Aaaarghhh : cypari2 is installed by Sage itself : after (some operations amounting to removing Python packages, then) make distclean && make :
charpent@zen-book-flip:/usr/local/sage-9$ sage -optional | grep -v ot_instal /usr/local/sage-9/local/var/lib/sage/venv-python3.9/lib/python3.9/site-packages/sage/misc/package.py:116: UserWarning: failed to fetch the version of pkg='ore_algebra' at https://pypi.org/pypi/ore_algebra/json warnings.warn("failed to fetch the version of pkg={!r} at {}".format(pkg, url)) [package]...............................[latest version] ([version]) cypari2.................................? (2.1.2) python_dateutil.........................? (2.8.1) sagemath_standard.......................? (9.5b5) I’ll reinstall the other packages and retest notwithstanding… Le samedi 30 octobre 2021 à 14:40:35 UTC+2, Emmanuel Charpentier a écrit : > I tried to upgrade 9.5.beta3 to 9.5.beta5 ith the following packages > installed : > > cmdstanpy...............................? (0.9.77) > cypari2.................................? (2.1.2) > dot2tex.................................2.11.3.p0 (2.11.3.p0) > fricas..................................1.3.7.p1 (1.3.7.p1) > gap_packages............................4.11.1 (4.11.1) > json5...................................? (0.9.6) > jupyterlab..............................3.2.1 (2.2.10) > jupyterlab_server.......................? (1.2.0) > jupyterlab_widgets......................none (2.0) > libsemigroups...........................1.1.0 (1.1.0) > nodeenv.................................1.6.0 (1.4.0) > nodejs..................................none (12.18.3) > nose....................................? (1.3.7) > pandas..................................? (1.3.3) > psutil..................................? (5.2.0.p2) > python_dateutil.........................? (2.8.1) > sagemath_standard.......................? (9.5b5) > ujson...................................? (4.2.0) > > ptestlong gives the following looong list of failures crashing Sage : > > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/schemes/elliptic_curves/isogeny_small_degree.py # Killed due to > segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/schemes/elliptic_curves/ell_rational_field.py # Killed due to > segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/schemes/elliptic_curves/ell_number_field.py # Killed due to > segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/schemes/cyclic_covers/cycliccover_finite_field.py # Killed due to > segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/pollack_stevens/modsym.py # 9 doctests failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/rings/number_field/number_field.py # Killed due to segmentation > fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modform/element.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/dynamics/arithmetic_dynamics/projective_ds.py # Killed due to > segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/graphs/generic_graph.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modform/ring.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/tests/books/computational-mathematics-with-sagemath/combinat_doctest.py > # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/schemes/elliptic_curves/heegner.py # Killed due to segmentation > fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/interfaces/fricas.py # 1 doctest failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/btquotients/pautomorphicform.py # Killed due to > segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/misc/sageinspect.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/matrix/matrix_integer_dense_hnf.py # Killed due to segmentation > fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/local_comp/local_comp.py # 4 doctests failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modform_hecketriangle/hecke_triangle_group_element.py # 8 > doctests failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modules/free_module_integer.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/schemes/elliptic_curves/ell_curve_isogeny.py # Killed due to > segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modform_hecketriangle/graded_ring_element.py # 25 doctests > failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 src/sage/arith/misc.py > # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 src/sage/rings/qqbar.py > # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modform_hecketriangle/readme.py # 12 doctests failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/matrix/matrix2.pyx # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/combinat/tutorial.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/quadratic_forms/genera/genus.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/calculus/calculus.py # 5 doctests failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modform_hecketriangle/abstract_space.py # 21 doctests failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/combinat/partition.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/abvar/abvar.py # 10 doctests failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modform/ambient_R.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/matrix/matrix_integer_dense.pyx # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/misc/cachefunc.pyx # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/algebras/quatalg/quaternion_algebra.py # Killed due to segmentation > fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modform/constructor.py # 1 doctest failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modules/free_quadratic_module_integer_symmetric.py # Killed due to > segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/doc/en/thematic_tutorials/explicit_methods_in_number_theory/birds_other.rst > # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/abvar/lseries.py # 8 doctests failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modsym/space.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/matrix/benchmark.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/btquotients/btquotient.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/rings/number_field/S_unit_solver.py # Killed due to segmentation > fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/overconvergent/genus0.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/hecke/submodule.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/typeset/ascii_art.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modform_hecketriangle/element.py # 10 doctests failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/functions/log.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/schemes/plane_conics/con_rational_function_field.py # Killed due to > segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/structure/sage_object.pyx # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/matrix/matrix_rational_dense.pyx # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/repl/ipython_extension.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/repl/interpreter.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/hecke/module.py # 2 doctests failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/rings/number_field/order.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modules/fg_pid/fgp_module.py # 1 doctest failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/doc/ja/a_tour_of_sage/index.rst # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/combinat/quickref.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/doc/fr/a_tour_of_sage/index.rst # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/doc/tr/a_tour_of_sage/index.rst # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/doc/pt/a_tour_of_sage/index.rst # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/doc/de/a_tour_of_sage/index.rst # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/graphs/base/static_sparse_graph.pyx # Killed due to segmentation > fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/doc/hu/a_tour_of_sage/index.rst # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/doc/it/a_tour_of_sage/index.rst # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/doc/en/a_tour_of_sage/index.rst # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/matrix/matrix_cyclo_dense.pyx # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/doc/es/a_tour_of_sage/index.rst # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/combinat/combinat.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/functions/transcendental.py # 1 doctest failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/matrix/matrix_integer_sparse.pyx # 1 doctest failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modsym/subspace.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/hecke/element.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modsym/tests.py # 1 doctest failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/repl/display/formatter.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/repl/interface_magic.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/doc/en/thematic_tutorials/explicit_methods_in_number_theory/modabvar.rst > # 3 doctests failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/tests/book_stein_modform.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/repl/ipython_tests.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 src/sage/repl/attach.py > # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/abvar/cuspidal_subgroup.py # 9 doctests failed > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/rings/polynomial/real_roots.pyx # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/quadratic_forms/quadratic_form__local_density_interfaces.py # > Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/matrix/constructor.pyx # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/modform/vm_basis.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/rings/bernmm.pyx # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/repl/rich_output/backend_ipython.py # Killed due to segmentation > fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/modular/buzzard.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/interfaces/macaulay2.py # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/libs/flint/arith.pyx # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/matrix/misc.pyx # Killed due to segmentation fault > sage -t --long --warn-long 215.7 > --random-seed=276876733579103606015550424535934104048 > src/sage/rings/bernoulli_mod_p.pyx # Killed due to segmentation fault > > Python error messages *seen* (but not logged) during ptestlong or > attempts to reproduce the tests point to a problem in cypari2 which > somehow managed to invite itself. > > I’ll try to recompile after distclean, reinstall packages (cautiously > avoiding cypari2), retest and report. > > HTH, > > > Le vendredi 29 octobre 2021 à 23:42:11 UTC+2, Volker Braun a écrit : > >> As always, you can get the latest beta version from the "develop" git >> branch. Alternatively, the self-contained source tarball is at >> http://www.sagemath.org/download-latest.html >> >> f716a0b366 (tag: 9.5.beta5, trac/develop) Updated SageMath version to >> 9.5.beta5 >> c5a87834e7 Trac #32758: fix E713 and E714 in schemes >> 50776daec4 Trac #32757: last fixes for relint linter >> d95005e277 Trac #32756: fix E713 and E714 in combinat >> 60c6b1911d Trac #32755: fix E713 and E714 in rings >> 8a27526e7c Trac #32722: argcomplete should be a standard package >> bac0d56c89 Trac #32660: Add >> sage.rings.abc.{AlgebraicField,...,NumberField_quadratic}, deprecate >> is_AlgebraicField, ..., is_CyclotomicField, is_QuadraticField >> 7dd78eff36 Trac #2877: security risk -- restrict the input of eval in CC >> constructor >> cf1a7a533d Trac #32205: Removing deprecated parameters and methods in >> projective_ds >> 0574dae5f9 Trac #32635: sage.matrix.matrix_space: Import element classes >> on demand, fall back to generic on ImportError >> 61d9294bcd Trac #32743: use .pair() for quaternions instead of inlining >> the definition >> bf65712f5f Trac #32739: change order of indices in doc test of quantum >> determinant >> cd3aa6fbac Trac #32555: Typo in doc/en/developer/portability_testing.rst >> 72e76991cd Trac #32446: fix doctest formatting in >> schemes/elliptic_curves/ell_curve_isogeny.py >> 363c071d57 Trac #32632: computing elliptic-curve isomorphisms in >> characteristic 2 sometimes fails >> 9fdf3832f9 Trac #32630: Fix docstring in Polyhedron method >> representative_point >> a15c58c9d6 Trac #32582: Add colored Jones polynomial >> f35c2c81c3 Trac #17442: Italian translation of tutorial >> c1a55a62d1 Trac #32729: working on annotations in combinat >> 37afc35b18 Trac #32728: Get rid of <type in doctests and the mechanism >> that allows this >> d8e6aed16d Trac #32717: Move sage.functions.other.sqrt to >> sage.misc.functional >> 5ddfc23e0a Trac #32695: 5 internet doctests failing in >> src/sage/databases/oeis.py >> 753406109a Trac #32656: Eliminate psutil (memory management) dependency >> 04a39c6e1b Trac #29024: spkg-configure.m4 for singular >> 8ba7c02710 Trac #28207: Derivative of piecewise function returns junk >> b970bc92d1 Trac #32737: Fix doctest in src/sage/rings/integer.pyx >> ec536c7872 Trac #32495: EllipticCurveIsogeny._richcmp_ does not use the >> kernel polynomial >> 9750b0ef92 Trac #32490: multiplication_by_m_isogeny is only correct up to >> automorphism >> b6b1b25e77 Trac #32469: Improve ecl interface >> 7407db130b Trac #32445: Do not access M4RI internals >> 5e674821ad Trac #32440: shifting power series doesn't keep track of >> precision correctly >> bc6791f518 Trac #32430: remove obsolete code in >> EllipticCurveIsogeny.is_normalized() >> 225ac125f8 Trac #32723: Helper function to avoid duplicated code when >> using weights >> 1a9bb6d29d Trac #32680: more pycodestyle checks again >> 3c6a07afc9 Trac #32727: complete mpir deletion >> 56ec53a51b Trac #32712: sage.tensor.modules: make doctests involving SR >> optional >> 11684c278f Trac #32708: sage.tensor.modules: remove dependency on >> sage.manifolds >> a8e7da2709 Trac #32691: setuptools: Upgrade to 58.2.0, remove old >> easy_install patch >> 4e42232b97 Trac #32690: add factor method to interval-posets >> e87eb57a8e Trac #32685: Ill-placed y label in >> sage.manifolds.utilities.set_axes_labels >> 20e5ed68cc Trac #32684: various details in combinat and functions >> e75948b94e Trac #32637: Add sage.geometry.abc; remove uses of >> is_Polyhedron, is_LatticePolytope, is_Cone outside of sage.geometry >> 08d189cd3a Trac #32607: compatibility with gsl 2.7 >> fa012254ac Trac #32665: Deprecate is_[Callable]SymbolicExpressionRing, >> remove use of is_Symbolic{Equation,Variable}, is_CallableSymbolicExpression >> e7f6b13107 Trac #32649: Replace sage.doctest.external.has_* functions by >> Features >> aac663be0d Trac #32659: sdh_pip_install: Force reinstallation of built >> wheels; add sage_setup source deps >> 056b8d4e7b (tag: 9.5.beta4) Updated SageMath version to 9.5.beta4 >> >> -- You received this message because you are subscribed to the Google Groups "sage-release" group. 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