#9896: Upgrading from 4.5.3 to 4.6.alpha* can fail (not limited to MacOS X)
----------------------------------------------------------------------------------+
Reporter: jhpalmieri
| Owner: GeorgSWeber
Type: defect
| Status: needs_work
Priority: blocker
| Milestone: sage-4.6
Component: build
| Keywords: upgrade update dependencies PARI NewPARI
Author: Leif Leonhardy
| Upstream: N/A
Reviewer:
| Merged:
Work_issues: Provide a patch (to setup.py) which fixes the Darwin linker
issue. |
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Changes (by leif):
* work_issues: Perhaps rebase module_list patch on alpha3; remove
sage_scripts from R's deps => Provide a
patch (to setup.py) which fixes the
Darwin linker issue.
Comment:
Since #10016 has been merged into Sage 4.6.alpha2, I've attached a new
version (v3) of {{{spkg/standard/deps}}}, which just removes the
dependency of R on {{{sage_scripts}}}.
Here's a diff between v2b and v3:
{{{
#!diff
--- trac_9896-SAGE_ROOT__spkg__standard__deps.v2b 2010-09-27
18:50:32.000000000 +0200
+++ trac_9896-SAGE_ROOT__spkg__standard__deps.v3 2010-10-18
14:57:44.000000000 +0200
@@ -21,9 +21,7 @@
# Rather than making *all* standard packages depend on SAGE_SCRIPTS
(which
# triggers the rebuild of *every* package on an upgrade), add
SAGE_SCRIPTS
# to the dependencies of only those packages that rely on them.
-# These are:
-# - R until #10016 is merged (replacing "sage -f ..." by a call to sage-
spkg),
-# or until #9906 is merged (which moves the RPy spkg out of R's)
+# These are (as of Sage 4.6.alpha3):
# - The Sage library, $(SAGE)
# - sagetex, but this in turn depends on $(SAGE)
@@ -368,15 +366,10 @@
$(INST)/$(MAXIMA): $(BASE) $(INST)/$(ECL)
$(INSTALL) "$(SAGE_SPKG) $(MAXIMA) 2>&1" "tee -a
$(SAGE_LOGS)/$(MAXIMA).log"
-# Until #10016 (or #9906) gets merged, R depends on SAGE_SCRIPTS, because
it
-# installs the contained RPy spkg with "sage -f", which also requires
sage-sage:
-$(INST)/$(R): $(BASE) $(INST)/$(SAGE_SCRIPTS) \
- $(INST)/$(PYTHON) $(INST)/$(ATLAS) $(INST)/$(ICONV)
$(INST)/$(FORTRAN)
+# Note that even with a separate RPy spkg (#9906), Sage's R will still
depend on
+# Python (but does no longer on SAGE_SCRIPTS, #10016):
+$(INST)/$(R): $(BASE) $(INST)/$(PYTHON) $(INST)/$(ATLAS) $(INST)/$(ICONV)
$(INST)/$(FORTRAN)
$(INSTALL) "$(SAGE_SPKG) $(R) 2>&1" "tee -a $(SAGE_LOGS)/$(R).log"
-# Note that even with a separate RPy spkg (#9906), Sage's R still depends
on
-# Python (but no longer on SAGE_SCRIPTS, see above):
-# $(INST)/$(R): $(BASE) $(INST)/$(PYTHON) $(INST)/$(ATLAS)
$(INST)/$(ICONV) $(INST)/$(FORTRAN)
-# $(INSTALL) "$(SAGE_SPKG) $(R) 2>&1" "tee -a $(SAGE_LOGS)/$(R).log"
# Needed when #9906 gets merged (moving RPy out of R's spkg):
# $(INST)/$(RPY): $(BASE) $(INST)/$(PYTHON) $(INST)/$(R)
}}}
(Note that neither {{{spkg/install}}} nor {{{spkg/standard/deps}}} have
changed between Sage 4.6.alpha1 and 4.6.alpha3, so there's no new v3 of
the former, and the diffs apply to alpha1...alpha3. Also, although
{{{devel/sage/module_list.py}}} has changed, the current patch here still
applies to Sage 4.6.alpha3 without rejects.)
--
Ticket URL: <http://trac.sagemath.org/sage_trac/ticket/9896#comment:117>
Sage <http://www.sagemath.org>
Sage: Creating a Viable Open Source Alternative to Magma, Maple, Mathematica,
and MATLAB
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