There is a new cddlib rpm for fedora which tries to solve the problem. It
doesn't for me but I am not sure if it is because I do something wrong,
since I get the same errors with former packages. Can someone else with
access to Fedora 40 make the test?
Anyway, I do not know how to proceed when a system package is updated. Must
sage be rebuilt? The exact steps would be helpful. Best, Enrique.
El sábado, 17 de agosto de 2024 a las 17:24:39 UTC+2, Enrique Artal
escribió:
> Sorry, I misunderstood and put the print in
> rings/polynomial/groebner_fan.py and put the output of the test of the
> changed function. I put now
>
> print("ans = ", ans)
> print('err = ', err)
> in interfaces/gfan.py and got
>
> ans = Q[x,y]
> {{
> x^2+1-y^2}
> ,
> {
> y^2-1-x^2}
> }
>
> err = Falling back on CddLib
> Falling back on CddLib
>
>
>
> El sábado, 17 de agosto de 2024 a las 14:23:55 UTC+2, Dima Pasechnik
> escribió:
>
>>
>>
>> On 17 August 2024 10:39:35 BST, Enrique Artal <[email protected]>
>> wrote:
>> >Sorry, with the spkg it is;
>> >b'{\n(3,7,1),\n(5,1,2),\n(7,1,4),\n(5,1,4),\n(1,1,1),\n(1,4,8),\n(1,4,10)}\n'
>> >
>>
>> >b'List of linked LP solvers:\n cddgmp\n cdd\n'
>> >[(3, 7, 1), (5, 1, 2), (7, 1, 4), (5, 1, 4), (1, 1, 1), (1, 4, 8), (1,
>> 4,
>> >10)]
>>
>> That is, no runtime error raised for you?
>> Or it comes later?
>>
>> >El sábado, 17 de agosto de 2024 a las 11:35:33 UTC+2, Enrique Artal
>> >escribió:
>> >
>> >> For the test in line 967 in
>> src/sage/rings/polynomial/groebner_basis.py,
>> >> after adding print(ans, err) to weight_vectors it gives
>> >> spkg: [(3, 7, 1), (5, 1, 2), (7, 1, 4), (5, 1, 4), (1, 1, 1), (1, 4,
>> 8),
>> >> (1, 4, 10)]
>> >> system:
>> b'{\n(3,7,1),\n(5,1,2),\n(7,1,4),\n(5,1,4),\n(1,1,1),\n(1,4,8),\n(1,4,10)}\n'
>>
>>
>> >> b'List of linked LP solvers:\n SoPlexCddGmp\n cddgmp\n cdd\n'
>> >> [(3, 7, 1), (5, 1, 2), (7, 1, 4), (5, 1, 4), (1, 1, 1), (1, 4, 8), (1,
>> 4,
>> >> 10)]
>> >>
>> >> El viernes, 16 de agosto de 2024 a las 22:58:22 UTC+2, Dima Pasechnik
>> >> escribió:
>> >>
>> >>>
>> >>>
>> >>> On 16 August 2024 19:39:02 BST, Enrique Artal <[email protected]>
>> >>> wrote:
>> >>> >Reported: https://bugzilla.redhat.com/show_bug.cgi?id=2305344
>> >>> >Already got a reply (and I do not know what to say):
>> >>> >
>> >>> >%%%%%%
>> >>> >The only important difference between the Fedora 39 and 40 cddlib
>> >>> package
>> >>> >builds is the addition of this upstream commit:
>> >>> >
>> >>>
>> https://github.com/cddlib/cddlib/commit/1210faf9ee9cf02e29fc67e11a8ea4e847c58ddd
>>
>> >>> >Does sagemath access cddlib from multiple threads and assume they
>> will
>> >>> >share data? %%%%%%
>> >>> >
>> >>> >El martes, 13 de agosto de 2024 a las 23:03:16 UTC+2,
>> >>> [email protected]
>> >>> >escribió:
>> >>> >
>> >>> >> I think it would be worth reporting it as a bug to Fedora.
>> >>> >>
>> >>> >> On Monday, August 12, 2024 at 9:26:18 AM UTC-7 [email protected]
>> >>> wrote:
>> >>> >>
>> >>> >>> I had similar errors with system cddlib also in Fedora 40 and
>> with a
>> >>> >>> previous version, see https://github.com/sagemath/sage/pull/38358;
>>
>> >>> >>> forcing the installation of the package, it works. I do not know
>> why.
>> >>> >>>
>> >>> >>> El lunes, 12 de agosto de 2024 a las 11:36:14 UTC+2,
>> >>> [email protected]
>> >>> >>> escribió:
>> >>> >>>
>> >>> >>>> On Fedora 40 I get
>> >>> >>>>
>> >>> >>>>
>> >>>
>> ----------------------------------------------------------------------
>> >>> >>>> sage -t --long --warn-long 29.7
>> >>> >>>> --random-seed=312965183184317696093439207698161157083
>> >>> src/sage/rings/pol
>> >>> >>>> ynomial/multi_polynomial_ideal.py # 1 doctest failed
>> >>> >>>> sage -t --long --warn-long 29.7
>> >>> >>>> --random-seed=312965183184317696093439207698161157083
>> >>> src/sage/rings/pol
>> >>> >>>> ynomial/groebner_fan.py # 47 doctests failed
>> >>> >>>>
>> >>>
>> ----------------------------------------------------------------------
>> >>> >>>> Those failures were already known in sage-10.4.rcx
>> >>> >>>>
>> >>> >>>> Doctesting 1 file.
>> >>> >>>> sage -t --long --warn-long 29.7
>> >>> >>>> --random-seed=312965183184317696093439207698161157083
>> >>> src/sage/rings/pol
>> >>> >>>> ynomial/multi_polynomial_ideal.py
>> >>> >>>>
>> >>>
>> **********************************************************************
>> >>> >>>> File "src/sage/rings/polynomial/multi_polynomial_ideal.py", line
>> >>> 4181,
>> >>> >>>> in sage.rings.polynomial.multi_po
>> >>> >>>> lynomial_ideal.NCPolynomialIdeal.groebner_fan
>> >>> >>>> Failed example:
>> >>> >>>> g.reduced_groebner_bases()
>> >>> >>>> Exception raised:
>> >>> >>>> Traceback (most recent call last):
>> >>> >>>> File
>> >>> >>>>
>> >>>
>> "/home/jaap/sagemath/sage-10.5.beta2/src/sage/rings/polynomial/groebner_fan.py",
>>
>>
>> >>>
>> >>> >>>> line 1057, i
>> >>> >>>> n reduced_groebner_bases
>> >>> >>>> return self.__reduced_groebner_bases
>> >>> >>>> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>> >>> >>>> AttributeError: 'GroebnerFan' object has no attribute
>> >>> >>>> '_GroebnerFan__reduced_groebner_bases'. Did yo
>> >>> >>>> u mean: '_GroebnerFan__is_groebner_basis'?
>> >>> >>>>
>> >>> >>>> During handling of the above exception, another exception
>> occurred:
>> >>> >>>>
>> >>> >>>> Traceback (most recent call last):
>> >>> >>>> File
>> >>> >>>>
>> >>>
>> "/home/jaap/sagemath/sage-10.5.beta2/src/sage/rings/polynomial/groebner_fan.py",
>>
>>
>> >>>
>> >>> >>>> line 1008, i
>> >>> >>>> n _gfan_reduced_groebner_bases
>> >>> >>>> return self.__gfan_reduced_groebner_bases
>> >>> >>>> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>> >>> >>>> AttributeError: 'GroebnerFan' object has no attribute
>> >>> >>>> '_GroebnerFan__gfan_reduced_groebner_bases'
>> >>> >>>>
>> >>> >>>> During handling of the above exception, another exception
>> occurred:
>> >>> >>>>
>> >>> >>>> Traceback (most recent call last):
>> >>> >>>> File
>> >>> >>>>
>> "/home/jaap/sagemath/sage-10.5.beta2/src/sage/doctest/forker.py",
>> >>> line 715,
>> >>> >>>> in _run
>> >>> >>>> self.compile_and_execute(example, compiler, test.globs)
>> >>> >>>> File
>> >>> >>>>
>> "/home/jaap/sagemath/sage-10.5.beta2/src/sage/doctest/forker.py",
>> >>> line
>> >>> >>>> 1145, in compile_and_e
>> >>> >>>> xecute
>> >>> >>>> exec(compiled, globs)
>> >>> >>>> File "<doctest
>> >>> >>>>
>> >>>
>> sage.rings.polynomial.multi_polynomial_ideal.NCPolynomialIdeal.groebner_fan[3]>",
>>
>>
>> >>>
>> >>> >>>> l
>> >>> >>>> ine 1, in <module>
>> >>> >>>> g.reduced_groebner_bases()
>> >>> >>>> File
>> >>> >>>>
>> >>>
>> "/home/jaap/sagemath/sage-10.5.beta2/src/sage/rings/polynomial/groebner_fan.py",
>>
>>
>> >>>
>> >>> >>>> line 1059, i
>> >>> >>>> n reduced_groebner_bases
>> >>> >>>> G = self._gfan_reduced_groebner_bases()
>> >>> >>>> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>> >>> >>>> File
>> >>> >>>>
>> >>>
>> "/home/jaap/sagemath/sage-10.5.beta2/src/sage/rings/polynomial/groebner_fan.py",
>>
>>
>> >>>
>> >>> >>>> line 1010, i
>> >>> >>>> n _gfan_reduced_groebner_bases
>> >>> >>>> B = self.gfan(cmd='bases')
>> >>> >>>> ^^^^^^^^^^^^^^^^^^^^^^
>> >>> >>>> File
>> >>> >>>>
>> >>>
>> "/home/jaap/sagemath/sage-10.5.beta2/src/sage/rings/polynomial/groebner_fan.py",
>>
>>
>> >>>
>> >>> >>>> line 1132, i
>> >>> >>>> n gfan
>> >>> >>>> s = gfan(I, cmd, verbose=self.__verbose)
>> >>> >>>> ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
>> >>> >>>> File
>> >>> >>>>
>> "/home/jaap/sagemath/sage-10.5.beta2/src/sage/misc/decorators.py",
>> >>> line
>> >>> >>>> 656, in wrapper
>> >>> >>>> return func(*args, **kwds)
>> >>> >>>> ^^^^^^^^^^^^^^^^^^^
>> >>> >>>> File
>> >>> >>>>
>> "/home/jaap/sagemath/sage-10.5.beta2/src/sage/interfaces/gfan.py",
>> >>> line
>> >>> >>>> 118, in __call__
>> >>> >>>> raise RuntimeError(err)
>> >>> >>>> RuntimeError: Falling back on CddLib
>> >>> >>>> Falling back on CddLib
>> >>>
>> >>> line 113 in this file, before the error is caught,
>> >>> is
>> >>> ans, err = gfan_processes.communicate(input=input)
>> >>>
>> >>> What `ans` and `err` do you get while running this test?
>> >>> (add a print and see, please)
>> >>>
>> >>>
>> >>>
>> >>>
>> >>>
>> >>>
>> >>> >>>>
>> >>> >>>>
>> >>>
>> **********************************************************************
>> >>> >>>> 1 item had failures:
>> >>> >>>> 1 of 5 in
>> >>> >>>>
>> >>>
>> sage.rings.polynomial.multi_polynomial_ideal.NCPolynomialIdeal.groebner_fan
>> >>> >>>> [986 tests, 1 failure, 3.74 s]
>> >>> >>>>
>> >>>
>> ----------------------------------------------------------------------
>> >>> >>>> sage -t --long --warn-long 29.7
>> >>> >>>> --random-seed=312965183184317696093439207698161157083
>> >>> src/sage/rings/pol
>> >>> >>>> ynomial/multi_polynomial_ideal.py # 1 doctest failed
>> >>> >>>>
>> >>>
>> ----------------------------------------------------------------------
>> >>> >>>> Total time for all tests: 4.3 seconds
>> >>> >>>> cpu time: 3.6 seconds
>> >>> >>>> cumulative wall time: 3.7 seconds
>> >>> >>>>
>> >>> >>>>
>> >>> >>>> Jaap
>> >>> >>>>
>> >>> >>>> On Sat, Aug 10, 2024 at 11:29 PM Volker Braun <
>> [email protected]>
>> >>> >>>> wrote:
>> >>> >>>>
>> >>> >>>>> As always, you can get the latest beta version from the
>> "develop"
>> >>> git
>> >>> >>>>> branch. Alternatively, the self-contained source tarball is at
>> >>> >>>>> http://www.sagemath.org/download-latest.html
>> >>> >>>>>
>> >>> >>>>>
>> >>> >>>>> e042294b5ed (HEAD -> develop, tag: 10.5.beta2, github/develop)
>> >>> Updated
>> >>> >>>>> SageMath version to 10.5.beta2
>> >>> >>>>> b178c10a740 (origin/develop) gh-38492: expose fplll enumeration
>> >>> >>>>> routines in IntegralLattice
>> >>> >>>>> 8587c1351b7 gh-38479: Choose special name to avoid '@c' by
>> >>> singular's
>> >>> >>>>> absFactorize
>> >>> >>>>> 95a580db85e gh-38476: Include modular composition for
>> polynomial
>> >>> rings
>> >>> >>>>> over finite fields
>> >>> >>>>> cac6e29f1a8 gh-38470: `build/pkgs/furo`: Set lower bound
>> >>> >>>>> 6522292ad72 gh-38466: introduce half-angle transformations
>> >>> >>>>> 80ba1d5955c gh-38458: simplify conversion code in cubic Hecke
>> >>> >>>>> 7c41ea58284 gh-38444: Moving ideal methods to category of rings
>> >>> >>>>> b20628a403f gh-38442: `build/pkgs/gcc`: Update to 13.3
>> >>> >>>>> a58fd635e62 gh-38433: Make # abs tol compare over the complex
>> >>> numbers
>> >>> >>>>> 896eee58941 gh-38432: fix memory leak in is_planar
>> >>> >>>>> cee79e3abe2 gh-38414: Properly check dimension in curve
>> constructor
>> >>> >>>>> ce92b938f24 gh-38409: `xgcd` for multiple arguments
>> >>> >>>>> d83f90cfafc gh-38395: get rid of some sage-eval in gap3-related
>> >>> code
>> >>> >>>>> f369f6576f5 gh-38347: support passing two base points to .log()
>> for
>> >>> >>>>> elliptic-curve points
>> >>> >>>>> 8abb61cab64 gh-38331: use pkg-config to find msolve, otherwise
>> try
>> >>> to
>> >>> >>>>> run it
>> >>> >>>>> 66f679d6f29 gh-38330: Lattes to curve function code commits for
>> >>> >>>>> enhancement #38329
>> >>> >>>>> 8d9da51214c gh-38323: some fixes for ruff code C41 (about loops
>> and
>> >>> >>>>> iteration)
>> >>> >>>>> 5be4da7b396 gh-38296: Deprecate `is_SchemeMorphism`,
>> >>> >>>>> `is_SchemeTopologicalPoint`
>> >>> >>>>> 095e6ee6579 gh-38273: Update the deprecation policy
>> >>> >>>>> a1deb75ea13 gh-38185: Simplify doc build process by removing
>> empty
>> >>> >>>>> directories locally
>> >>> >>>>> 27c9b02a90e gh-37372: Strength 2 Covering Array constructions
>> >>> >>>>> 0f3477394fb (tag: 10.5.beta1) Updated SageMath version to
>> >>> 10.5.beta1
>> >>> >>>>>
>> >>> >>>>> --
>> >>> >>>>> You received this message because you are subscribed to the
>> Google
>> >>> >>>>> Groups "sage-release" group.
>> >>> >>>>> To unsubscribe from this group and stop receiving emails from
>> it,
>> >>> send
>> >>> >>>>> an email to [email protected].
>> >>> >>>>> To view this discussion on the web visit
>> >>> >>>>>
>> >>>
>> https://groups.google.com/d/msgid/sage-release/07e44a5e-b281-45b4-b225-f62bdde24f72n%40googlegroups.com
>>
>> >>> >>>>> <
>> >>>
>> https://groups.google.com/d/msgid/sage-release/07e44a5e-b281-45b4-b225-f62bdde24f72n%40googlegroups.com?utm_medium=email&utm_source=footer>
>>
>>
>> >>>
>> >>> >>>>> .
>> >>> >>>>>
>> >>> >>>>
>> >>> >
>> >>>
>> >>
>> >
>>
>
--
You received this message because you are subscribed to the Google Groups
"sage-release" group.
To unsubscribe from this group and stop receiving emails from it, send an email
to [email protected].
To view this discussion on the web visit
https://groups.google.com/d/msgid/sage-release/43826c08-3696-4a55-8cee-051648cc916an%40googlegroups.com.
