I've created https://github.com/sagemath/sage/pull/38667

On Monday, September 16, 2024 at 11:18:06 AM UTC+2 Antonio Rojas wrote:

> This is caused by malformed toml code introduced in 
> https://github.com/sagemath/sage/pull/38577
>
> El lunes, 16 de septiembre de 2024 a las 10:55:19 UTC+2, 
> [email protected] escribió:
>
> I have the following issue at the end of an incremental update on macOS 
> 14.6.1 (M1).
> I observe the same error on Fedora 39.
> I don’t know what to do with it.
> I can start sage (10.5.beta4) in a shell and it seems ok.
> Best,
> David.
>
> ==================================================================
> ….
>
> [sagelib-10.5.beta4] [spkg-install]     Installing sage-python script to 
> /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/bin
>
> [sagelib-10.5.beta4] [spkg-install]     Installing sage-run script to 
> /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/bin
>
> [sagelib-10.5.beta4] [spkg-install]     Installing sage-run-cython script 
> to /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/bin
>
> [sagelib-10.5.beta4] [spkg-install]     Installing sage-startuptime.py 
> script to /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/bin
>
> [sagelib-10.5.beta4] [spkg-install]     Installing sage-update-version 
> script to /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/bin
>
> [sagelib-10.5.beta4] [spkg-install] 
>
> [sagelib-10.5.beta4] [spkg-install]     Installed /Users/dcoudert/sage/src
>
> [sagelib-10.5.beta4] [spkg-install] Successfully installed 
> sagemath-standard
>
> [sagelib-10.5.beta4] Moving package files from temporary location 
> /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/tmp/sage/build/sagelib-10.5.beta4/inst
>  
> to /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9
>
> [sagelib-10.5.beta4] Deleting build directory 
> /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/tmp/sage/build/sagelib-10.5.beta4
>
> [sagelib-10.5.beta4] Finished installing sagelib-10.5.beta4
>
> [sagelib-10.5.beta4] real 0m21.017s user 0m8.042s sys 0m3.618s
>
> make --no-print-directory sagemath_environment-SAGE_VENV-no-deps
>
> [sagemath_environment-10.5.beta4] Setting up build directory 
> /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/tmp/sage/build/sagemath_environment-10.5.beta4
>
> [sagemath_environment-10.5.beta4] Host system: Darwin MAC-04017247 23.6.0 
> Darwin Kernel Version 23.6.0: Mon Jul 29 21:14:30 PDT 2024; 
> root:xnu-10063.141.2~1/RELEASE_ARM64_T6000 arm64
>
> [sagemath_environment-10.5.beta4] C compiler: gcc, Apple clang version 
> 15.0.0 (clang-1500.3.9.4), Target: arm64-apple-darwin23.6.0, Thread model: 
> posix, InstalledDir: 
> /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin
>
> [sagemath_environment-10.5.beta4] No stamp file for package 
> 'sagemath_environment' in 
> /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/lib/sage/installed
>
> [sagemath_environment-10.5.beta4] No spkg-legacy-uninstall script; nothing 
> to do
>
> [sagemath_environment-10.5.beta4] [spkg-install] * Creating isolated 
> environment: venv+pip...
>
> [sagemath_environment-10.5.beta4] [spkg-install] ERROR Failed to parse 
> ./pyproject.toml: Invalid initial character for a key part (at line 32, 
> column 79) 
>
> [sagemath_environment-10.5.beta4] [spkg-install] Warning: building with 
> "python3 -m build  --outdir=dist   ." failed.
>
> [sagemath_environment-10.5.beta4] [spkg-install] Retrying with "python3 -m 
> build  --outdir=dist --no-isolation --skip-dependency-check  .".
>
> [sagemath_environment-10.5.beta4] [spkg-install] ERROR Failed to parse 
> ./pyproject.toml: Invalid initial character for a key part (at line 32, 
> column 79) 
>
> [sagemath_environment-10.5.beta4] [spkg-install] 
> ********************************************************************************
>
> [sagemath_environment-10.5.beta4] [spkg-install] Error building a wheel 
> for sagemath_environment-10.5.beta4
>
> [sagemath_environment-10.5.beta4] [spkg-install] 
> ********************************************************************************
>
> [sagemath_environment-10.5.beta4] 
> ************************************************************************
>
> [sagemath_environment-10.5.beta4] Error installing package 
> sagemath_environment-10.5.beta4
>
> [sagemath_environment-10.5.beta4] 
> ************************************************************************
>
> [sagemath_environment-10.5.beta4] Please email sage-devel (
> http://groups.google.com/group/sage-devel)
>
> [sagemath_environment-10.5.beta4] explaining the problem and including the 
> log files
>
> [sagemath_environment-10.5.beta4]   
> /Users/dcoudert/sage/logs/pkgs/sagemath_environment-10.5.beta4.log
>
> [sagemath_environment-10.5.beta4] and
>
> [sagemath_environment-10.5.beta4]   /Users/dcoudert/sage/config.log
>
> [sagemath_environment-10.5.beta4] Describe your computer, operating 
> system, etc.
>
> [sagemath_environment-10.5.beta4] If you want to try to fix the problem 
> yourself, *don't* just cd to
>
> [sagemath_environment-10.5.beta4] 
> /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/tmp/sage/build/sagemath_environment-10.5.beta4
>  
> and type 'make' or whatever is appropriate.
>
> [sagemath_environment-10.5.beta4] Instead, the following commands setup 
> all environment variables
>
> [sagemath_environment-10.5.beta4] correctly and load a subshell for you to 
> debug the error:
>
> [sagemath_environment-10.5.beta4]   (cd 
> '/Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/tmp/sage/build/sagemath_environment-10.5.beta4'
>  
> && '/Users/dcoudert/sage/sage' --buildsh)
>
> [sagemath_environment-10.5.beta4] When you are done debugging, you can 
> type "exit" to leave the subshell.
>
> [sagemath_environment-10.5.beta4] 
> ************************************************************************
>
> make[4]: *** [sagemath_environment-SAGE_VENV-no-deps] Error 1
>
> make[3]: *** 
> [/Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/lib/sage/installed/sagemath_environment-10.5.beta4]
>  
> Error 2
>
> make[2]: *** [all-build] Error 2
>
> ***************************************************************
>
> Error building Sage.
>
>
> The following package(s) may have failed to build (not necessarily
>
> during this run of 'make all-build'):
>
>
> * package:         sagemath_environment-10.5.beta4
>
>   last build time: 16 sep 10:48
>
>   log file:        
> /Users/dcoudert/sage/logs/pkgs/sagemath_environment-10.5.beta4.log
>
>
> It is safe to delete any log files and build directories, but they
>
> contain information that is helpful for debugging build problems.
>
> WARNING: If you now run 'make' again, the build directory of the
>
> same version of the package will, by default, be deleted. Set the
>
> environment variable SAGE_KEEP_BUILT_SPKGS=yes to prevent this.
>
>
> real 0m41.584s user 0m9.791s sys 0m5.603s
>
> make[1]: *** [all-build] Error 1
>
> make: *** [build] Error 2
>
> ==================================================================
>
>
>
>
> Le 16 sept. 2024 à 00:30, Volker Braun <[email protected]> a écrit :
>
> As always, you can get the latest beta version from the "develop" git 
> branch. Alternatively, the self-contained source tarball is at 
> http://www.sagemath.org/download-latest.html
>
>
> a880b3f2d99 (tag: 10.5.beta4, github/develop) Updated SageMath version to 
> 10.5.beta4
> 27fce1faa78 gh-38646: add typing annotation in temporary_file
> c82c5099a7e gh-38644: pathlib in simplicial sets examples
> 94741f9cb9e gh-38638: interface to new nauty generator for Hasse diagrams
> c0e0c378de8 gh-38636: fix something in quadratic forms
> 34d32dd03c8 gh-38635: fixing most ruff PERF4 warnings in combinat
> 4a9c985b769 gh-38628: Fix hypellfrob.pyx calling Python inside sig_on
> c6463204b83 gh-38627: Require weaker Sphinx dependency for sagelib
> caa5174974d gh-38625: Remove outdated setting of `sphinx_source_suffix`
> 72f2e28765f gh-38624: Fix issue report formatting
> 7ba90e10e8f gh-38622: pep8 fixes in schemes/toric
> 2015ab21b5c gh-38621: switch from `genbg` to `genbgL` in `nauty_genbg` to 
> generate larger bipartite graphs.
> 1e57fe2cb97 gh-38620: cleaning the deprecation and removal of 
> NoetherianRing class
> bcedc6aa1e5 gh-38619: Re-add py3.9 support to sage_autodoc.py
> 011111cde42 gh-38616: `structure/sage_object.pyx`: remove excess `%s`s
> 05db5cdeb65 gh-38615:  `permgroup_element.pyx`: add some `const`s
> 884dded847d gh-38614: some pep8 fixes in combinat/designs
> e9f546b2d36 gh-38613: `categories/morphism.pyx`: remove some `noexcept`s
> de3035af74a gh-38612: pep8 cleanup in algebras
> 21b99b27cbe gh-38611: pep and ruff cleanup in semirings and tropicals
> 488b258cbd6 gh-38610: fix and activate E303 check in pyx files
> 6e6e84d5df1 gh-38609: fix the linter
> abcf4a6011f gh-38608: Add warning filter for DeprecationWarning while doc 
> build
> ae77953f729 gh-38602: Allow for python sets to be counted as sets
> 92725c7c4f4 gh-38598: Add reflection_index_set() and reflection() methods 
> for permutations
> 06495417f3c gh-38592: Add is_integral method to algebraic numbers
> 189a4a1122b gh-38585: adding a warning about iteration over words
> 05788941c3f gh-38581: README.md, src/doc/en/installation: Replace release 
> tours links
> ab35cb8eb56 gh-38577: Add various project URLs for PyPI
> 800c2279d7b gh-38576: `crypto/sbox.pyx`: remove unreachable code
> 483591122e8 gh-38575: Fix `is_homogeneous` weight bug
> b3266925efa gh-38572: `build/pkgs/nauty`: Update to 2.8.9
> 558157ecda5 gh-38571: `build/pkgs/primecount` 7.14, `primesieve`: 12.4
> 468d3ee1f3b gh-38568: Right align sage/python tabs and alter vertical 
> spacing
> 8f82c5279b3 gh-38558: `build/pkgs/python3`: Update to 3.12.5
> 1876c2cda09 gh-38548: `build/pkgs/pip` 24.2, `setuptools` 73.0.1 etc.
> 10bb5148d24 gh-38542: Fixes in pyx files
> c7bbcb463b1 gh-38539: some details in strassen.pyx
> 1aad5fb6097 gh-38532: `build/pkgs/jupyter_jsmol`: Change to optional
> 9a30984ed16 gh-38504: Demote `jmol` to optional
> 280d51140c7 gh-38501: `build/pkgs/cython`: Update to 3.0.11
> 473a5712f69 gh-38435: add method `is_edge_cut` to graphs
> 76fbb6cc8a5 gh-38341: Implement EllipticCurve_with_prime_order() 
> constructor
> 2270e23a8d9 gh-38299: graphs: add implementation of slice decomposition 
> via an extended LexBFS algorithm
> 2a4f6e127a7 gh-37821: Fix category of ModularFormsRing and documentation 
> cleanup
> d1fe4120a99 gh-37569: Repair `sage -t --valgrind`
> 24698e7e7ec (tag: 10.5.beta3) Updated SageMath version to 10.5.beta3
>
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