#18395: (moderate) Speedup in layout_spring
-------------------------+-------------------------------------------------
       Reporter:         |        Owner:
  ncohen                 |       Status:  needs_work
           Type:         |    Milestone:  sage-6.8
  enhancement            |   Resolution:
       Priority:  major  |    Merged in:
      Component:  graph  |    Reviewers:
  theory                 |  Work issues:
       Keywords:         |       Commit:
        Authors:         |  0e09b28c7042adf81611beebc709613a04a1083b
  Nathann Cohen          |     Stopgaps:
Report Upstream:  N/A    |
         Branch:         |
  public/18395           |
   Dependencies:         |
-------------------------+-------------------------------------------------
Changes (by dcoudert):

 * status:  needs_review => needs_work
 * milestone:  sage-6.7 => sage-6.8


Comment:

 I tried on top of 6.8.rc0
 {{{
 sage -t --long src/sage/graphs/generic_graph_pyx.pyx
 **********************************************************************
 File "src/sage/graphs/generic_graph_pyx.pyx", line 54, in
 sage.graphs.generic_graph_pyx.spring_layout_fast_split
 Failed example:
     spring_layout_fast_split(G)
 Expected:
     {0: [0.452..., 0.247...], ..., 502: [25.7..., 0.505...]}
 Got:
     {0: [nan, nan],
      1: [nan, nan],
      2: [nan, nan],
 ...
      902: [nan, nan]}
 **********************************************************************
 File "src/sage/graphs/generic_graph_pyx.pyx", line 97, in
 sage.graphs.generic_graph_pyx.spring_layout_fast
 Failed example:
     spring_layout_fast(G)
 Expected:
     {0: [-0.0733..., 0.157...], ..., 502: [-0.551..., 0.682...]}
 Got:
     {0: [nan, nan],
      1: [nan, nan],
 ...
      902: [nan, nan]}
 **********************************************************************
 File "src/sage/graphs/generic_graph_pyx.pyx", line 113, in
 sage.graphs.generic_graph_pyx.spring_layout_fast
 Failed example:
     spring_layout_fast(G, by_component = True)
 Expected:
     {0: [2.12..., -0.321...], ..., 502: [26.0..., -0.812...]}
 Got:
     {0: [nan, nan],
      1: [nan, nan],
 ...
      902: [nan, nan]}
 **********************************************************************
 File "src/sage/graphs/generic_graph_pyx.pyx", line 346, in
 sage.graphs.generic_graph_pyx.sqrt_approx
 Failed example:
     polar_plot([1,lambda x:dist(cos(x),sin(x))], (0, 2*pi))
 Expected:
     Launched png viewer for Graphics object consisting of 2 graphics
 primitives
 Got:
     Graphics object consisting of 2 graphics primitives
 **********************************************************************
 3 items had failures:
    2 of   9 in sage.graphs.generic_graph_pyx.spring_layout_fast
    1 of   5 in sage.graphs.generic_graph_pyx.spring_layout_fast_split
    1 of   3 in sage.graphs.generic_graph_pyx.sqrt_approx
     [81 tests, 4 failures, 3.03 s]
 ----------------------------------------------------------------------
 sage -t --long src/sage/graphs/generic_graph_pyx.pyx  # 4 doctests failed
 ----------------------------------------------------------------------
 Total time for all tests: 3.1 seconds
     cpu time: 2.8 seconds
     cumulative wall time: 3.0 seconds
 }}}

--
Ticket URL: <http://trac.sagemath.org/ticket/18395#comment:8>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica, 
and MATLAB

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