#8306: Parallel inter/intra-spkg builds
-------------------------------------------+--------------------------------
Reporter: mpatel | Owner: GeorgSWeber
Type: enhancement | Status: needs_review
Priority: major | Milestone: sage-4.4.4
Component: build | Keywords:
Author: Mitesh Patel, John Palmieri | Upstream: N/A
Reviewer: David Kirkby, John Palmieri | Merged:
Work_issues: |
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Comment(by mpatel):
From R's `make check` on t2:
{{{
Collecting examples for package ‘stats’
Extracting from parsed Rd's ..............................
Running examples in package ‘stats’
Error: testing 'stats' failed
Execution halted
make[5]: *** [test-Examples-Base] Error 1
}}}
Some detail from `src/tests/Examples/stats-Ex.Rout.fail`:
{{{
> contrasts(ffs) <- contr.sum(5, sparse=TRUE)[,1:2]; contrasts(ffs)
Error in .Diag(levels, sparse = sparse) :
contr*(.., sparse=TRUE) needs package "Matrix" correctly installed
Calls: contr.sum -> .Diag
Execution halted
}}}
According to
[http://sage.math.washington.edu/home/mpatel/trac/8306/r-2.10.1.p2.log
this log], R's Matrix package isn't built/installed successfully on t2:
{{{
Loading required package: Matrix
Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared library '/scratch/mpatel/sage-4.4.4.alpha0-j64
-par-chk/spkg/build/r-2.10.1.p2/src/library/Matrix/libs/Matrix.so':
ld.so.1: R: fatal: libgcc_s.so.1: open failed: No such file or directory
Error : require(Matrix, save = FALSE) is not TRUE
}}}
An alternative is to compare the output of `ls SAGE_LOCAL/lib/R/library`
on non-#8306 sage.math and t2 builds. I think we're also missing class,
mgcv, nnet, rpart, spatial, and survival on t2.
But I think this is independent of this ticket --- see, e.g.,
`/rootpool2/local/kirkby/sage-4.4.3/install.log` on t2.
--
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/8306#comment:67>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica,
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