Hi, I've been working more with crams lately and in some cases, it seems the default behavior of htslib is to automatically start downloading reference files locally even though I have not set REF_CACHE or REF_PATH. This is deep in a complex pipeline behind several layers of abstraction, but I think this is the default.
Is there a way to have htslib error if the fasta is not specified instead of defaulting to download? thanks, -Brent ------------------------------------------------------------------------------ Check out the vibrant tech community on one of the world's most engaging tech sites, Slashdot.org! http://sdm.link/slashdot _______________________________________________ Samtools-help mailing list Samtools-help@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/samtools-help
