I'm trying the following

samtools tview SRR1976948.sam.bam.sorted.bam subset_assembly.fa -p k99_13588

and get the this error

[E::hts_hopen] fail to open file 'SRR1976948.sam.bam.sorted.bam'
[E::hts_open_format] fail to open file 'SRR1976948.sam.bam.sorted.bam'
sam_open SRR1976948.sam.bam.sorted.bam. subset_assembly.fa



Any suggestions?


Best,
Shannon
-- 
______________________
Shannon E.K. Joslin
PhD Student | Korf Lab
Integrative Genomics & Genetics Graduate Group
University of California, Davis | GBSF
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