I would try downloading the file and indexing your local copy.
Unless I'm mistaken, nothing in the bcftools documentation
indicates that it should work over an http: connection.
- tom blackwell -
On Mon, 22 Aug 2016, Yuelin Zhu wrote:
> Dear all,
>
> I got Segmentation fault whenever doing bcftools index on the following
> file:
>
> http://gbnci-abcc.ncifcrf.gov/fileman/temp/1348518/geno.TRA.bcf
>
> $ which bcftools
>
> /usr/local/apps/samtools/1.3.1/bin/bcftools
>
> $ bcftools index geno.TRA.bcf
>
> Segmentation fault
>
> Your insight will be greatly appreciated.
>
> Jack
> ----
> Yuelin Jack Zhu
>
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