#18027: Move interrupts to Cython
-------------------------------------------------+-------------------------
Reporter: jdemeyer | Owner:
Type: enhancement | Status: closed
Priority: major | Milestone: sage-6.6
Component: cython | Resolution: fixed
Keywords: | Merged in:
Authors: Jeroen Demeyer | Reviewers: Jean-
Report Upstream: Reported upstream. No | Pierre Flori
feedback yet. | Work issues:
Branch: | Commit:
6d738d6e869b869ccaf68a5db6a166542647dd7d | Stopgaps:
Dependencies: |
-------------------------------------------------+-------------------------
Comment (by fbissey):
I'll surely open a follow up ticket about that `build` directory question
once I have figured out to deal with it. I am not completely sure you have
totally broken all "global" sage install and whether or not making those
install carry at least a fragment of the build folder will fix it
properly.
Who else needs to have their build folder kept?
It joins a basket of issues that I have duct-taped in sage-on-gentoo for
years to have doctest and spyx files to work properly. If I had spent more
time on fixing the installation of sage headers and various auxiliary
files rather than the duct tape we wouldn't be there today.
That's a sample
{{{
1 item had failures:
1 of 4 in sage.doctest.tests.sig_on
[2 tests, 1 failure, ...]
----------------------------------------------------------------------
sage -t --warn-long 0.0 sig_on.rst # 1 doctest failed
----------------------------------------------------------------------
...
1
Got:
Running doctests with ID 2015-05-24-22-01-48-66399ec6.
Doctesting 1 file.
sage -t --warn-long 0.0 sig_on.rst
**********************************************************************
File "sig_on.rst", line 3, in sage.doctest.tests.sig_on
Failed example:
cython('sig_on()')
Exception raised:
Traceback (most recent call last):
File "/usr/lib64/python2.7/site-
packages/sage/doctest/forker.py", line 496, in _run
self.compile_and_execute(example, compiler, test.globs)
File "/usr/lib64/python2.7/site-
packages/sage/doctest/forker.py", line 858, in compile_and_execute
exec(compiled, globs)
File "<doctest sage.doctest.tests.sig_on[0]>", line 1, in
<module>
cython('sig_on()')
File "sage/misc/cython_c.pyx", line 63, in
sage.misc.cython_c.cython (build/cythonized/sage/misc/cython_c.c:949)
sage.server.support.cython_import_all(tmpfile, globals(),
File "/usr/lib64/python2.7/site-
packages/sage/server/support.py", line 85, in cython_import_all
create_local_c_file=create_local_c_file)
File "/usr/lib64/python2.7/site-
packages/sage/server/support.py", line 62, in cython_import
**kwds)
File "/usr/lib64/python2.7/site-packages/sage/misc/cython.py",
line 519, in cython
raise RuntimeError("Error compiling
{}:\n{}\n{}".format(filename, log, err))
RuntimeError: Error compiling /home/fbissey/.sage/temp/QCD-
nzi3/10231/tmp_FdPxlK.spyx:
running build
running build_ext
building
'_home_fbissey__sage_temp_QCD_nzi3_10231_tmp_FdPxlK_spyx_0' extension
creating build
creating build/temp.linux-x86_64-2.7
x86_64-pc-linux-gnu-gcc -pthread -fPIC -I/usr/include/csage
-I/usr/include -I/usr/include/python2.7 -I/usr/lib/python/site-
packages/numpy/core/include -I/usr/share/sage/src/sage/ext
-I/usr/share/sage/src -I/usr/share/sage/src/sage/gsl
-I/home/fbissey/.sage/temp/QCD-nzi3/10231 -I/usr/include/python2.7 -c
_home_fbissey__sage_temp_QCD_nzi3_10231_tmp_FdPxlK_spyx_0.c -o build/temp
.linux-
x86_64-2.7/_home_fbissey__sage_temp_QCD_nzi3_10231_tmp_FdPxlK_spyx_0.o -w
-O2
<BLANKLINE>
In file included from
_home_fbissey__sage_temp_QCD_nzi3_10231_tmp_FdPxlK_spyx_0.c:248:0:
/usr/share/sage/src/sage/ext/interrupt/pxi.h:7:63: fatal error:
build/cythonized/sage/ext/interrupt/interrupt_api.h: No such file or
directory
#include "build/cythonized/sage/ext/interrupt/interrupt_api.h"
^
compilation terminated.
error: command 'x86_64-pc-linux-gnu-gcc' failed with exit status 1
<BLANKLINE>
**********************************************************************
1 item had failures:
1 of 4 in sage.doctest.tests.sig_on
[2 tests, 1 failure, 0.86 s]
----------------------------------------------------------------------
sage -t --warn-long 0.0 sig_on.rst # 1 doctest failed
----------------------------------------------------------------------
Total time for all tests: 0.9 seconds
cpu time: 0.0 seconds
cumulative wall time: 0.9 seconds
1
**********************************************************************
1 item had failures:
1 of 45 in sage.doctest.test
[44 tests, 1 failure, 98.40 s]
----------------------------------------------------------------------
sage -t --long /usr/share/sage/src/sage/doctest/test.py # 1 doctest
failed
}}}
--
Ticket URL: <http://trac.sagemath.org/ticket/18027#comment:40>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica,
and MATLAB
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