#9238: J. Gutow's update to Jmol in the notebook...
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   Reporter:  gutow        |       Owner:  jason, was
       Type:  enhancement  |      Status:  new       
   Priority:  major        |   Milestone:  sage-4.4.4
  Component:  notebook     |    Keywords:            
     Author:               |    Upstream:  N/A       
   Reviewer:               |      Merged:            
Work_issues:               |  
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Comment(by gutow):

 Replying to [comment:25 kcrisman]:
 I was correct it is a path issue caused by whomever set things up so that
 sagenb is inside an .egg with sage rather than simply its own directory
 structure.  It works fine if the following replacement is made in the
 shell file jmol:

 JMOL_HOME="`"$SAGE_LOCAL"/bin/sage-pypkg-location
 sagenb`""sagenb/data/jmol"

 is replaced by

 JMOL_HOME="`"$SAGE_LOCAL"/bin/sage-pypkg-location
 sagenb`""sagenb-0.8-py2.6.egg/sagenb/data/jmol"

 to account for the extra directory level that has been added.  Who do I
 ask about this?  I can fix the shell, but I want to make sure that the
 directory structure is supposed to have the .egg in it.

 > Yup, both there (well, Jmol is jmol, but would that make the
 difference?).
 > > If the files are there then there is something we don't understand or
 the path in the Jmol shell script is wrong.

-- 
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/9238#comment:26>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica, 
and MATLAB

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