c72_5 >>> conda-forge >>> gcc 14.3.0 h76bdaa0_5 >>> conda-forge >>> gcc_impl_linux-64 14.3.0 hd9e9e21_5 >>> conda-forge >>> gcc_linux-64 14.3.0 h1382650_11 >>> conda-forge >>> gf2x 1.3.0 h55551d5_3 >>> conda-forge >>> gfan 0.6.2 hb86e20a_1003 >>> conda-forge >>> gfortran 14.3.0 he448592_5 >>> conda-forge >>> gfortran_impl_linux-64 14.3.0 h7db7018_5 >>> conda-forge >>> gfortran_linux-64 14.3.0 h30a37f7_11 >>> conda-forge >>> gitdb 4.0.12 pyhd8ed1ab_0 >>> conda-forge >>> gitpython 3.1.45 pyhff2d567_0 >>> conda-forge >>> givaro 4.2.0 h49654ea_3 >>> conda-forge >>> glpk 5.0 h445213a_0 >>> conda-forge >>> gmp 6.3.0 hac33072_2 >>> conda-forge >>> gmpy2 2.1.5 py312h7201bc8_3 >>> conda-forge >>> graphite2 1.3.14 hecca717_2 >>> conda-forge >>> grayskull 2.9.1 pyhd8ed1ab_0 >>> conda-forge >>> gsl 2.8 hbf7d49c_1 >>> conda-forge >>> gxx 14.3.0 he448592_5 >>> conda-forge >>> gxx_impl_linux-64 14.3.0 he663afc_5 >>> conda-forge >>> gxx_linux-64 14.3.0 ha7acb78_11 >>> conda-forge >>> h2 4.3.0 pyhcf101f3_0 >>> conda-forge >>> harfbuzz 11.4.5 h15599e2_0 >>> conda-forge >>> hpack 4.1.0 pyhd8ed1ab_0 >>> conda-forge >>> hyperframe 6.1.0 pyhd8ed1ab_0 >>> conda-forge >>> icu 75.1 he02047a_0 >>> conda-forge >>> idna 3.10 pyhd8ed1ab_1 >>> conda-forge >>> igraph 0.10.16 h98b0679_0 >>> conda-forge >>> imagesize 1.4.1 pyhd8ed1ab_0 >>> conda-forge >>> iml 1.0.5 h623f65a_1004 >>> conda-forge >>> importlib-metadata 8.7.0 pyhe01879c_1 >>> conda-forge >>> importlib_resources 6.5.2 pyhd8ed1ab_0 >>> conda-forge >>> iniconfig 2.0.0 pyhd8ed1ab_1 >>> conda-forge >>> ipykernel 6.30.1 pyh82676e8_0 >>> conda-forge >>> ipython 8.18.1 pyh707e725_3 >>> conda-forge >>> ipython_pygments_lexers 1.1.1 pyhd8ed1ab_0 >>> conda-forge >>> ipywidgets 8.1.7 pyhd8ed1ab_0 >>> conda-forge >>> jaraco.classes 3.4.0 pyhd8ed1ab_2 >>> conda-forge >>> jaraco.context 6.0.1 pyhd8ed1ab_0 >>> conda-forge >>> jaraco.functools 4.3.0 pyhd8ed1ab_0 >>> conda-forge >>> jedi 0.19.2 pyhd8ed1ab_1 >>> conda-forge >>> jeepney 0.9.0 pyhd8ed1ab_0 >>> conda-forge >>> jinja2 3.1.6 pyhd8ed1ab_0 >>> conda-forge >>> jsonschema 4.25.1 pyhe01879c_0 >>> conda-forge >>> jsonschema-specifications 2025.9.1 pyhcf101f3_0 >>> conda-forge >>> jupyter-sphinx 0.5.3 pyha770c72_5 >>> conda-forge >>> jupyter_client 8.6.3 pyhd8ed1ab_1 >>> conda-forge >>> jupyter_core 5.8.1 pyh31011fe_0 >>> conda-forge >>> jupyterlab_pygments 0.3.0 pyhd8ed1ab_2 >>> conda-forge >>> jupyterlab_widgets 3.0.15 pyhd8ed1ab_0 >>> conda-forge >>> kernel-headers_linux-64 4.18.0 he073ed8_8 >>> conda-forge >>> keyring 25.6.0 pyha804496_0 >>> conda-forge >>> keyutils 1.6.3 hb9d3cd8_0 >>> conda-forge >>> kiwisolver 1.4.9 py312h0a2e395_1 >>> conda-forge >>> krb5 1.21.3 h659f571_0 >>> conda-forge >>> lcalc 2.1.1 h9cf73fc_0 >>> conda-forge >>> lcms2 2.17 h717163a_0 >>> conda-forge >>> ld_impl_linux-64 2.44 ha97dd6f_2 >>> conda-forge >>> lerc 4.0.0 h0aef613_1 >>> conda-forge >>> libblas 3.9.0 36_h4a7cf45_openblas >>> conda-forge >>> libboost 1.85.0 h0ccab89_4 >>> conda-forge >>> libboost-devel 1.85.0 h00ab1b0_4 >>> conda-forge >>> libboost-headers 1.85.0 ha770c72_4 >>> conda-forge >>> libbraiding 1.3.1 h5888daf_0 >>> conda-forge >>> libbrial 1.2.15 hf69d4a9_0 >>> conda-forge >>> libbrotlicommon 1.1.0 hb03c661_4 >>> conda-forge >>> libbrotlidec 1.1.0 hb03c661_4 >>> conda-forge >>> libbrotlienc 1.1.0 hb03c661_4 >>> conda-forge >>> libcblas 3.9.0 36_h0358290_openblas >>> conda-forge >>> libclang-cpp20.1 20.1.8 default_h99862b1_4 >>> conda-forge >>> libclang13 21.1.0 default_h746c552_1 >>> conda-forge >>> libcups 2.3.3 hb8b1518_5 >>> conda-forge >>> libcurl 8.18.0 h4e3cde8_0 >>> conda-forge >>> libdeflate 1.24 h86f0d12_0 >>> conda-forge >>> libdrm 2.4.125 hb03c661_1 >>> conda-forge >>> libedit 3.1.20250104 pl5321h7949ede_0 >>> conda-forge >>> libegl 1.7.0 ha4b6fd6_2 >>> conda-forge >>> libev 4.33 hd590300_2 >>> conda-forge >>> libexpat 2.7.1 hecca717_0 >>> conda-forge >>> libffi 3.4.6 h2dba641_1 >>> conda-forge >>> libflint 3.2.2 h754cb6e_0 >>> conda-forge >>> libfreetype 2.14.1 ha770c72_0 >>> conda-forge >>> libfreetype6 2.14.1 h73754d4_0 >>> conda-forge >>> libgcc 15.1.0 h767d61c_5 >>> conda-forge >>> libgcc-devel_linux-64 14.3.0 h85bb3a7_105 >>> conda-forge >>> libgcc-ng 15.1.0 h69a702a_5 >>> conda-forge >>> libgd 2.3.3 h6f5c62b_11 >>> conda-forge >>> libgfortran 15.1.0 h69a702a_5 >>> conda-forge >>> libgfortran-ng 15.1.0 h69a702a_5 >>> conda-forge >>> libgfortran5 15.1.0 hcea5267_5 >>> conda-forge >>> libgl 1.7.0 ha4b6fd6_2 >>> conda-forge >>> libglib 2.84.3 hf39c6af_0 >>> conda-forge >>> libglvnd 1.7.0 ha4b6fd6_2 >>> conda-forge >>> libglx 1.7.0 ha4b6fd6_2 >>> conda-forge >>> libgomp 15.1.0 h767d61c_5 >>> conda-forge >>> libhomfly 1.03 hb03c661_0 >>> conda-forge >>> libiconv 1.18 h3b78370_2 >>> conda-forge >>> libjpeg-turbo 3.1.0 hb9d3cd8_0 >>> conda-forge >>> liblapack 3.9.0 36_h47877c9_openblas >>> conda-forge >>> liblapacke 3.9.0 36_h6ae95b6_openblas >>> conda-forge >>> libllvm20 20.1.8 hecd9e04_0 >>> conda-forge >>> libllvm21 21.1.0 hecd9e04_0 >>> conda-forge >>> liblzma 5.8.1 hb9d3cd8_2 >>> conda-forge >>> liblzma-devel 5.8.1 hb9d3cd8_2 >>> conda-forge >>> libnghttp2 1.67.0 had1ee68_0 >>> conda-forge >>> libnsl 2.0.1 hb9d3cd8_1 >>> conda-forge >>> libntlm 1.8 hb9d3cd8_0 >>> conda-forge >>> libopenblas 0.3.30 pthreads_h94d23a6_2 >>> conda-forge >>> libopengl 1.7.0 ha4b6fd6_2 >>> conda-forge >>> libpciaccess 0.18 hb9d3cd8_0 >>> conda-forge >>> libpng 1.6.50 h421ea60_1 >>> conda-forge >>> libpq 17.6 h3675c94_2 >>> conda-forge >>> libsanitizer 14.3.0 hd08acf3_5 >>> conda-forge >>> libsemigroups 2.7.4 h5fb1983_0 >>> conda-forge >>> libsodium 1.0.20 h4ab18f5_0 >>> conda-forge >>> libsqlite 3.50.4 h0c1763c_0 >>> conda-forge >>> libssh2 1.11.1 hcf80075_0 >>> conda-forge >>> libstdcxx 15.1.0 h8f9b012_5 >>> conda-forge >>> libstdcxx-devel_linux-64 14.3.0 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10.45 hc749103_0 >>> conda-forge >>> perl 5.32.1 7_hd590300_perl5 >>> conda-forge >>> pexpect 4.9.0 pyhd8ed1ab_1 >>> conda-forge >>> pickleshare 0.7.5 pyhd8ed1ab_1004 >>> conda-forge >>> pillow 11.3.0 py312h7b42cdd_3 >>> conda-forge >>> pip 25.2 pyh8b19718_0 >>> conda-forge >>> pixman 0.46.4 h54a6638_1 >>> conda-forge >>> pkg-config 0.29.2 h4bc722e_1009 >>> conda-forge >>> pkgconfig 1.5.5 pyhd8ed1ab_5 >>> conda-forge >>> pkginfo 1.12.1.2 pyhd8ed1ab_0 >>> conda-forge >>> planarity 3.0.2.0 hd590300_0 >>> conda-forge >>> platformdirs 4.4.0 pyhcf101f3_0 >>> conda-forge >>> pluggy 1.6.0 pyhd8ed1ab_0 >>> conda-forge >>> ppl 1.2 h6ec01c2_1006 >>> conda-forge >>> pplpy 0.8.9 py312h7383a07_2 >>> conda-forge >>> primecount 7.19 h530483c_0 >>> conda-forge >>> primecountpy 0.1.1 py312hd9148b4_0 >>> conda-forge >>> primesieve 12.8 h5888daf_0 >>> conda-forge >>> progressbar2 4.5.0 pyhd8ed1ab_1 >>> conda-forge >>> prompt-toolkit 3.0.52 pyha770c72_0 >>> conda-forge >>> psutil 7.1.0 py312h4c3975b_0 >>> conda-forge >>> pthread-stubs 0.4 hb9d3cd8_1002 >>> conda-forge >>> ptyprocess 0.7.0 pyhd8ed1ab_1 >>> conda-forge >>> pure_eval 0.2.3 pyhd8ed1ab_1 >>> conda-forge >>> pycodestyle 2.14.0 pyhd8ed1ab_0 >>> conda-forge >>> pycosat 0.6.6 py312h4c3975b_3 >>> conda-forge >>> pycparser 2.22 pyh29332c3_1 >>> conda-forge >>> pydantic 2.11.10 pyh3cfb1c2_0 >>> conda-forge >>> pydantic-core 2.33.2 py312h680f630_0 >>> conda-forge >>> pyflakes 3.4.0 pyhd8ed1ab_0 >>> conda-forge >>> pygithub 2.8.1 pyhd8ed1ab_0 >>> conda-forge >>> pygments 2.19.2 pyhd8ed1ab_0 >>> conda-forge >>> pyjwt 2.10.1 pyhd8ed1ab_0 >>> conda-forge >>> pynacl 1.6.0 py312h4c3975b_0 >>> conda-forge >>> pyparsing 3.2.5 pyhcf101f3_0 >>> conda-forge >>> pyproject-metadata 0.9.1 pyhd8ed1ab_0 >>> conda-forge >>> pyproject_hooks 1.2.0 pyhd8ed1ab_1 >>> conda-forge >>> pyside6 6.9.2 py312h5654102_1 >>> conda-forge >>> pysocks 1.7.1 pyha55dd90_7 >>> conda-forge >>> pytest 8.4.2 pyhd8ed1ab_0 >>> conda-forge >>> pytest-xdist 3.8.0 pyhd8ed1ab_0 >>> conda-forge >>> python 3.12.11 h9e4cc4f_0_cpython >>> conda-forge >>> python-build 1.3.0 pyhff2d567_0 >>> conda-forge >>> python-dateutil 2.9.0.post0 pyhe01879c_2 >>> conda-forge >>> python-fastjsonschema 2.21.2 pyhe01879c_0 >>> conda-forge >>> python-gil 3.12.11 hd8ed1ab_0 >>> conda-forge >>> python-installer 0.7.0 pyhff2d567_1 >>> conda-forge >>> python-lrcalc 2.1 py312h2ec8cdc_7 >>> conda-forge >>> python-symengine 0.14.0 py312h406a2a9_1 >>> conda-forge >>> python-utils 3.9.1 pyhff2d567_1 >>> conda-forge >>> python_abi 3.12 8_cp312 >>> conda-forge >>> pytz 2025.2 pyhd8ed1ab_0 >>> conda-forge >>> pyyaml 6.0.3 py312h8a5da7c_0 >>> conda-forge >>> pyzmq 27.1.0 py312hfb55c3c_0 >>> conda-forge >>> qd 2.3.22 h2cc385e_1004 >>> conda-forge >>> qhull 2020.2 h434a139_5 >>> conda-forge >>> qt6-main 6.9.2 h3fc9a0a_0 >>> conda-forge >>> r-base 4.2.3 h2d83a99_19 >>> conda-forge >>> r-lattice 0.22_6 r42h57805ef_0 >>> conda-forge >>> rapidfuzz 3.14.1 py312h1289d80_0 >>> conda-forge >>> readline 8.2 h8c095d6_2 >>> conda-forge >>> referencing 0.36.2 pyh29332c3_0 >>> conda-forge >>> requests 2.32.5 pyhd8ed1ab_0 >>> conda-forge >>> requests-toolbelt 1.0.0 pyhd8ed1ab_1 >>> conda-forge >>> restructuredtext_lint 1.4.0 pyhd8ed1ab_1 >>> conda-forge >>> roman-numerals-py 3.1.0 pyhd8ed1ab_0 >>> conda-forge >>> rpds-py 0.27.1 py312h868fb18_1 >>> conda-forge >>> rpy2 3.5.11 py312r42hc7c0aa3_3 >>> conda-forge >>> ruamel.yaml 0.18.15 py312h4c3975b_1 >>> conda-forge >>> ruamel.yaml.clib 0.2.12 py312h4c3975b_1 >>> conda-forge >>> ruamel.yaml.jinja2 0.2.7 pyhd8ed1ab_1 >>> conda-forge >>> ruff 0.13.3 ha3a3aed_0 >>> conda-forge >>> rw 0.9 hd590300_2 >>> conda-forge >>> sagemath 10.8b8 pypi_0 pypi >>> >>> sagemath-db-elliptic-curves 0.8.1 hecc5488_0 >>> conda-forge >>> sagemath-db-graphs 20210214 hd8ed1ab_0 >>> conda-forge >>> sagemath-db-polytopes 20170220 1 >>> conda-forge >>> scipy 1.16.2 py312h7a1785b_0 >>> conda-forge >>> secretstorage 3.4.0 py312h7900ff3_0 >>> conda-forge >>> sed 4.9 h6688a6e_0 >>> conda-forge >>> semver 3.0.4 pyhd8ed1ab_0 >>> conda-forge >>> setuptools 80.9.0 pyhff2d567_0 >>> conda-forge >>> shellingham 1.5.4 pyhd8ed1ab_1 >>> conda-forge >>> simplegeneric 0.8.1 pyhd8ed1ab_2 >>> conda-forge >>> singular 4.4.1 h7ee4ccf_1 >>> conda-forge >>> sirocco 2.1.0 hd7ee782_1 >>> conda-forge >>> six 1.17.0 pyhe01879c_1 >>> conda-forge >>> smmap 5.0.2 pyhd8ed1ab_0 >>> conda-forge >>> snowballstemmer 3.0.1 pyhd8ed1ab_0 >>> conda-forge >>> soupsieve 2.8.3 pyhd8ed1ab_0 >>> conda-forge >>> sphinx 8.2.3 pyhd8ed1ab_0 >>> conda-forge >>> sphinx-basic-ng 1.0.0b2 pyhd8ed1ab_3 >>> conda-forge >>> sphinx-copybutton 0.5.2 pyhd8ed1ab_1 >>> conda-forge >>> sphinx-inline-tabs 2023.4.21 pyhd8ed1ab_1 >>> conda-forge >>> sphinxcontrib-applehelp 2.0.0 pyhd8ed1ab_1 >>> conda-forge >>> sphinxcontrib-devhelp 2.0.0 pyhd8ed1ab_1 >>> conda-forge >>> sphinxcontrib-htmlhelp 2.1.0 pyhd8ed1ab_1 >>> conda-forge >>> sphinxcontrib-jsmath 1.0.1 pyhd8ed1ab_1 >>> conda-forge >>> sphinxcontrib-qthelp 2.0.0 pyhd8ed1ab_1 >>> conda-forge >>> sphinxcontrib-serializinghtml 1.1.10 pyhd8ed1ab_1 >>> conda-forge >>> sqlite 3.50.4 hbc0de68_0 >>> conda-forge >>> stack_data 0.6.3 pyhd8ed1ab_1 >>> conda-forge >>> stdlib-list 0.11.1 pyhd8ed1ab_0 >>> conda-forge >>> symengine 0.14.0 h064106a_1 >>> conda-forge >>> symmetrica 3.1.0 hb03c661_0 >>> conda-forge >>> sympow 2.023.6 h3028977_4 >>> conda-forge >>> sympy 1.14.0 pyh2585a3b_105 >>> conda-forge >>> sysroot_linux-64 2.28 h4ee821c_8 >>> conda-forge >>> tachyon 0.99b6 hba7d16a_1002 >>> conda-forge >>> tinycss2 1.4.0 pyhd8ed1ab_0 >>> conda-forge >>> tk 8.6.13 noxft_hd72426e_102 >>> conda-forge >>> tktable 2.10 h8d826fa_7 >>> conda-forge >>> toml 0.10.2 pyhd8ed1ab_1 >>> conda-forge >>> tomli 2.2.1 pyhe01879c_2 >>> conda-forge >>> tomli-w 1.2.0 pyhd8ed1ab_0 >>> conda-forge >>> tomlkit 0.13.3 pyha770c72_0 >>> conda-forge >>> tornado 6.5.2 py312h4c3975b_1 >>> conda-forge >>> tqdm 4.67.1 pyhd8ed1ab_1 >>> conda-forge >>> traitlets 5.14.3 pyhd8ed1ab_1 >>> conda-forge >>> trove-classifiers 2025.9.11.17 pyhd8ed1ab_0 >>> conda-forge >>> typing-extensions 4.15.0 h396c80c_0 >>> conda-forge >>> typing-inspection 0.4.2 pyhd8ed1ab_0 >>> conda-forge >>> typing_extensions 4.15.0 pyhcf101f3_0 >>> conda-forge >>> tzdata 2025b h78e105d_0 >>> conda-forge >>> tzlocal 5.3.1 pyh8f84b5b_0 >>> conda-forge >>> unicodedata2 16.0.0 py312h4c3975b_1 >>> conda-forge >>> urllib3 2.5.0 pyhd8ed1ab_0 >>> conda-forge >>> uv 0.8.22 h30787bc_0 >>> conda-forge >>> virtualenv 20.34.0 pyhd8ed1ab_0 >>> conda-forge >>> wayland 1.24.0 h3e06ad9_0 >>> conda-forge >>> wcwidth 0.2.14 pyhd8ed1ab_0 >>> conda-forge >>> webencodings 0.5.1 pyhd8ed1ab_3 >>> conda-forge >>> wheel 0.45.1 pyhd8ed1ab_1 >>> conda-forge >>> widgetsnbextension 4.0.14 pyhd8ed1ab_0 >>> conda-forge >>> wrapt 1.17.3 py312h4c3975b_1 >>> conda-forge >>> xcb-util 0.4.1 h4f16b4b_2 >>> conda-forge >>> xcb-util-cursor 0.1.5 hb9d3cd8_0 >>> conda-forge >>> xcb-util-image 0.4.0 hb711507_2 >>> conda-forge >>> xcb-util-keysyms 0.4.1 hb711507_0 >>> conda-forge >>> xcb-util-renderutil 0.3.10 hb711507_0 >>> conda-forge >>> xcb-util-wm 0.4.2 hb711507_0 >>> conda-forge >>> xkeyboard-config 2.46 hb03c661_0 >>> conda-forge >>> xorg-libice 1.1.2 hb9d3cd8_0 >>> conda-forge >>> xorg-libsm 1.2.6 he73a12e_0 >>> conda-forge >>> xorg-libx11 1.8.12 h4f16b4b_0 >>> conda-forge >>> xorg-libxau 1.0.12 hb9d3cd8_0 >>> conda-forge >>> xorg-libxcomposite 0.4.6 hb9d3cd8_2 >>> conda-forge >>> xorg-libxcursor 1.2.3 hb9d3cd8_0 >>> conda-forge >>> xorg-libxdamage 1.1.6 hb9d3cd8_0 >>> conda-forge >>> xorg-libxdmcp 1.1.5 hb9d3cd8_0 >>> conda-forge >>> xorg-libxext 1.3.6 hb9d3cd8_0 >>> conda-forge >>> xorg-libxfixes 6.0.2 hb03c661_0 >>> conda-forge >>> xorg-libxi 1.8.2 hb9d3cd8_0 >>> conda-forge >>> xorg-libxrandr 1.5.4 hb9d3cd8_0 >>> conda-forge >>> xorg-libxrender 0.9.12 hb9d3cd8_0 >>> conda-forge >>> xorg-libxt 1.3.1 hb9d3cd8_0 >>> conda-forge >>> xorg-libxtst 1.2.5 hb9d3cd8_3 >>> conda-forge >>> xorg-libxxf86vm 1.1.6 hb9d3cd8_0 >>> conda-forge >>> xz 5.8.1 hbcc6ac9_2 >>> conda-forge >>> xz-gpl-tools 5.8.1 hbcc6ac9_2 >>> conda-forge >>> xz-tools 5.8.1 hb9d3cd8_2 >>> conda-forge >>> yaml 0.2.5 h280c20c_3 >>> conda-forge >>> zeromq 4.3.5 h387f397_9 >>> conda-forge >>> zipp 3.23.0 pyhd8ed1ab_0 >>> conda-forge >>> zlib 1.3.1 hb9d3cd8_2 >>> conda-forge >>> zstandard 0.25.0 py312h5253ce2_0 >>> conda-forge >>> zstd 1.5.7 hb8e6e7a_2 >>> conda-forge >>> >>> >>> On Thursday, 29 January 2026 at 23:45:36 UTC+1 [email protected] wrote: >>> >>>> It might be trying to get an online resource, a GAP database of groups >>>> (e.g. altasrep). >>>> What GAP packages are installed? >>>> >>>> >>>> >>>> On January 29, 2026 4:02:45 PM CST, 'Martin R' via sage-devel < >>>> [email protected]> wrote: >>>> >>>>> I am on ubuntu, with conda, and have an extremely strange situation: >>>>> >>>>> (sage-dev) martin@toolbox:~/sage-trac$ ./sage -t --verbose >>>>> src/sage/groups/perm_gps/permgroup.py >>>>> Running doctests with ID 2026-01-29-22-58-01-92547518. >>>>> Git branch: develop >>>>> Git ref: 10.9.beta4 >>>>> Running with SAGE_LOCAL='/home/martin/miniforge3/envs/sage-dev' >>>>> Using --optional=conda,pip,sage,symengine >>>>> Features to be detected: >>>>> >32_bit,4ti2,benzene,bliss,buckygen,conway_polynomials,coxeter3,csdp,cvxopt,cvxopt,database_cremona_ellcurve,database_cremona_mini_el > > >>>>> >>>>> >lcurve,database_cubic_hecke,database_ellcurves,database_graphs,database_jones_numfield,database_knotinfo,dot2tex,dvipng,ecm,flatter,fpylll,fricas,gap_package > > >>>>> >>>>> >_atlasrep,gap_package_design,gap_package_grape,gap_package_guava,gap_package_hap,gap_package_polenta,gap_package_polycyclic,gap_package_qpa,gap_package_quagr > > >>>>> >>>>> >oup,gfan,giac,glucose,graphviz,imagemagick,info,ipython,jmol,jupymake,jupyter_sphinx,kenzo,khoca,kissat,latte_int,lrcalc_python,lrslib,mathics,matroid_databa > > >>>>> >>>>> >se,mcqd,meataxe,meson_editable,mpmath,msolve,nauty,networkx,numpy,palp,pandoc,pdf2svg,pdftocairo,pexpect,phitigra,pillow,plantri,polytopes_db,polytopes_db_4d > > >>>>> >>>>> >,pplpy,primecountpy,ptyprocess,pycosat,pycryptosat,pynormaliz,pyparsing,python_igraph,regina,requests,rpy2,rubiks,sage.combinat,sage.geometry.polyhedron,sage > > >>>>> >>>>> >.graphs,sage.groups,sage.libs.braiding,sage.libs.ecl,sage.libs.flint,sage.libs.gap,sage.libs.giac,sage.libs.homfly,sage.libs.linbox,sage.libs.m4ri,sage.libs. > > >>>>> >>>>> >ntl,sage.libs.pari,sage.libs.singular,sage.misc.cython,sage.modular,sage.modules,sage.numerical.mip,sage.plot,sage.rings.complex_double,sage.rings.finite_rin > > >>>>> >>>>> >gs,sage.rings.function_field,sage.rings.number_field,sage.rings.padics,sage.rings.polynomial.pbori,sage.rings.real_double,sage.rings.real_mpfr,sage.sat,sage. > > >>>>> >schemes,sage.symbolic,sage_numerical_backends_coin,sagemath_doc_html,scipy,singular,sirocco,sloane_database,sphinx,symengine_py,sympy,tdlib,threejs,topcom > > >>>>> >>>>> Doctesting 1 file. >>>>> src/bin/sage -t --warn-long 5.0 >>>>> --random-seed=10763884564472103541661530835467931176 >>>>> src/sage/groups/perm_gps/permgroup.py >>>>> >>>>> After this, nothing happens anymore, and even more surprisingly, the >cpu >>>>> is idle. >>>>> >>>>> cubegroup.py in the same directory works, also permgroup_element.pyx, >>>>> but permgroup_named.py does not. >>>>> >>>>> Any ideas? >>>>> >>>>> Martin >>>>> >>>>> >> > >-- >You received this message because you are subscribed to the Google Groups >"sage-devel" group. >To unsubscribe from this group and stop receiving emails from it, send an >email to [email protected]. >To view this discussion visit >https://groups.google.com/d/msgid/sage-devel/b09c3cf5-c931-4786-aa15-6ef9159e707dn%40googlegroups.com.
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