#13541: update scipy to 0.11.0
---------------------------------+------------------------------------------
       Reporter:  jhpalmieri     |         Owner:  tbd              
           Type:  enhancement    |        Status:  positive_review  
       Priority:  major          |     Milestone:  sage-5.5         
      Component:  packages       |    Resolution:                   
       Keywords:                 |   Work issues:                   
Report Upstream:  N/A            |     Reviewers:  Dmitrii Pasechnik
        Authors:  John Palmieri  |     Merged in:                   
   Dependencies:                 |      Stopgaps:                   
---------------------------------+------------------------------------------

Old description:

> Version 0.11.0 of scipy was released on September 26, 2012. We should
> update: among other things, the new version builds out of the box on OS X
> Lion and OS X Mountain Lion.
>
> The new version has two changes which affect doctests and Sage library
> code:
>
> - the "order" argument for the Pade approximation for matrix
> exponentiation has been deprecated and no longer has any effect (except
> to print a deprecation message). So this requires fixing a doctest or
> two. I also removed any use of this argument from the Sage code.
>
> - the function `stats.ttest_ind` seems to return its output in a slightly
> different format. So another doctest needs to be changed.
>
> New spkg:
> [http://sage.math.washington.edu/home/palmieri/SPKG/scipy-0.11.0.spkg]

New description:

 Version 0.11.0 of scipy was released on September 26, 2012. We should
 update: among other things, the new version builds out of the box on OS X
 Lion and OS X Mountain Lion.

 The new version has two changes which affect doctests and Sage library
 code:

 - the "order" argument for the Pade approximation for matrix
 exponentiation has been deprecated and no longer has any effect (except to
 print a deprecation message). So this requires fixing a doctest or two. I
 also removed any use of this argument from the Sage code.

 - the function `stats.ttest_ind` seems to return its output in a slightly
 different format. So another doctest needs to be changed.

 '''spkg''':
 [http://sage.math.washington.edu/home/palmieri/SPKG/scipy-0.11.0.spkg]

 '''Apply''': [attachment:trac_13541-doctest.patch]

--

Comment (by jdemeyer):

 I assume the Sage library patch must be applied too?

-- 
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/13541#comment:5>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica, 
and MATLAB

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