#16026: Upgrade dot2tex spkg and make it work with most recent matplotlib
-------------------------------------+-------------------------------------
Reporter: tscrim | Owner: sage-combinat
Type: defect | Status: needs_review
Priority: major | Milestone: sage-6.2
Component: combinatorics | Resolution:
Keywords: | Merged in:
Authors: Volker Braun | Reviewers:
Report Upstream: Reported | Work issues:
upstream. No feedback yet. | Commit:
Branch: u/vbraun/dot2tex | 0c5b4f8702f15b239adb5412d31c138fe62d0f8b
Dependencies: | Stopgaps:
-------------------------------------+-------------------------------------
Comment (by aschilling):
Replying to [comment:39 vbraun]:
> Anne: so whats in the pycrypto log?
Here it is. But I cannot even compile the stable version of sage any
longer. What is going on?
{{{
Found local metadata for pycrypto-2.6.1.p0
Found local sources at /Applications/sage/upstream/pycrypto-2.6.1.tar.gz
Checksum: aeda3ed41caf1766409d4efc689b9ca30ad6aeb2 vs
aeda3ed41caf1766409d4efc689b9ca30ad6aeb2
pycrypto-2.6.1.p0
====================================================
Setting up build directory for pycrypto-2.6.1.p0
Finished set up
****************************************************
Host system:
Darwin lolita-4.local 10.8.0 Darwin Kernel Version 10.8.0: Tue Jun 7
16:33:36 PDT 2011; root:xnu-1504.15.3~1/RELEASE_I386 i386
****************************************************
C compiler: gcc
C compiler version:
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/Applications/sage/local/libexec/gcc/x86_64-apple-
darwin10.8.0/4.7.3/lto-wrapper
Target: x86_64-apple-darwin10.8.0
Configured with: ../src/configure --prefix=/Applications/sage/local
--with-local-prefix=/Applications/sage/local --with-
gmp=/Applications/sage/local --with-mpfr=/Applications/sage/local --with-
mpc=/Applications/sage/local --with-system-zlib --disable-multilib
--disable-nls
Thread model: posix
gcc version 4.7.3 (GCC)
****************************************************
patching file src/libtom/tomcrypt_pk.h
running install
running build
running build_py
creating build
creating build/lib.macosx-10.6-x86_64-2.7
creating build/lib.macosx-10.6-x86_64-2.7/Crypto
copying lib/Crypto/__init__.py -> build/lib.macosx-10.6-x86_64-2.7/Crypto
copying lib/Crypto/pct_warnings.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
copying lib/Crypto/Hash/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
copying lib/Crypto/Hash/hashalgo.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
copying lib/Crypto/Hash/HMAC.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
copying lib/Crypto/Hash/MD2.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
copying lib/Crypto/Hash/MD4.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
copying lib/Crypto/Hash/MD5.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
copying lib/Crypto/Hash/RIPEMD.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
copying lib/Crypto/Hash/SHA.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
copying lib/Crypto/Hash/SHA224.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
copying lib/Crypto/Hash/SHA256.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
copying lib/Crypto/Hash/SHA384.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
copying lib/Crypto/Hash/SHA512.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Hash
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
copying lib/Crypto/Cipher/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
copying lib/Crypto/Cipher/AES.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
copying lib/Crypto/Cipher/ARC2.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
copying lib/Crypto/Cipher/ARC4.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
copying lib/Crypto/Cipher/blockalgo.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
copying lib/Crypto/Cipher/Blowfish.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
copying lib/Crypto/Cipher/CAST.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
copying lib/Crypto/Cipher/DES.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
copying lib/Crypto/Cipher/DES3.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
copying lib/Crypto/Cipher/PKCS1_OAEP.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
copying lib/Crypto/Cipher/PKCS1_v1_5.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
copying lib/Crypto/Cipher/XOR.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Cipher
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/Util
copying lib/Crypto/Util/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Util
copying lib/Crypto/Util/_number_new.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Util
copying lib/Crypto/Util/asn1.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Util
copying lib/Crypto/Util/Counter.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Util
copying lib/Crypto/Util/number.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Util
copying lib/Crypto/Util/py21compat.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Util
copying lib/Crypto/Util/py3compat.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Util
copying lib/Crypto/Util/randpool.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Util
copying lib/Crypto/Util/RFC1751.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Util
copying lib/Crypto/Util/winrandom.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Util
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/Random
copying lib/Crypto/Random/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Random
copying lib/Crypto/Random/_UserFriendlyRNG.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Random
copying lib/Crypto/Random/random.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Random
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/Random/Fortuna
copying lib/Crypto/Random/Fortuna/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Random/Fortuna
copying lib/Crypto/Random/Fortuna/FortunaAccumulator.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Random/Fortuna
copying lib/Crypto/Random/Fortuna/FortunaGenerator.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Random/Fortuna
copying lib/Crypto/Random/Fortuna/SHAd256.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Random/Fortuna
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/Random/OSRNG
copying lib/Crypto/Random/OSRNG/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Random/OSRNG
copying lib/Crypto/Random/OSRNG/fallback.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Random/OSRNG
copying lib/Crypto/Random/OSRNG/nt.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Random/OSRNG
copying lib/Crypto/Random/OSRNG/posix.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Random/OSRNG
copying lib/Crypto/Random/OSRNG/rng_base.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Random/OSRNG
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest
copying lib/Crypto/SelfTest/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest
copying lib/Crypto/SelfTest/st_common.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
copying lib/Crypto/SelfTest/Cipher/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
copying lib/Crypto/SelfTest/Cipher/common.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
copying lib/Crypto/SelfTest/Cipher/test_AES.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
copying lib/Crypto/SelfTest/Cipher/test_ARC2.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
copying lib/Crypto/SelfTest/Cipher/test_ARC4.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
copying lib/Crypto/SelfTest/Cipher/test_Blowfish.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
copying lib/Crypto/SelfTest/Cipher/test_CAST.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
copying lib/Crypto/SelfTest/Cipher/test_DES.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
copying lib/Crypto/SelfTest/Cipher/test_DES3.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
copying lib/Crypto/SelfTest/Cipher/test_pkcs1_15.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
copying lib/Crypto/SelfTest/Cipher/test_pkcs1_oaep.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
copying lib/Crypto/SelfTest/Cipher/test_XOR.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Cipher
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
copying lib/Crypto/SelfTest/Hash/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
copying lib/Crypto/SelfTest/Hash/common.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
copying lib/Crypto/SelfTest/Hash/test_HMAC.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
copying lib/Crypto/SelfTest/Hash/test_MD2.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
copying lib/Crypto/SelfTest/Hash/test_MD4.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
copying lib/Crypto/SelfTest/Hash/test_MD5.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
copying lib/Crypto/SelfTest/Hash/test_RIPEMD.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
copying lib/Crypto/SelfTest/Hash/test_SHA.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
copying lib/Crypto/SelfTest/Hash/test_SHA224.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
copying lib/Crypto/SelfTest/Hash/test_SHA256.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
copying lib/Crypto/SelfTest/Hash/test_SHA384.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
copying lib/Crypto/SelfTest/Hash/test_SHA512.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Hash
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Protocol
copying lib/Crypto/SelfTest/Protocol/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Protocol
copying lib/Crypto/SelfTest/Protocol/test_AllOrNothing.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Protocol
copying lib/Crypto/SelfTest/Protocol/test_chaffing.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Protocol
copying lib/Crypto/SelfTest/Protocol/test_KDF.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Protocol
copying lib/Crypto/SelfTest/Protocol/test_rfc1751.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Protocol
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/PublicKey
copying lib/Crypto/SelfTest/PublicKey/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/PublicKey
copying lib/Crypto/SelfTest/PublicKey/test_DSA.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/PublicKey
copying lib/Crypto/SelfTest/PublicKey/test_ElGamal.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/PublicKey
copying lib/Crypto/SelfTest/PublicKey/test_importKey.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/PublicKey
copying lib/Crypto/SelfTest/PublicKey/test_RSA.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/PublicKey
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random
copying lib/Crypto/SelfTest/Random/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random
copying lib/Crypto/SelfTest/Random/test__UserFriendlyRNG.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random
copying lib/Crypto/SelfTest/Random/test_random.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random
copying lib/Crypto/SelfTest/Random/test_rpoolcompat.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random/Fortuna
copying lib/Crypto/SelfTest/Random/Fortuna/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random/Fortuna
copying lib/Crypto/SelfTest/Random/Fortuna/test_FortunaAccumulator.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random/Fortuna
copying lib/Crypto/SelfTest/Random/Fortuna/test_FortunaGenerator.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random/Fortuna
copying lib/Crypto/SelfTest/Random/Fortuna/test_SHAd256.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random/Fortuna
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random/OSRNG
copying lib/Crypto/SelfTest/Random/OSRNG/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random/OSRNG
copying lib/Crypto/SelfTest/Random/OSRNG/test_fallback.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random/OSRNG
copying lib/Crypto/SelfTest/Random/OSRNG/test_generic.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random/OSRNG
copying lib/Crypto/SelfTest/Random/OSRNG/test_nt.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random/OSRNG
copying lib/Crypto/SelfTest/Random/OSRNG/test_posix.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random/OSRNG
copying lib/Crypto/SelfTest/Random/OSRNG/test_winrandom.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Random/OSRNG
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Util
copying lib/Crypto/SelfTest/Util/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Util
copying lib/Crypto/SelfTest/Util/test_asn1.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Util
copying lib/Crypto/SelfTest/Util/test_Counter.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Util
copying lib/Crypto/SelfTest/Util/test_number.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Util
copying lib/Crypto/SelfTest/Util/test_winrandom.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Util
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Signature
copying lib/Crypto/SelfTest/Signature/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Signature
copying lib/Crypto/SelfTest/Signature/test_pkcs1_15.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Signature
copying lib/Crypto/SelfTest/Signature/test_pkcs1_pss.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/SelfTest/Signature
creating build/lib.macosx-10.6-x86_64-2.7/Crypto/Protocol
copying lib/Crypto/Protocol/__init__.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Protocol
copying lib/Crypto/Protocol/AllOrNothing.py ->
build/lib.macosx-10.6-x86_64-2.7/Crypto/Protocol
Traceback (most recent call last):
File "setup.py", line 456, in <module>
core.setup(**kw)
File "/Applications/sage/local/lib/python/distutils/core.py", line 152,
in setup
dist.run_commands()
File "/Applications/sage/local/lib/python/distutils/dist.py", line 953,
in run_commands
self.run_command(cmd)
File "/Applications/sage/local/lib/python/distutils/dist.py", line 972,
in run_command
cmd_obj.run()
File "/Applications/sage/local/lib/python/distutils/command/install.py",
line 563, in run
self.run_command('build')
File "/Applications/sage/local/lib/python/distutils/cmd.py", line 326,
in run_command
self.distribution.run_command(command)
File "/Applications/sage/local/lib/python/distutils/dist.py", line 972,
in run_command
cmd_obj.run()
File "/Applications/sage/local/lib/python/distutils/command/build.py",
line 127, in run
self.run_command(cmd_name)
File "/Applications/sage/local/lib/python/distutils/cmd.py", line 326,
in run_command
self.distribution.run_command(command)
File "/Applications/sage/local/lib/python/distutils/dist.py", line 972,
in run_command
cmd_obj.run()
File "setup.py", line 251, in run
self.run_command(cmd_name)
File "/Applications/sage/local/lib/python/distutils/cmd.py", line 326,
in run_command
self.distribution.run_command(command)
File "/Applications/sage/local/lib/python/distutils/dist.py", line 972,
in run_command
cmd_obj.run()
File "setup.py", line 278, in run
raise RuntimeError("autoconf error")
RuntimeError: autoconf error
Error: Failed to install PyCrypto.
real 0m0.460s
user 0m0.137s
sys 0m0.148s
************************************************************************
Error installing package pycrypto-2.6.1.p0
************************************************************************
Please email sage-devel (http://groups.google.com/group/sage-devel)
explaining the problem and including the relevant part of the log file
/Applications/sage/logs/pkgs/pycrypto-2.6.1.p0.log
Describe your computer, operating system, etc.
If you want to try to fix the problem yourself, *don't* just cd to
/Applications/sage/local/var/tmp/sage/build/pycrypto-2.6.1.p0 and type
'make' or whatever is appropriate.
Instead, the following commands setup all environment variables
correctly and load a subshell for you to debug the error:
(cd '/Applications/sage/local/var/tmp/sage/build/pycrypto-2.6.1.p0' &&
'/Applications/sage/sage' --sh)
When you are done debugging, you can type "exit" to leave the subshell.
************************************************************************
}}}
--
Ticket URL: <http://trac.sagemath.org/ticket/16026#comment:43>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica,
and MATLAB
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