#14706: Upgrade R to version 3.0.1
-------------------------------------+-------------------------------------
       Reporter:  charpent           |        Owner:  jdemeyer
           Type:  enhancement        |       Status:  needs_work
       Priority:  major              |    Milestone:  sage-5.13
      Component:  packages:          |   Resolution:
  standard                           |    Merged in:
       Keywords:  r-project spkg     |    Reviewers:  Leif Leonhardy, Karl-
        Authors:  Emmanuel           |  Dieter Crisman, Jeroen Demeyer
  Charpentier, Jean-Pierre Flori     |  Work issues:
Report Upstream:  N/A                |       Commit:
         Branch:                     |     Stopgaps:
   Dependencies:                     |
-------------------------------------+-------------------------------------

Old description:

> '''New spkg''':
> [http://boxen.math.washington.edu/home/jdemeyer/spkg/r-3.0.1.p1.spkg]
>
> === r-3.0.1.p1 (Jean-Pierre Flori, 10 June 2013) ===
>  * #14706: Use --disable-long-double on Cygwin rather than patching.
>  * Add sqrtl.patch from upstream to make --disable-long-double work.
>
> === r-3.0.1.p0 (Emmanuel Charpentier, 8 June 2013) ===
>  * #14706: Drop-in replacement of upstream sources.
>
> ----
>
> '''Apply:''' [attachment:14706_R_3.0.1.patch]

New description:

 '''New spkg''':
 [http://boxen.math.washington.edu/home/jpflori/spkg/r-3.0.2.p0.spkg]

 === r-3.0.2.p0 (Jean-Pierre Flori, 7 October 2013) ===
  * #14706: update to 3.0.2.
  * Remove sqrtl.patch which is now upstream.

 === r-3.0.1.p1 (Jean-Pierre Flori, 10 June 2013) ===
  * #14706: Use --disable-long-double on Cygwin rather than patching.
  * Add sqrtl.patch from upstream to make --disable-long-double work.

 === r-3.0.1.p0 (Emmanuel Charpentier, 8 June 2013) ===
  * #14706: Drop-in replacement of upstream sources.

 ----

 '''Apply:''' [attachment:14706_R_3.0.1.patch]

--

Comment (by jpflori):

 I've updated a trivially updated spkg, could you give it a shot?
 And post or link the failing log?

 It doesn't seem the failing line you mentioned changed.
 (Note that the line I get is slightly different, I don't get the -lRblas.)
 Before that line at least, on my install, when libR.so is built,
 -lreadline is correctly passed, so maybe this changed for 3.0.2.

 At this point, I changed nothing to deal with a potentially conflicting
 old version of R 2.x as mentioned earlier on this ticket.

--
Ticket URL: <http://trac.sagemath.org/ticket/14706#comment:86>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica, 
and MATLAB

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