On Fri, May 15, 2020 at 9:59 AM Emmanuel Charpentier
<[email protected]> wrote:
>
> This I was aware of and rebuilt them (successfully, it seems : I rebuilt 
> fflas_ffpack, giac and cvxopt). I still stumble on the HTML doc...
>
> Le vendredi 15 mai 2020 10:55:47 UTC+2, Dima Pasechnik a écrit :
>>
>> I also needed to rebuild the other deps of gsl, ie giac and
>> fflas_ffpack - which you had to uninstall just as you did for cvxopt
>>
>>
>> On Fri, May 15, 2020 at 9:48 AM Emmanuel Charpentier
>> <[email protected]> wrote:
>> >
>> > Thank you, Dima !
>> >
>> > However, this isn't enough. Friom the relevant portion of install.log :
>> >
>> > [dochtml] Traceback (most recent call last):
>> > [dochtml]   File "/usr/lib/python3.7/runpy.py", line 183, in 
>> > _run_module_as_main
>> > [dochtml]     mod_name, mod_spec, code = _get_module_details(mod_name, 
>> > _Error)
>> > [dochtml]   File "/usr/lib/python3.7/runpy.py", line 142, in 
>> > _get_module_details
>> > [dochtml]     return _get_module_details(pkg_main_name, error)
>> > [dochtml]   File "/usr/lib/python3.7/runpy.py", line 109, in 
>> > _get_module_details
>> > [dochtml]     __import__(pkg_name)
>> > [dochtml]   File 
>> > "/usr/local/sage-9/local/lib/python3.7/site-packages/sage_setup/docbuild/__init__.py",
>> >  line 59, in <module>
>> > [dochtml]     import sage.all
>> > [dochtml]   File 
>> > "/usr/local/sage-9/local/lib/python3.7/site-packages/sage/all.py", line 
>> > 119, in <module>
>> > [dochtml]     from sage.misc.all       import *         # takes a while
>> > [dochtml]   File 
>> > "/usr/local/sage-9/local/lib/python3.7/site-packages/sage/misc/all.py", 
>> > line 84, in <module>
>> > [dochtml]     from .functional import (additive_order,
>> > [dochtml]   File 
>> > "/usr/local/sage-9/local/lib/python3.7/site-packages/sage/misc/functional.py",
>> >  line 27, in <module>
>> > [dochtml]     from sage.rings.complex_double import CDF
>> > [dochtml] ImportError: libgsl.so.23: cannot open shared object file: No 
>> > such file or directory

I don't know - this seems to be the right library version.
What do get from

ls -l $SAGE_LOCAL/lib/*gsl*

?

>> > make[3]: *** [Makefile:2013: doc-html] Error 1
>> >
>> > Is there somethoing specific to clean ?
>> >
>> >
>> > Le vendredi 15 mai 2020 08:42:08 UTC+2, Dima Pasechnik a écrit :
>> >>
>> >> make cvxopt-clean
>> >>
>> >>
>> >>
>> >> On Fri, 15 May 2020 at 06:27, Emmanuel Charpentier 
>> >> <[email protected]> wrote:
>> >>>
>> >>> Okay. How do you uninstall them ? The ./sage -advanced commmand doesn't 
>> >>> suggest anything...
>> >>>
>> >>>
>> >>> Le jeudi 14 mai 2020 22:36:30 UTC+2, Matthias Köppe a écrit :
>> >>>>
>> >>>> On Thursday, May 14, 2020 at 1:02:38 PM UTC-7, Emmanuel Charpentier 
>> >>>> wrote:
>> >>>>>
>> >>>>> On Debian testing, upgrading from  9.1.rc3 fails early on longsl23 not 
>> >>>>> beaing resent (I have libgsl25).
>> >>>>>
>> >>>>> Is there a way to avoid rebuilding from scratch (make distclean...) ?
>> >>>>>
>> >>>>
>> >>>> It should suffice to uninstall the sage packages that depend on gsl
>> >>>>
>> >>>> $ grep gsl build/pkgs/*/dependencies
>> >>>>
>> >>>> build/pkgs/cvxopt/dependencies:$(PYTHON) numpy $(BLAS) gsl glpk 
>> >>>> suitesparse | $(PYTHON_TOOLCHAIN) pkgconfig nose matplotlib
>> >>>>
>> >>>> build/pkgs/fflas_ffpack/dependencies:$(MP_LIBRARY) givaro gsl $(BLAS) | 
>> >>>> pkgconf
>> >>>>
>> >>>> build/pkgs/giac/dependencies:readline libpng $(MP_LIBRARY) mpfr mpfi 
>> >>>> ntl gsl pari
>> >>>
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