Hey Julian,

this is on our list of things to do, and will be coming there in an
upcoming release, though I cannot give you an exact date.  We always
welcome contributions, so feel free to make a pull request if you are able.

Nils

On Wed, Oct 22, 2014 at 12:12 AM, Julian Hess <jh...@broadinstitute.org>
wrote:

> Hi,
>
> It seems that the SamLocusIterator class operates only on instances of
> the SAMFileReader class, which is now deprecated in favor of the SamReader
> class.  Would it be possible to update SamLocusIterator to also work with
> SamReader objects?
>
> Thanks so much,
> --Julian
>
>
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