On Ubuntu 24.04running under WSL2/Windows11 on core i7 = 32 GB rAM; upgrading 10.5.beta3 to 10.5.beta4 and running ptestlong gives two transient failures : sage -t --long --warn-long 92.0 --random-seed=215891992822319941402876332559304583711 src/sage/plot/animate.py # 1 doctest failed sage -t --long --warn-long 92.0 --random-seed=215891992822319941402876332559304583711 src/sage/rings/real_mpfr.pyx # 1 doctest failed
(both are timeouts) and two permanent failures : sage -t --long --warn-long 92.0 --random-seed=215891992822319941402876332559304583711 src/sage/plot/animate.py # 1 doctest failed sage -t --long --warn-long 92.0 --random-seed=215891992822319941402876332559304583711 src/sage/rings/real_mpfr.pyx # 1 doctest failed The second one has been reported a few times. The first one is new, and seems genuine ; re-running it gives : charpent@SAP5342949:/usr/local/sage-10$ sage -t --long --warn-long 92.0 --random-seed=215891992822319941402876332559304583711 src/sage/combinat/tiling.py # 1 doctest failed Running doctests with ID 2024-09-18-12-14-14-5faac000. Git branch: develop Git ref: a880b3f2d99 Running with SAGE_LOCAL='/usr/local/sage-10/local' and SAGE_VENV='/usr/local/sage-10/local/var/lib/sage/venv-python3.12' Using --optional=debian,dot2tex,fricas,gap_jupyter,gap_packages,jmol,jupyter_jsmol,libsemigroups,msolve,pip,pysingular,sage,sage_spkg,singular_jupyter Features to be detected: 4ti2,SAGE_SRC,benzene,bliss,buckygen,conway_polynomials,coxeter3,csdp,cvxopt,cvxopt,database_cremona_ellcurve,database_cremona_mini_ellcurve,database_cubic_hecke,database_ellcurves,database_graphs,database_jones_numfield,database_knotinfo,dvipng,ecm,fpylll,fricas,gap_package_atlasrep,gap_package_design,gap_package_grape,gap_package_guava,gap_package_hap,gap_package_polycyclic,gap_package_qpa,gap_package_quagroup,gfan,glucose,graphviz,imagemagick,ipython,jmol,jupymake,jupyter_sphinx,kenzo,kissat,latte_int,lrcalc_python,lrslib,mathics,matroid_database,mcqd,meataxe,mpmath,msolve,nauty,networkx,numpy,palp,pandoc,pdf2svg,pdftocairo,pexpect,phitigra,pillow,plantri,polytopes_db,polytopes_db_4d,pplpy,primecountpy,ptyprocess,pycosat,pycryptosat,pynormaliz,pyparsing,python_igraph,requests,rpy2,rubiks,sage.combinat,sage.geometry.polyhedron,sage.graphs,sage.groups,sage.libs.braiding,sage.libs.ecl,sage.libs.flint,sage.libs.gap,sage.libs.homfly,sage.libs.linbox,sage.libs.m4ri,sage.libs.ntl,sage.libs.pari,sage.libs.singular,sage.misc.cython,sage.modular,sage.modules,sage.numerical.mip,sage.plot,sage.rings.complex_double,sage.rings.finite_rings,sage.rings.function_field,sage.rings.number_field,sage.rings.padics,sage.rings.polynomial.pbori,sage.rings.real_double,sage.rings.real_mpfr,sage.sat,sage.schemes,sage.symbolic,sage_numerical_backends_coin,sagemath_doc_html,scipy,singular,sirocco,sphinx,symengine_py,sympy,tdlib,threejs,topcom Doctesting 1 file. sage -t --long --warn-long 92.0 --random-seed=215891992822319941402876332559304583711 src/sage/combinat/tiling.py ********************************************************************** File "src/sage/combinat/tiling.py", line 2393, in sage.combinat.tiling.TilingSolver.animate Failed example: a # long time (2s), optional - imagemagick, needs sage.plot Expected: Animation with 123 frames Got: Command "['convert', '-dispose', 'Background', '-delay', '20', '-loop', '0', '*.png', '/tmp/tmpoei9tb2p/tmp_el93p2rx.gif']" returned nonzero exit status "1" (with stderr "convert-im6.q16: time limit exceeded `/tmp/tmpoei9tb2p/tmp_el93p2rx.gif' @ fatal/cache.c/GetImagePixelCache/1867." and stdout ""). doctest:warning File "<doctest sage.combinat.tiling.TilingSolver.animate[8]>", line 1, in <module> a # long time (2s), optional - imagemagick, needs sage.plot File "/usr/local/sage-10/src/sage/repl/rich_output/display_manager.py", line 799, in displayhook plain_text, rich_output = self._rich_output_formatter(obj, dict()) File "/usr/local/sage-10/src/sage/repl/rich_output/display_manager.py", line 621, in _rich_output_formatter rich_output = self._call_rich_repr(obj, rich_repr_kwds) File "/usr/local/sage-10/src/sage/repl/rich_output/display_manager.py", line 586, in _call_rich_repr warnings.warn( File "/usr/lib/python3.12/warnings.py", line 110, in _showwarnmsg sw(msg.message, msg.category, msg.filename, msg.lineno, : sage.repl.rich_output.display_manager.RichReprWarning: Exception in _rich_repr_ while displaying object: Error: Cannot generate GIF animation. The magick/convert command (ImageMagick) is present but does not seem to be functional. Verify that the objects passed to the animate command can be saved in PNG image format. See www.imagemagick.org more information. Animation with 123 frames ********************************************************************** 1 item had failures: 1 of 12 in sage.combinat.tiling.TilingSolver.animate [492 tests, 1 failure, 98.50 s] ---------------------------------------------------------------------- sage -t --long --warn-long 92.0 --random-seed=215891992822319941402876332559304583711 src/sage/combinat/tiling.py # 1 doctest failed ---------------------------------------------------------------------- Total time for all tests: 98.6 seconds cpu time: 85.8 seconds cumulative wall time: 98.5 seconds Features detected for doctesting: imagemagick,sage.combinat,sage.modules,sage.plot HTH, Le lundi 16 septembre 2024 à 10:55:19 UTC+2, [email protected] a écrit : > I have the following issue at the end of an incremental update on macOS > 14.6.1 (M1). > I observe the same error on Fedora 39. > I don’t know what to do with it. > I can start sage (10.5.beta4) in a shell and it seems ok. > Best, > David. > > ================================================================== > …. > > [sagelib-10.5.beta4] [spkg-install] Installing sage-python script to > /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/bin > > [sagelib-10.5.beta4] [spkg-install] Installing sage-run script to > /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/bin > > [sagelib-10.5.beta4] [spkg-install] Installing sage-run-cython script > to /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/bin > > [sagelib-10.5.beta4] [spkg-install] Installing sage-startuptime.py > script to /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/bin > > [sagelib-10.5.beta4] [spkg-install] Installing sage-update-version > script to /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/bin > > [sagelib-10.5.beta4] [spkg-install] > > [sagelib-10.5.beta4] [spkg-install] Installed /Users/dcoudert/sage/src > > [sagelib-10.5.beta4] [spkg-install] Successfully installed > sagemath-standard > > [sagelib-10.5.beta4] Moving package files from temporary location > /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/tmp/sage/build/sagelib-10.5.beta4/inst > > to /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9 > > [sagelib-10.5.beta4] Deleting build directory > /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/tmp/sage/build/sagelib-10.5.beta4 > > [sagelib-10.5.beta4] Finished installing sagelib-10.5.beta4 > > [sagelib-10.5.beta4] real 0m21.017s user 0m8.042s sys 0m3.618s > > make --no-print-directory sagemath_environment-SAGE_VENV-no-deps > > [sagemath_environment-10.5.beta4] Setting up build directory > /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/tmp/sage/build/sagemath_environment-10.5.beta4 > > [sagemath_environment-10.5.beta4] Host system: Darwin MAC-04017247 23.6.0 > Darwin Kernel Version 23.6.0: Mon Jul 29 21:14:30 PDT 2024; > root:xnu-10063.141.2~1/RELEASE_ARM64_T6000 arm64 > > [sagemath_environment-10.5.beta4] C compiler: gcc, Apple clang version > 15.0.0 (clang-1500.3.9.4), Target: arm64-apple-darwin23.6.0, Thread model: > posix, InstalledDir: > /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin > > [sagemath_environment-10.5.beta4] No stamp file for package > 'sagemath_environment' in > /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/lib/sage/installed > > [sagemath_environment-10.5.beta4] No spkg-legacy-uninstall script; nothing > to do > > [sagemath_environment-10.5.beta4] [spkg-install] * Creating isolated > environment: venv+pip... > > [sagemath_environment-10.5.beta4] [spkg-install] ERROR Failed to parse > ./pyproject.toml: Invalid initial character for a key part (at line 32, > column 79) > > [sagemath_environment-10.5.beta4] [spkg-install] Warning: building with > "python3 -m build --outdir=dist ." failed. > > [sagemath_environment-10.5.beta4] [spkg-install] Retrying with "python3 -m > build --outdir=dist --no-isolation --skip-dependency-check .". > > [sagemath_environment-10.5.beta4] [spkg-install] ERROR Failed to parse > ./pyproject.toml: Invalid initial character for a key part (at line 32, > column 79) > > [sagemath_environment-10.5.beta4] [spkg-install] > ******************************************************************************** > > [sagemath_environment-10.5.beta4] [spkg-install] Error building a wheel > for sagemath_environment-10.5.beta4 > > [sagemath_environment-10.5.beta4] [spkg-install] > ******************************************************************************** > > [sagemath_environment-10.5.beta4] > ************************************************************************ > > [sagemath_environment-10.5.beta4] Error installing package > sagemath_environment-10.5.beta4 > > [sagemath_environment-10.5.beta4] > ************************************************************************ > > [sagemath_environment-10.5.beta4] Please email sage-devel ( > http://groups.google.com/group/sage-devel) > > [sagemath_environment-10.5.beta4] explaining the problem and including the > log files > > [sagemath_environment-10.5.beta4] > /Users/dcoudert/sage/logs/pkgs/sagemath_environment-10.5.beta4.log > > [sagemath_environment-10.5.beta4] and > > [sagemath_environment-10.5.beta4] /Users/dcoudert/sage/config.log > > [sagemath_environment-10.5.beta4] Describe your computer, operating > system, etc. > > [sagemath_environment-10.5.beta4] If you want to try to fix the problem > yourself, *don't* just cd to > > [sagemath_environment-10.5.beta4] > /Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/tmp/sage/build/sagemath_environment-10.5.beta4 > > and type 'make' or whatever is appropriate. > > [sagemath_environment-10.5.beta4] Instead, the following commands setup > all environment variables > > [sagemath_environment-10.5.beta4] correctly and load a subshell for you to > debug the error: > > [sagemath_environment-10.5.beta4] (cd > '/Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/tmp/sage/build/sagemath_environment-10.5.beta4' > > && '/Users/dcoudert/sage/sage' --buildsh) > > [sagemath_environment-10.5.beta4] When you are done debugging, you can > type "exit" to leave the subshell. > > [sagemath_environment-10.5.beta4] > ************************************************************************ > > make[4]: *** [sagemath_environment-SAGE_VENV-no-deps] Error 1 > > make[3]: *** > [/Users/dcoudert/sage/local/var/lib/sage/venv-python3.9/var/lib/sage/installed/sagemath_environment-10.5.beta4] > > Error 2 > > make[2]: *** [all-build] Error 2 > > *************************************************************** > > Error building Sage. > > > The following package(s) may have failed to build (not necessarily > > during this run of 'make all-build'): > > > * package: sagemath_environment-10.5.beta4 > > last build time: 16 sep 10:48 > > log file: > /Users/dcoudert/sage/logs/pkgs/sagemath_environment-10.5.beta4.log > > > It is safe to delete any log files and build directories, but they > > contain information that is helpful for debugging build problems. > > WARNING: If you now run 'make' again, the build directory of the > > same version of the package will, by default, be deleted. Set the > > environment variable SAGE_KEEP_BUILT_SPKGS=yes to prevent this. > > > real 0m41.584s user 0m9.791s sys 0m5.603s > > make[1]: *** [all-build] Error 1 > > make: *** [build] Error 2 > > ================================================================== > > > > > Le 16 sept. 2024 à 00:30, Volker Braun <[email protected]> a écrit : > > As always, you can get the latest beta version from the "develop" git > branch. Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html > > > a880b3f2d99 (tag: 10.5.beta4, github/develop) Updated SageMath version to > 10.5.beta4 > 27fce1faa78 gh-38646: add typing annotation in temporary_file > c82c5099a7e gh-38644: pathlib in simplicial sets examples > 94741f9cb9e gh-38638: interface to new nauty generator for Hasse diagrams > c0e0c378de8 gh-38636: fix something in quadratic forms > 34d32dd03c8 gh-38635: fixing most ruff PERF4 warnings in combinat > 4a9c985b769 gh-38628: Fix hypellfrob.pyx calling Python inside sig_on > c6463204b83 gh-38627: Require weaker Sphinx dependency for sagelib > caa5174974d gh-38625: Remove outdated setting of `sphinx_source_suffix` > 72f2e28765f gh-38624: Fix issue report formatting > 7ba90e10e8f gh-38622: pep8 fixes in schemes/toric > 2015ab21b5c gh-38621: switch from `genbg` to `genbgL` in `nauty_genbg` to > generate larger bipartite graphs. > 1e57fe2cb97 gh-38620: cleaning the deprecation and removal of > NoetherianRing class > bcedc6aa1e5 gh-38619: Re-add py3.9 support to sage_autodoc.py > 011111cde42 gh-38616: `structure/sage_object.pyx`: remove excess `%s`s > 05db5cdeb65 gh-38615: `permgroup_element.pyx`: add some `const`s > 884dded847d gh-38614: some pep8 fixes in combinat/designs > e9f546b2d36 gh-38613: `categories/morphism.pyx`: remove some `noexcept`s > de3035af74a gh-38612: pep8 cleanup in algebras > 21b99b27cbe gh-38611: pep and ruff cleanup in semirings and tropicals > 488b258cbd6 gh-38610: fix and activate E303 check in pyx files > 6e6e84d5df1 gh-38609: fix the linter > abcf4a6011f gh-38608: Add warning filter for DeprecationWarning while doc > build > ae77953f729 gh-38602: Allow for python sets to be counted as sets > 92725c7c4f4 gh-38598: Add reflection_index_set() and reflection() methods > for permutations > 06495417f3c gh-38592: Add is_integral method to algebraic numbers > 189a4a1122b gh-38585: adding a warning about iteration over words > 05788941c3f gh-38581: README.md, src/doc/en/installation: Replace release > tours links > ab35cb8eb56 gh-38577: Add various project URLs for PyPI > 800c2279d7b gh-38576: `crypto/sbox.pyx`: remove unreachable code > 483591122e8 gh-38575: Fix `is_homogeneous` weight bug > b3266925efa gh-38572: `build/pkgs/nauty`: Update to 2.8.9 > 558157ecda5 gh-38571: `build/pkgs/primecount` 7.14, `primesieve`: 12.4 > 468d3ee1f3b gh-38568: Right align sage/python tabs and alter vertical > spacing > 8f82c5279b3 gh-38558: `build/pkgs/python3`: Update to 3.12.5 > 1876c2cda09 gh-38548: `build/pkgs/pip` 24.2, `setuptools` 73.0.1 etc. > 10bb5148d24 gh-38542: Fixes in pyx files > c7bbcb463b1 gh-38539: some details in strassen.pyx > 1aad5fb6097 gh-38532: `build/pkgs/jupyter_jsmol`: Change to optional > 9a30984ed16 gh-38504: Demote `jmol` to optional > 280d51140c7 gh-38501: `build/pkgs/cython`: Update to 3.0.11 > 473a5712f69 gh-38435: add method `is_edge_cut` to graphs > 76fbb6cc8a5 gh-38341: Implement EllipticCurve_with_prime_order() > constructor > 2270e23a8d9 gh-38299: graphs: add implementation of slice decomposition > via an extended LexBFS algorithm > 2a4f6e127a7 gh-37821: Fix category of ModularFormsRing and documentation > cleanup > d1fe4120a99 gh-37569: Repair `sage -t --valgrind` > 24698e7e7ec (tag: 10.5.beta3) Updated SageMath version to 10.5.beta3 > > -- > You received this message because you are subscribed to the Google Groups > "sage-release" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to [email protected]. > To view this discussion on the web visit > https://groups.google.com/d/msgid/sage-release/42270033-04d9-4a29-afcb-ad56ee60abb9n%40googlegroups.com > > <https://groups.google.com/d/msgid/sage-release/42270033-04d9-4a29-afcb-ad56ee60abb9n%40googlegroups.com?utm_medium=email&utm_source=footer> > . > > > -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to [email protected]. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/86040b3d-6447-436a-847e-536d1c89d7bbn%40googlegroups.com.
