Let’s say I generate an mplileup file feeding .BAM files to samtools as *.BAM. Should I assume the samples are ordered in the mpileup alphabetically, by .BAM filename?
What if I list BAMs as "zzz.BAM, aaa.BAM"? Still alphabetically or in the order listed in the command line? Thanks! -- Lev Yampolsky Professor Department of Biological Sciences East Tennessee State University Box 70703 Johnson City TN 37614-1710 Cell 423-676-7489 Office/lab 423-439-4359 Fax 423-439-5958 ------------------------------------------------------------------------------ Slashdot TV. Video for Nerds. Stuff that matters. http://tv.slashdot.org/ _______________________________________________ Samtools-help mailing list Samtools-help@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/samtools-help
