Bug#1054813: marked as pending in python-dmidecode

2024-01-19 Thread Sandro Tosi
Control: tag -1 pending

Hello,

Bug #1054813 in python-dmidecode reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/python-team/packages/python-dmidecode/-/commit/5dd99281ee181371c0ed5bce4862a2873e625291


support Python 2-digits minor version, fixing a FTBFS; Closes: #1054813


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/1054813



Processed: Bug#1054813 marked as pending in python-dmidecode

2024-01-19 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 pending
Bug #1054813 [src:python-dmidecode] python-dmidecode: FTBFS: make[2]: *** 
[Makefile:4: test] Error 1
Ignoring request to alter tags of bug #1054813 to the same tags previously set

-- 
1054813: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1054813
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#1056802: marked as done (gensim: ftbfs with cython 3.0.x)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Sat, 20 Jan 2024 07:49:04 +
with message-id 
and subject line Bug#1056802: fixed in gensim 4.3.2+dfsg-1
has caused the Debian Bug report #1056802,
regarding gensim: ftbfs with cython 3.0.x
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1056802: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1056802
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:gensim
Version: 4.2.0+dfsg-1
Severity: important
Tags: sid trixie
User: debian-pyt...@lists.debian.org
Usertags: cython3

[This bug is targeted to the upcoming trixie release]

The package fails to build in a test rebuild on at least arm64 with
cython 3.0.5, but succeeds to build with cython 0.29.36.  Please
update the package to build with cython 3.0.5 (available in experimental).

If the package cannot be built with cython 3.0.5, please change the
build dependency from cython3 to cython3-legacy (available now in
unstable).  There is no replacement for cython3-dbg.

Build logs building with cython 3.0.5 can be found at
https://people.debian.org/~stefanor/cython3/cython-3.0.5/

See also https://lists.debian.org/debian-python/2023/11/msg00034.html
--- End Message ---
--- Begin Message ---
Source: gensim
Source-Version: 4.3.2+dfsg-1
Done: Andreas Tille 

We believe that the bug you reported is fixed in the latest version of
gensim, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1056...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille  (supplier of updated gensim package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Format: 1.8
Date: Sat, 20 Jan 2024 08:08:01 +0100
Source: gensim
Architecture: source
Version: 4.3.2+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Andreas Tille 
Closes: 1056802
Changes:
 gensim (4.3.2+dfsg-1) unstable; urgency=medium
 .
   * Team upload.
 .
   [ Debian Janitor ]
   * Remove constraints unnecessary since buster (oldstable):
 + Build-Depends: Drop versioned constraint on python3-scipy.
 .
   [ Andreas Tille ]
   * New upstream version
 Closes: #1056802
   * Add debian/gbp.conf due to non-default branch layout per
 Debian Science team policy
   * Standards-Version: 4.6.2 (routine-update)
   * Remove trailing whitespace in debian/changelog (routine-update)
   * Add salsa-ci file (routine-update)
   * Set upstream metadata fields: Security-Contact.
   * Build-Depends: s/dh-python/dh-sequence-python3/ (routine-update)
   * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository,
 Repository-Browse.
   * Generate numpy ABI
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gensim_4.3.2+dfsg-1_amd64.buildinfo
Checksums-Sha256:
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gensim_4.3.2+dfsg-1.debian.tar.xz
 bb7259818ac31538d42162eece2dbc18fc4a8489de6357c14dd9cdc8716f4bc7 10398 
gensim_4.3.2+dfsg-1_amd64.buildinfo
Files:
 d528afa31bb2b0af7f1104a88a40b7d4 2349 python optional gensim_4.3.2+dfsg-1.dsc
 f92d313946a2b1a2dd7b1f1b13edddef 454652 python optional 
gensim_4.3.2+dfsg.orig.tar.xz
 b082133610ebecb3552f3bbf881067e5 6176 python optional 
gensim_4.3.2+dfsg-1.debian.tar.xz
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gensim_4.3.2+dfsg-1_amd64.buildinfo

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Processed: found 1061162 in 2.12.1-3

2024-01-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> found 1061162 2.12.1-3
Bug #1061162 [src:pypdf2] pypdf2: Do not release with Trixie
Marked as found in versions pypdf2/2.12.1-3.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
1061162: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061162
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#1057430: marked as done (ring: FTBFS: configure: error: sdbus-c++ not found)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 20:30:06 -0500
with message-id <87a5p0pza9@gnu.org>
and subject line Re: Bug#1057430: ring: FTBFS: configure: error: sdbus-c++ not 
found
has caused the Debian Bug report #1057430,
regarding ring: FTBFS: configure: error: sdbus-c++ not found
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1057430: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1057430
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: ring
Version: 20230922.0~ds2-1
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)
X-Debbugs-Cc: sramac...@debian.org

https://buildd.debian.org/status/fetch.php?pkg=ring&arch=amd64&ver=20230922.0%7Eds2-1%2Bb1&stamp=1701601320&raw=0

checking for zlib... yes
checking for libgit2 >= 1.1.0... yes
checking for libpjproject... yes
checking for yaml-cpp >= 0.5.1... yes
checking for yaml-cpp >= 0.5.1... yes
checking for jsoncpp >= 1.6.5... yes
checking for alsa >= 1.0... yes
checking for libpulse >= 0.9.15... yes
checking for jack... no
checking for sdbus-c++... no
configure: error: sdbus-c++ not found
make[1]: *** [debian/rules:31: override_dh_auto_configure] Error 1
make[1]: Leaving directory '/<>'

Cheers
-- 
Sebastian Ramacher
--- End Message ---
--- Begin Message ---
Hello,

Sebastian Ramacher writes:

> Source: ring
> Version: 20230922.0~ds2-1
> Severity: serious
> Tags: ftbfs
> Justification: fails to build from source (but built successfully in the past)
> X-Debbugs-Cc: sramac...@debian.org
>
> https://buildd.debian.org/status/fetch.php?pkg=ring&arch=amd64&ver=20230922.0%7Eds2-1%2Bb1&stamp=1701601320&raw=0
>
> checking for zlib... yes
> checking for libgit2 >= 1.1.0... yes
> checking for libpjproject... yes
> checking for yaml-cpp >= 0.5.1... yes
> checking for yaml-cpp >= 0.5.1... yes
> checking for jsoncpp >= 1.6.5... yes
> checking for alsa >= 1.0... yes
> checking for libpulse >= 0.9.15... yes
> checking for jack... no
> checking for sdbus-c++... no
> configure: error: sdbus-c++ not found
> make[1]: *** [debian/rules:31: override_dh_auto_configure] Error 1
> make[1]: Leaving directory '/<>'
>
> Cheers

john faulk writes:

> I can't seem to figure why, it compiles fine on my machine. the error
> you're showing is due to libsdbus-c++-dev being missing from your
> system. If this is not in the build-deps, a simple fix would be to add
> this package to them.
>
>

libsdbus-c++-dev was already listed in our Build-Depends, guaranteeing
it being pulled in and available at build time.

This actually turned out to be an issue in the pkgconfig file shipped
in sdbus-cpp 1.4.0 that broke any packages that depend it, including
jami - see #1059422.

I'll soon be doing a new upload of jami, so I'm closing this bug now.

Thanks,
-a--- End Message ---


Processed: 1057430 blocked by 1059422

2024-01-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> block 1057430 by 1059422
Bug #1057430 [src:ring] ring: FTBFS: configure: error: sdbus-c++ not found
1057430 was not blocked by any bugs.
1057430 was not blocking any bugs.
Added blocking bug(s) of 1057430: 1059422
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
1057430: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1057430
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#1056787: marked as done (astra-toolbox: ftbfs with cython 3.0.x)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 22:49:08 +
with message-id 
and subject line Bug#1056787: fixed in astra-toolbox 2.1.0-4
has caused the Debian Bug report #1056787,
regarding astra-toolbox: ftbfs with cython 3.0.x
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1056787: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1056787
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: src:astra-toolbox
Version: 2.1.0-3
Severity: important
Tags: sid trixie
User: debian-pyt...@lists.debian.org
Usertags: cython3

[This bug is targeted to the upcoming trixie release]

The package fails to build in a test rebuild on at least arm64 with
cython 3.0.5, but succeeds to build with cython 0.29.36.  Please
update the package to build with cython 3.0.5 (available in experimental).

If the package cannot be built with cython 3.0.5, please change the
build dependency from cython3 to cython3-legacy (available now in
unstable).  There is no replacement for cython3-dbg.

Build logs building with cython 3.0.5 can be found at
https://people.debian.org/~stefanor/cython3/cython-3.0.5/

See also https://lists.debian.org/debian-python/2023/11/msg00034.html
--- End Message ---
--- Begin Message ---
Source: astra-toolbox
Source-Version: 2.1.0-4
Done: Andreas Tille 

We believe that the bug you reported is fixed in the latest version of
astra-toolbox, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1056...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille  (supplier of updated astra-toolbox package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Hash: SHA512

Format: 1.8
Date: Fri, 19 Jan 2024 23:01:19 +0100
Source: astra-toolbox
Architecture: source
Version: 2.1.0-4
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Andreas Tille 
Closes: 1023675 1056787
Changes:
 astra-toolbox (2.1.0-4) unstable; urgency=medium
 .
   * Team upload
 .
   [ Bas Couwenberg ]
   * Switch to cython3-legacy.
 Closes: #1056787
   * Change liboctave-dev to octave-dev.
 .
   [ Andreas Tille ]
   * Remove NVCCFLAGS="-ccbin clang-9" variable
 Closes: #1023675
   * Standards-Version: 4.6.2 (routine-update)
   * Rules-Requires-Root: no (routine-update)
   * Fix install target
Checksums-Sha1:
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astra-toolbox_2.1.0-4.debian.tar.xz
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Checksums-Sha256:
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 abe30c8049d2ede9010ce22d430a92815d8af3757d585eef84bf9a141476f7e1 24433 
astra-toolbox_2.1.0-4_source.buildinfo
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astra-toolbox_2.1.0-4.dsc
 5c3fc832dbe993d547193c227ae9167f 6292 contrib/python optional 
astra-toolbox_2.1.0-4.debian.tar.xz
 2aede27689bce0e2d7367c608d554df0 24433 contrib/python optional 
astra-toolbox_2.1.0-4_source.buildinfo

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Bug#1061162: pypdf2: Do not release with Trixie

2024-01-19 Thread Scott Kitterman
Source: pypdf2
Version: 2.12.1-4
Severity: serious
Tags: upstream
Justification: Maintainer opinion

PyPDF2 has been replaced by pypdf upstream.  We should not release this
package with Trixie.  Rdepends should be either ported or removed.

Scott K



Bug#1056841: pymatgen: ftbfs with cython 3.0.x

2024-01-19 Thread Andreas Tille
Am Fri, Jan 19, 2024 at 08:22:21PM +0100 schrieb Drew Parsons:
> On 2024-01-19 18:52, Drew Parsons wrote:
> > 
> > Hi Andreas, could you push your upstream and pristine-tar branches?
> > Otherwise we can't use your 2023.12.18 branch.
> 
> I see what you mean.  The tag is there, the orig tarball can be regenerated
> with
> gbp export-orig.

Good to know that you can work what is on Salsa - I have removed my local clone.

Good luck
   Andreas. 

-- 
http://fam-tille.de



Bug#1060935: marked as done (python-crontab: FTBFS: dh_auto_test: error: pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit code 13)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 21:42:14 +
with message-id 
and subject line Bug#1060935: fixed in python-crontab 3.0.0-3
has caused the Debian Bug report #1060935,
regarding python-crontab: FTBFS: dh_auto_test: error: pybuild --test 
--test-pytest -i python{version} -p "3.12 3.11" returned exit code 13
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1060935: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060935
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: python-crontab
Version: 3.0.0-2
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20240115 ftbfs-trixie

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
>  debian/rules binary
> dh binary --with python3 --buildsystem=pybuild
>dh_update_autotools_config -O--buildsystem=pybuild
>dh_autoreconf -O--buildsystem=pybuild
>dh_auto_configure -O--buildsystem=pybuild
>dh_auto_build -O--buildsystem=pybuild
> I: pybuild plugin_pyproject:129: Building wheel for python3.12 with "build" 
> module
> I: pybuild base:305: python3.12 -m build --skip-dependency-check 
> --no-isolation --wheel --outdir 
> /<>/.pybuild/cpython3_3.12_crontab  
> * Building wheel...
> /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:265: 
> UserWarning: Unknown distribution option: 'release'
>   warnings.warn(msg)
> running bdist_wheel
> running build
> running build_py
> creating build
> creating build/lib
> copying crontab.py -> build/lib
> copying crontabs.py -> build/lib
> copying cronlog.py -> build/lib
> installing to build/bdist.linux-x86_64/wheel
> running install
> running install_lib
> creating build/bdist.linux-x86_64
> creating build/bdist.linux-x86_64/wheel
> copying build/lib/crontab.py -> build/bdist.linux-x86_64/wheel
> copying build/lib/cronlog.py -> build/bdist.linux-x86_64/wheel
> copying build/lib/crontabs.py -> build/bdist.linux-x86_64/wheel
> running install_egg_info
> running egg_info
> creating python_crontab.egg-info
> writing python_crontab.egg-info/PKG-INFO
> writing dependency_links to python_crontab.egg-info/dependency_links.txt
> writing requirements to python_crontab.egg-info/requires.txt
> writing top-level names to python_crontab.egg-info/top_level.txt
> writing manifest file 'python_crontab.egg-info/SOURCES.txt'
> reading manifest file 'python_crontab.egg-info/SOURCES.txt'
> reading manifest template 'MANIFEST.in'
> adding license file 'COPYING'
> adding license file 'AUTHORS'
> writing manifest file 'python_crontab.egg-info/SOURCES.txt'
> Copying python_crontab.egg-info to 
> build/bdist.linux-x86_64/wheel/python_crontab-3.0.0.egg-info
> running install_scripts
> creating build/bdist.linux-x86_64/wheel/python_crontab-3.0.0.dist-info/WHEEL
> creating 
> '/<>/.pybuild/cpython3_3.12_crontab/.tmp-3f8e1aax/python_crontab-3.0.0-py3-none-any.whl'
>  and adding 'build/bdist.linux-x86_64/wheel' to it
> adding 'cronlog.py'
> adding 'crontab.py'
> adding 'crontabs.py'
> adding 'python_crontab-3.0.0.dist-info/AUTHORS'
> adding 'python_crontab-3.0.0.dist-info/COPYING'
> adding 'python_crontab-3.0.0.dist-info/METADATA'
> adding 'python_crontab-3.0.0.dist-info/WHEEL'
> adding 'python_crontab-3.0.0.dist-info/top_level.txt'
> adding 'python_crontab-3.0.0.dist-info/RECORD'
> removing build/bdist.linux-x86_64/wheel
> Successfully built python_crontab-3.0.0-py3-none-any.whl
> I: pybuild plugin_pyproject:144: Unpacking wheel built for python3.12 with 
> "installer" module
> I: pybuild plugin_pyproject:129: Building wheel for python3.11 with "build" 
> module
> I: pybuild base:305: python3.11 -m build --skip-dependency-check 
> --no-isolation --wheel --outdir 
> /<>/.pybuild/cpython3_3.11_crontab  
> * Building wheel...
> /usr/lib/python3/dist-packages/setuptools/_distutils/dist.py:265: 
> UserWarning: Unknown distribution option: 'release'
>   warnings.warn(msg)
> running bdist_wheel
> running build
> running build_py
> installing to build/bdist.linux-x86_64/wheel
> running install
> running install_lib
> creating build/bdist.linux-x86_64/wheel
> copying build/lib/crontab.py -> build/bdist.linux-x86_64/wheel
> copying build/lib/cronlog.py -> build/bdist.linux-x86_64/wheel
> copying build/lib/crontabs.py -> build/bdist.linux-x86_64/wheel
> running install_egg_info
> running egg_info
> writing python_crontab.egg-info/PKG-INFO
> writing dependency_links to python_crontab.egg-info/dependency_links.txt
> writing requirements to python_crontab.egg-info/requires.txt
> writing top-level names to python_c

Bug#1055686: marked as done (dm-tree ftbfs with Python 3.12)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 21:34:22 +
with message-id 
and subject line Bug#1055686: fixed in dm-tree 0.1.8-3
has caused the Debian Bug report #1055686,
regarding dm-tree ftbfs with Python 3.12
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1055686: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1055686
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---

Package: src:dm-tree
Version:
Severity: important
Tags: sid trixie
User: debian-pyt...@lists.debian.org
Usertags: python3.12

dm-tree ftbfs with Python 3.12, although the build and test of the 
extension succeed with 3.12. The build then fails building the docs:


   debian/rules execute_before_dh_sphinxdoc
make[1]: Entering directory '/<>'
cd $(pybuild --print build_dir --name dm-tree |head -n1 |awk -F ': ' 
'{print $2}'); python3 -m sphinx -b html -N /<>/docs 
/<>/debian/python-dm-tree-doc/usr/share/doc/python-dm-tree-doc/html

Running Sphinx v7.2.6

Configuration error:
There is a programmable error in your configuration file:

Traceback (most recent call last):
  File "/usr/lib/python3/dist-packages/sphinx/config.py", line 358, in 
eval_config_file

exec(code, namespace)  # NoQA: S102
^
  File "/<>/docs/conf.py", line 34, in 
import tree
  File 
"/<>/.pybuild/cpython3_3.12_dm-tree/build/tree/__init__.py", 
line 23, in 

from .sequence import _is_attrs
  File 
"/<>/.pybuild/cpython3_3.12_dm-tree/build/tree/sequence.py", 
line 19, in 

from tree import _tree
ImportError: cannot import name '_tree' from partially initialized 
module 'tree' (most likely due to a circular import) 
(/<>/.pybuild/cpython3_3.12_dm-tree/build/tree/__init__.py)


make[1]: *** [debian/rules:11: execute_before_dh_sphinxdoc] Error 2
make[1]: Leaving directory '/<>'
make: *** [debian/rules:7: binary] Error 2
dpkg-buildpackage: error: debian/rules binary subprocess returned exit 
status 2


complete build log at
https://launchpadlibrarian.net/696984001/buildlog_ubuntu-noble-amd64.dm-tree_0.1.8-2_BUILDING.txt.gz
--- End Message ---
--- Begin Message ---
Source: dm-tree
Source-Version: 0.1.8-3
Done: Michael Fladischer 

We believe that the bug you reported is fixed in the latest version of
dm-tree, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1055...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael Fladischer  (supplier of updated dm-tree package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Fri, 19 Jan 2024 20:58:35 +
Source: dm-tree
Architecture: source
Version: 0.1.8-3
Distribution: unstable
Urgency: low
Maintainer: Debian Python Team 
Changed-By: Michael Fladischer 
Closes: 1055686
Changes:
 dm-tree (0.1.8-3) unstable; urgency=low
 .
   * Add patch to resolve circular imports of tree._tree (Closes: #1055686).
Checksums-Sha1:
 7d300cd58e02ffe0f3d08aef44b31ff5d35459b7 1975 dm-tree_0.1.8-3.dsc
 a3fafcdb30276d8b91d329bb871a9f062a31aec1 5404 dm-tree_0.1.8-3.debian.tar.xz
 23140c98ff2f5ab9ffb1ea576213ede9755216c4 9324 dm-tree_0.1.8-3_arm64.buildinfo
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 942b483cd65a42a5a8dc9b6e234b4a74a65285d535b62c6e4e62fca9cd385fbc 5404 
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 de40059011c4240a2893b23d474141bccc7998a30400b0911ad52d698e1f2cce 9324 
dm-tree_0.1.8-3_arm64.buildinfo
Files:
 43e6ceec330e1714f2120c1d440b0543 1975 python optional dm-tree_0.1.8-3.dsc
 89c7827ecfb81c311c5130e57040a1df 5404 python optional 
dm-tree_0.1.8-3.debian.tar.xz
 4b9725d9c3170f8a1454a37809d314e3 9324 python optional 
dm-tree_0.1.8-3_arm64.buildinfo

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Bug#1060935: marked as pending in python-crontab

2024-01-19 Thread Michael Fladischer
Control: tag -1 pending

Hello,

Bug #1060935 in python-crontab reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/python-team/packages/python-crontab/-/commit/a4a360c0740c4f2b6012b57fe6923216fc66eaea


Add patches to fix upstream tests (Closes: #1060935).


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/1060935



Processed: Bug#1060935 marked as pending in python-crontab

2024-01-19 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 pending
Bug #1060935 [src:python-crontab] python-crontab: FTBFS: dh_auto_test: error: 
pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit 
code 13
Added tag(s) pending.

-- 
1060935: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060935
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#1061159: sdaps: FTBFS: command 'sdaps_clean_i18n' has no such option 'all'

2024-01-19 Thread Aurelien Jarno
Source: sdaps
Version: 1.9.8-0.1
Severity: serious
Tags: ftbfs
Justification: fails to build from source (but built successfully in the past)

Dear maintainer,

sdaps fails to build from source. From my build log on amd64:

| dpkg-buildpackage: info: source package sdaps
| dpkg-buildpackage: info: source version 1.9.8-0.1
| dpkg-buildpackage: info: source distribution unstable
|  dpkg-source --before-build .
| dpkg-buildpackage: info: host architecture amd64
|  fakeroot debian/rules clean
| dh clean --with python3 --buildsystem=pybuild
|dh_auto_clean -O--buildsystem=pybuild
| I: pybuild base:305: python3.11 setup.py clean 
| error: error in 
/<>/.pybuild/cpython3_3.11_sdaps/.pydistutils.cfg: command 
'sdaps_clean_i18n' has no such option 'all'
| E: pybuild pybuild:391: clean: plugin distutils failed with: exit code=1: 
python3.11 setup.py clean 
| dh_auto_clean: error: pybuild --clean -i python{version} -p 3.11 returned 
exit code 13
| make: *** [debian/rules:7: clean] Error 25
| dpkg-buildpackage: error: fakeroot debian/rules clean subprocess returned 
exit status 2

The full build log for riscv64 is also available here:
https://buildd.debian.org/status/fetch.php?pkg=sdaps&arch=riscv64&ver=1.9.8-0.1%2Bb1&stamp=1705322530&raw=0

The reproducible builds also show the same issue:
https://tests.reproducible-builds.org/debian/rbuild/unstable/amd64/sdaps_1.9.8-0.1.rbuild.log.gz

Regards
Aurelien



Bug#1061018: marked as done (octave-splines: FTBFS: make: *** [debian/rules:5: binary] Error 134)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 20:25:02 +0100
with message-id 
and subject line Re: Bug#1061018: octave-splines: FTBFS: make: *** 
[debian/rules:5: binary] Error 134
has caused the Debian Bug report #1061018,
regarding octave-splines: FTBFS: make: *** [debian/rules:5: binary] Error 134
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1061018: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061018
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: octave-splines
Version: 1.3.5-2
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20240115 ftbfs-trixie

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
>  debian/rules binary
> dh binary --buildsystem=octave
>dh_update_autotools_config -O--buildsystem=octave
>dh_autoreconf -O--buildsystem=octave
>dh_octave_version -O--buildsystem=octave
> Checking the Octave version... ok
>dh_auto_configure -O--buildsystem=octave
>dh_auto_build -O--buildsystem=octave
>dh_auto_test -O--buildsystem=octave
>create-stamp debian/debhelper-build-stamp
>dh_testroot -O--buildsystem=octave
>dh_prep -O--buildsystem=octave
>dh_auto_install --destdir=debian/octave-splines/ -O--buildsystem=octave
>   octave --no-gui --no-history --silent --no-init-file --no-window-system 
> /usr/share/dh-octave/install-pkg.m 
> /<>/debian/octave-splines/usr/share/octave/packages 
> /<>/debian/octave-splines/usr/lib/x86_64-linux-gnu/octave/packages
> For information about changes from previous versions of the splines package, 
> run 'news splines'.
>dh_octave_check -O--buildsystem=octave
> Checking package...
> Run the unit tests...
> Checking m files ...
> [inst/tps_val_der.m]
> > /<>/inst/tps_val_der.m
> * shared a,b,x,y,x1,x2,y1,c,dy,dy0
>  a = 2; b = -3; x = ([1:2:10 10.5 11.3])'; y = a*x;
>  c = tpaps(x,y,1);
> * assert (a*ones(size(x)), tps_val_der(x,c,x), 1E3*eps);
>  [x1 x2] = meshgrid(x, x);
>  y1 = a*x1+b*x2;
>  c = tpaps([x1(:) x2(:)],y1(:),0.5);
>  dy = tps_val_der([x1(:) x2(:)],c,[x1(:) x2(:)]);
>  dy0 = tps_val_der([x1(:) x2(:)],c,[x1(:) x2(:)],false);
> * assert (a*ones(size(x1(:))), dy(:, 1), 1E3*eps);
> * assert (b*ones(size(x2(:))), dy(:, 2), 1E3*eps); 
> * assert (dy0, dy, 1E3*eps);
> 4 tests, 4 passed, 0 known failure, 0 skipped
> [inst/bin_values.m]
> > /<>/inst/bin_values.m
> * shared x, y, x_bin, y_bin, w_bin, n_bin
>  x = [1; 2; 2; 3; 4];
>  y = [0 0; 1 1; 2 1; 3 4; 5 NaN];
>  [x_bin y_bin w_bin n_bin] = bin_values(x, y);
> * assert (x_bin, [1; 7/3]);
> * assert (y_bin, [0 0; 2 2]);
> * assert (!any(isfinite(w_bin(1, :;
> * assert (w_bin(2, :), [3 1]);
> * assert (n_bin, [1; 3]);
> 5 tests, 5 passed, 0 known failure, 0 skipped
> [inst/csaps_sel.m]
> > /<>/inst/csaps_sel.m
> * shared x,y,ret,p,sigma2,unc_y
>  x = [0:0.01:1]'; y = sin(x);
>  [ret,p,sigma2,unc_y] = csaps_sel(x,y,x);
> malloc(): invalid size (unsorted)
> fatal: caught signal Aborted -- stopping myself...
> Aborted
> make: *** [debian/rules:5: binary] Error 134


The full build log is available from:
http://qa-logs.debian.net/2024/01/15/octave-splines_1.3.5-2_unstable.log

All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20240115;users=lu...@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20240115&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Le mercredi 17 janvier 2024 à 12:47 +0100, Sébastien Villemot a écrit :
> Control: block -1 by 1061049
> 
> Le mardi 16 janvier 2024 à 20:43 +0100, Lucas Nussbaum a écrit :
> > Source: octave-splines
> > Version: 1.3.5-2
> > Severity: serious
> > Justification: FTBFS
> > Tags: trixie sid ftbfs
> > User: lu...@debian.org
> > Usertags: ftbfs-20240115 ftbfs-trixie
> > 
> > Hi,
> > 
> > During a rebuild of all packages in sid, your package failed to build
> > on amd64.
> > 
> > 
> 

Bug#1061017: marked as done (octave-divand: FTBFS: make: *** [debian/rules:5: binary] Error 134)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 20:24:41 +0100
with message-id 
and subject line Re: Bug#1061017: octave-divand: FTBFS: make: *** 
[debian/rules:5: binary] Error 134
has caused the Debian Bug report #1061017,
regarding octave-divand: FTBFS: make: *** [debian/rules:5: binary] Error 134
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1061017: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061017
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: octave-divand
Version: 1.1.2+dfsg-6
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20240115 ftbfs-trixie

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
>  debian/rules binary
> dh binary --buildsystem=octave
>dh_update_autotools_config -O--buildsystem=octave
>dh_autoreconf -O--buildsystem=octave
>dh_octave_version -O--buildsystem=octave
> Checking the Octave version... ok
>dh_auto_configure -O--buildsystem=octave
>dh_auto_build -O--buildsystem=octave
>dh_auto_test -O--buildsystem=octave
>create-stamp debian/debhelper-build-stamp
>dh_testroot -O--buildsystem=octave
>dh_prep -O--buildsystem=octave
>dh_auto_install --destdir=debian/octave-divand/ -O--buildsystem=octave
>   octave --no-gui --no-history --silent --no-init-file --no-window-system 
> /usr/share/dh-octave/install-pkg.m 
> /<>/octave-divand-1.1.2\+dfsg/debian/octave-divand/usr/share/octave/packages
>  
> /<>/octave-divand-1.1.2\+dfsg/debian/octave-divand/usr/lib/x86_64-linux-gnu/octave/packages
> For information about changes from previous versions of the divand package, 
> run 'news divand'.
>dh_octave_check -O--buildsystem=octave
> Checking package...
> Run the unit tests...
> Checking m files ...
> [inst/statevector_init.m]
> > /<>/inst/statevector_init.m
> * test
>  mask = rand(10,10) > .5;
>  mask_u = rand(9,10) > .5;
>  mask_v = rand(10,9) > .5;
>  sv = statevector_init(mask,mask_u,mask_v);
>  var = rand(10,10); 
>  var(mask==0) = 0;
>  var_u = rand(9,10);
>  var_u(mask_u==0) = 0;
>  var(mask==0) = 0;
>  var_v = rand(10,9);
>  var_v(mask_v==0) = 0;
>  [E] = statevector_pack(sv,var,var_u,var_v);
>  [Ezeta2,Eu2,Ev2] = statevector_unpack(sv,E);
>  assert(Ezeta2,var)
>  assert(Eu2,var_u)
>  assert(Ev2,var_v)
> 1 test, 1 passed, 0 known failure, 0 skipped
> Checking C++ files ...
> Run tests in debian/check.m
> [test_divand]
> run test_interp_1d: (max difference=2.77556e-16)   OK  
> run test_interp_2d: (max difference=2.22045e-16)   OK  
> run test_interp_regular: (max difference=2.22045e-16)   OK  
> run test_sparse_diff: (max difference=0)   OK  
> run test_1dvar: malloc(): invalid size (unsorted)
> fatal: caught signal Aborted -- stopping myself...
> Aborted
> make: *** [debian/rules:5: binary] Error 134


The full build log is available from:
http://qa-logs.debian.net/2024/01/15/octave-divand_1.1.2+dfsg-6_unstable.log

All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20240115;users=lu...@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20240115&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Le mercredi 17 janvier 2024 à 12:42 +0100, Sébastien Villemot a écrit :
> Control: block -1 by 1061049
> 
> Le mardi 16 janvier 2024 à 20:43 +0100, Lucas Nussbaum a écrit :
> > Source: octave-divand
> > Version: 1.1.2+dfsg-6
> > Severity: serious
> > Justification: FTBFS
> > Tags: trixie sid ftbfs
> > User: lu...@debian.org
> > Usertags: ftbfs-20240115 ftbfs-trixie
> > 
> > During a rebuild of all packages in sid, your package failed to build
> > on amd64.
> > 
> > 
> > Relevant part (hopefully):
> > >  debian/rules binary
> > > dh binary --buildsystem=octave
> > >dh_update_autotools_config -O--buildsystem=octave
> > >dh_autoreconf -O--buildsystem=octave
> > >dh_octave_version -O--buildsystem=octave
> > > Checki

Bug#1056841: pymatgen: ftbfs with cython 3.0.x

2024-01-19 Thread Drew Parsons

On 2024-01-19 18:52, Drew Parsons wrote:


Hi Andreas, could you push your upstream and pristine-tar branches?
Otherwise we can't use your 2023.12.18 branch.



I see what you mean.  The tag is there, the orig tarball can be 
regenerated with

gbp export-orig.



Bug#1058040: pymatgen: FTBFS with Python 3.12

2024-01-19 Thread Drew Parsons
Source: pymatgen
Followup-For: Bug #1058040

No, other way around. The new monty is causing the problem.
Will need to patch or upgrade pymatgen.



Bug#1058040: pymatgen: FTBFS with Python 3.12

2024-01-19 Thread Drew Parsons
Source: pymatgen
Followup-For: Bug #1058040

Sounds like it will need the new version of monty



Bug#1061155: cron: "crontab -e" does not report "unsafe" mail and so job output can be lost

2024-01-19 Thread Jonathan H N Chin
Package: cron
Version: 3.0pl1-182
Severity: grave
Justification: causes non-serious data loss

Dear Maintainer,


   * What led up to the situation?

1. A user ran "crontab -e"

2. He added the line (note the space):

MAILTO=a...@example.org, b...@example.com


3. He saved and exited

4. No errors were reported to the user.


   * What was the outcome of this action?

Subsequently, jobs ran but output was discarded.

/var/log/syslog contains "UNSAFE MAIL" messages which the user cannot see.


   * What outcome did you expect instead?

At step 4, crontab should have reported an error to the user
and not applied the update.



-- System Information:
Debian Release: trixie/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)

Kernel: Linux 5.15.0-91-generic (SMP w/1 CPU thread)
Kernel taint flags: TAINT_PROPRIETARY_MODULE, TAINT_OOT_MODULE
Locale: LANG=C.UTF-8, LC_CTYPE=C.UTF-8 (charmap=UTF-8), LANGUAGE not set
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)

Versions of packages cron depends on:
ii  cron-daemon-common   3.0pl1-182
ii  init-system-helpers  1.66
ii  libc62.37-13
ii  libpam-runtime   1.5.2-9.1
ii  libpam0g 1.5.2-9.1+b1
ii  libselinux1  3.5-1+b2
ii  sensible-utils   0.0.20

Versions of packages cron recommends:
ii  exim4-daemon-heavy [mail-transport-agent]  4.97-4+b1

Versions of packages cron suggests:
pn  anacron
pn  checksecurity  
ii  logrotate  3.21.0-2

Versions of packages cron is related to:
pn  libnss-ldap   
pn  libnss-ldapd  
pn  libpam-ldap   
pn  libpam-mount  
pn  nis   
pn  nscd  

-- no debconf information



Processed: qiime issues: meaningful titles

2024-01-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> retitle 1060965 q2-feature-classifier: AttributeError: module 'bibtexparser' 
> has no attribute 'bparser'
Bug #1060965 [src:qiime] q2-feature-classifier: FTBFS: dh_auto_test: error: 
pybuild --test -i python{version} -p 3.11 -s custom "--test-args=cd 
{build_dir}; py.test-3 --cov=q2_feature_classifier" returned exit code 13
Bug #1060987 [src:qiime] qiime: FTBFS: AttributeError: module 'bibtexparser' 
has no attribute 'bparser'
Changed Bug title to 'q2-feature-classifier: AttributeError: module 
'bibtexparser' has no attribute 'bparser'' from 'q2-feature-classifier: FTBFS: 
dh_auto_test: error: pybuild --test -i python{version} -p 3.11 -s custom 
"--test-args=cd {build_dir}; py.test-3 --cov=q2_feature_classifier" returned 
exit code 13'.
Changed Bug title to 'q2-feature-classifier: AttributeError: module 
'bibtexparser' has no attribute 'bparser'' from 'qiime: FTBFS: AttributeError: 
module 'bibtexparser' has no attribute 'bparser''.
> retitle 1060987 q2cli: AttributeError: module 'bibtexparser' has no attribute 
> 'bparser'
Bug #1060987 [src:qiime] q2-feature-classifier: AttributeError: module 
'bibtexparser' has no attribute 'bparser'
Bug #1060965 [src:qiime] q2-feature-classifier: AttributeError: module 
'bibtexparser' has no attribute 'bparser'
Changed Bug title to 'q2cli: AttributeError: module 'bibtexparser' has no 
attribute 'bparser'' from 'q2-feature-classifier: AttributeError: module 
'bibtexparser' has no attribute 'bparser''.
Changed Bug title to 'q2cli: AttributeError: module 'bibtexparser' has no 
attribute 'bparser'' from 'q2-feature-classifier: AttributeError: module 
'bibtexparser' has no attribute 'bparser''.
> thank you
Stopping processing here.

Please contact me if you need assistance.
-- 
1060965: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060965
1060987: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060987
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed: q2-feature-classifier merge with qiime/q2cli bug.

2024-01-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> affects 1060965 - q2-feature-classifier
Bug #1060965 [src:qiime] q2-feature-classifier: FTBFS: dh_auto_test: error: 
pybuild --test -i python{version} -p 3.11 -s custom "--test-args=cd 
{build_dir}; py.test-3 --cov=q2_feature_classifier" returned exit code 13
Removed indication that 1060965 affects q2-feature-classifier
> affects 1060965 + q2cli
Bug #1060965 [src:qiime] q2-feature-classifier: FTBFS: dh_auto_test: error: 
pybuild --test -i python{version} -p 3.11 -s custom "--test-args=cd 
{build_dir}; py.test-3 --cov=q2_feature_classifier" returned exit code 13
Added indication that 1060965 affects q2cli
> merge 1060965 1060987
Bug #1060965 [src:qiime] q2-feature-classifier: FTBFS: dh_auto_test: error: 
pybuild --test -i python{version} -p 3.11 -s custom "--test-args=cd 
{build_dir}; py.test-3 --cov=q2_feature_classifier" returned exit code 13
Bug #1060987 [src:qiime] qiime: FTBFS: AttributeError: module 'bibtexparser' 
has no attribute 'bparser'
Merged 1060965 1060987
> affects 1060965 + q2-feature-classifier
Bug #1060965 [src:qiime] q2-feature-classifier: FTBFS: dh_auto_test: error: 
pybuild --test -i python{version} -p 3.11 -s custom "--test-args=cd 
{build_dir}; py.test-3 --cov=q2_feature_classifier" returned exit code 13
Bug #1060987 [src:qiime] qiime: FTBFS: AttributeError: module 'bibtexparser' 
has no attribute 'bparser'
Added indication that 1060965 affects q2-feature-classifier
Added indication that 1060987 affects q2-feature-classifier
> thank you
Stopping processing here.

Please contact me if you need assistance.
-- 
1060965: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060965
1060987: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060987
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#1060965: q2-feature-classifier: FTBFS due to qiime AttributeError: module 'bibtexparser' has no attribute 'bparser'

2024-01-19 Thread Étienne Mollier
Control: reassign -1 src:qiime 2022.11.1-2
Control: affects -1 + q2-feature-classifier
Control: merge -1 1060987

This is another manifestation of #1060987, this time affecting
q2-feature-classifier:
> /usr/lib/python3/dist-packages/qiime2/core/cite.py:26: in load
> parser = bp.bparser.BibTexParser()
> E   AttributeError: module 'bibtexparser' has no attribute 'bparser'

Have a nice day,  :)
-- 
  .''`.  Étienne Mollier 
 : :' :  pgp: 8f91 b227 c7d6 f2b1 948c  8236 793c f67e 8f0d 11da
 `. `'   sent from /dev/pts/2, please excuse my verbosity
   `-


signature.asc
Description: PGP signature


Processed (with 1 error): q2-feature-classifier: FTBFS due to qiime AttributeError: module 'bibtexparser' has no attribute 'bparser'

2024-01-19 Thread Debian Bug Tracking System
Processing control commands:

> reassign -1 src:qiime 2022.11.1-2
Bug #1060965 [src:q2-feature-classifier] q2-feature-classifier: FTBFS: 
dh_auto_test: error: pybuild --test -i python{version} -p 3.11 -s custom 
"--test-args=cd {build_dir}; py.test-3 --cov=q2_feature_classifier" returned 
exit code 13
Bug reassigned from package 'src:q2-feature-classifier' to 'src:qiime'.
No longer marked as found in versions q2-feature-classifier/2023.7.0-1.
Ignoring request to alter fixed versions of bug #1060965 to the same values 
previously set
Bug #1060965 [src:qiime] q2-feature-classifier: FTBFS: dh_auto_test: error: 
pybuild --test -i python{version} -p 3.11 -s custom "--test-args=cd 
{build_dir}; py.test-3 --cov=q2_feature_classifier" returned exit code 13
Marked as found in versions qiime/2022.11.1-2.
> affects -1 + q2-feature-classifier
Bug #1060965 [src:qiime] q2-feature-classifier: FTBFS: dh_auto_test: error: 
pybuild --test -i python{version} -p 3.11 -s custom "--test-args=cd 
{build_dir}; py.test-3 --cov=q2_feature_classifier" returned exit code 13
Added indication that 1060965 affects q2-feature-classifier
> merge -1 1060987
Bug #1060965 [src:qiime] q2-feature-classifier: FTBFS: dh_auto_test: error: 
pybuild --test -i python{version} -p 3.11 -s custom "--test-args=cd 
{build_dir}; py.test-3 --cov=q2_feature_classifier" returned exit code 13
Unable to merge bugs because:
affects of #1060987 is 'q2cli' not 'q2-feature-classifier'
Failed to merge 1060965: Did not alter merged bugs.


-- 
1060965: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060965
1060987: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060987
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed: reassign 1060987 to qiime 2022.11.1-2

2024-01-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 1060987 src:qiime 2022.11.1-2
Bug #1060987 [src:q2cli] qiime: FTBFS: AttributeError: module 'bibtexparser' 
has no attribute 'bparser'
Bug reassigned from package 'src:q2cli' to 'src:qiime'.
No longer marked as found in versions q2cli/2022.11.1-2.
Ignoring request to alter fixed versions of bug #1060987 to the same values 
previously set
Bug #1060987 [src:qiime] qiime: FTBFS: AttributeError: module 'bibtexparser' 
has no attribute 'bparser'
Marked as found in versions qiime/2022.11.1-2.
> thank you
Stopping processing here.

Please contact me if you need assistance.
-- 
1060987: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060987
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed: Move where it was fixed

2024-01-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 1056042 python3-uncertainties
Bug #1056042 [src:xrayutilities] xrayutilities ftbfs with Python 3.12
Bug reassigned from package 'src:xrayutilities' to 'python3-uncertainties'.
No longer marked as found in versions xrayutilities/1.7.4-1.
Ignoring request to alter fixed versions of bug #1056042 to the same values 
previously set
> affects 1056042 src:xrayutilities
Bug #1056042 [python3-uncertainties] xrayutilities ftbfs with Python 3.12
Added indication that 1056042 affects src:xrayutilities
> close 1056042 3.1.7-1
Bug #1056042 [python3-uncertainties] xrayutilities ftbfs with Python 3.12
Marked as fixed in versions uncertainties/3.1.7-1.
Bug #1056042 [python3-uncertainties] xrayutilities ftbfs with Python 3.12
Marked Bug as done
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
1056042: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1056042
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed (with 1 error): q2cli: FTBFS: AttributeError: module 'bibtexparser' has no attribute 'bparser'

2024-01-19 Thread Debian Bug Tracking System
Processing control commands:

> reassign -1 src:qiime/2022.11.1-2
Unknown command or malformed arguments to command.

> retitle -1 qiime: FTBFS: AttributeError: module 'bibtexparser' has no 
> attribute 'bparser'
Bug #1060987 [src:q2cli] q2cli: FTBFS: dh_auto_test: error: pybuild --test 
--test-pytest -i python{version} -p 3.11 returned exit code 13
Changed Bug title to 'qiime: FTBFS: AttributeError: module 'bibtexparser' has 
no attribute 'bparser'' from 'q2cli: FTBFS: dh_auto_test: error: pybuild --test 
--test-pytest -i python{version} -p 3.11 returned exit code 13'.
> affects -1 + q2cli
Bug #1060987 [src:q2cli] qiime: FTBFS: AttributeError: module 'bibtexparser' 
has no attribute 'bparser'
Added indication that 1060987 affects q2cli

-- 
1060987: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060987
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#1060987: q2cli: FTBFS: AttributeError: module 'bibtexparser' has no attribute 'bparser'

2024-01-19 Thread Étienne Mollier
Control: reassign -1 src:qiime/2022.11.1-2
Control: retitle -1 qiime: FTBFS: AttributeError: module 'bibtexparser' has no 
attribute 'bparser'
Control: affects -1 + q2cli

This looks to be the main issue:
> /usr/lib/python3/dist-packages/qiime2/core/cite.py:26: in load
> parser = bp.bparser.BibTexParser()
> E   AttributeError: module 'bibtexparser' has no attribute 'bparser'

Since update of bibtexparser to 2.0.0b, the bparser has been
either removed or not reimplemented yet.  The documentation
exposed in the bibtexparser source code gives little clue how to
migrate from that particular situation.  Quick lookup at
contemporary qiime source code[1] shows the invocation is still
around as of today, so an upstream version bump won't help yet.

Maybe an option could be to avoid attemting to apply the bibtex
parser customization when the bparser does not exist anymore?
I'm not entirely confident on the side effects downstream.  Only
other option I can think of would be to wait and see how the
bibtexparser v2.0.0 release will behave if there are planned
changes on the parser or unicode customizations front.

[1]: https://github.com/qiime2/qiime2/blob/dev/qiime2/core/cite.py

Have a nice day,  :)
-- 
  .''`.  Étienne Mollier 
 : :' :  pgp: 8f91 b227 c7d6 f2b1 948c  8236 793c f67e 8f0d 11da
 `. `'   sent from /dev/pts/3, please excuse my verbosity
   `-on air: Fish - Little Man What Now?


signature.asc
Description: PGP signature


Bug#1056841: pymatgen: ftbfs with cython 3.0.x

2024-01-19 Thread Drew Parsons

On 2024-01-16 17:55, Andreas Tille wrote:

Control: tags -1 pending

Hi,

I've applied the patch in Git and also tried to upgrade to latest
upstream since there is a chance that other Python3.12 issues might be
fixed.  Unfortunately the upgrade is all but straightforward and
I gave up finally over the changes in the sphinx documention where
finally some files are missing.  I've created a branch 2023.12.18
which fails with

  Sphinx error:
  root file /build/pymatgen-2023.12.18+dfsg1/docs/apidoc/index.rst not 
found


I hope that my preliminary work might be helpful for the package
but I have to give up now due to time constraints.

Hope this helps
   Andreas.


Hi Andreas, could you push your upstream and pristine-tar branches?
Otherwise we can't use your 2023.12.18 branch.

Drew



Bug#1060970: marked as done (openturns: FTBFS: make[2]: *** [Makefile:94: test] Error 8)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 17:40:12 +
with message-id 
and subject line Bug#1061049: fixed in suitesparse 1:7.5.1+dfsg-2
has caused the Debian Bug report #1061049,
regarding openturns: FTBFS: make[2]: *** [Makefile:94: test] Error 8
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1061049: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061049
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: openturns
Version: 1.21.1-4
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20240115 ftbfs-trixie

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
> make[2]: Entering directory '/<>/builddir'
> Running tests...
> /usr/bin/ctest --force-new-ctest-process -j8  -R cppcheck
> Test project /<>/builddir
> Start   1: cppcheck_Object_std
> Start   2: cppcheck_OStream_std
> Start   3: cppcheck_PersistentObject_std
> Start   4: cppcheck_Pointer_std
> Start   5: cppcheck_Pointer_cast
> Start   6: cppcheck_Exception_std
> Start   7: cppcheck_Log_std
> Start   8: cppcheck_IdFactory_std
>   1/530 Test   #4: cppcheck_Pointer_std 
> .   Passed0.08 sec
> Start   9: cppcheck_ComparisonOperator_std
>   2/530 Test   #1: cppcheck_Object_std 
> ..   Passed0.09 sec
> Start  10: cppcheck_Study_saveload
>   3/530 Test   #2: cppcheck_OStream_std 
> .   Passed0.11 sec
> Start  11: cppcheck_Study_h5
>   4/530 Test   #5: cppcheck_Pointer_cast 
>    Passed0.11 sec
> Start  12: cppcheck_ResourceMap_std
>   5/530 Test   #8: cppcheck_IdFactory_std 
> ...   Passed0.12 sec
> Start  13: cppcheck_Catalog_std
>   6/530 Test   #3: cppcheck_PersistentObject_std 
>    Passed0.13 sec
> Start  14: cppcheck_AtomicInt_std
>   7/530 Test   #6: cppcheck_Exception_std 
> ...   Passed0.13 sec
> Start  15: cppcheck_Collection_std
>   8/530 Test   #7: cppcheck_Log_std 
> .   Passed0.19 sec
> Start  16: cppcheck_Indices_std
>   9/530 Test   #9: cppcheck_ComparisonOperator_std 
> ..   Passed0.12 sec
> Start  17: cppcheck_IndicesCollection_std
>  10/530 Test  #12: cppcheck_ResourceMap_std 
> .   Passed0.11 sec
> Start  18: cppcheck_Description_std
>  11/530 Test  #13: cppcheck_Catalog_std 
> .   Passed0.11 sec
> Start  19: cppcheck_Point_std
>  12/530 Test  #15: cppcheck_Collection_std 
> ..   Passed0.22 sec
> Start  20: cppcheck_Point_description
>  13/530 Test  #16: cppcheck_Indices_std 
> .   Passed0.23 sec
> Start  21: cppcheck_Matrix_std
>  14/530 Test  #17: cppcheck_IndicesCollection_std 
> ...   Passed0.28 sec
> Start  22: cppcheck_SparseMatrix_std
>  15/530 Test  #18: cppcheck_Description_std 
> .   Passed0.27 sec
> Start  23: cppcheck_IdentityMatrix_std
>  16/530 Test  #19: cppcheck_Point_std 
> ...   Passed0.26 sec
> Start  24: cppcheck_Tensor_std
>  17/530 Test  #21: cppcheck_Matrix_std 
> ..   Passed0.19 sec
> Start  25: cppcheck_ComplexTensor_std
>  18/530 Test  #14: cppcheck_AtomicInt_std 
> ...   Passed0.51 sec
> Start  26: cppcheck_SymmetricTensor_std
>  19/530 Test  #24: cppcheck_Tensor_std 
> ..   Passed0.18 sec
> Start  27: cppcheck_SquareMatrix_std
>  20/530 Test  #23: cppcheck_IdentityMatrix_std 
> ..   Passed0.21 sec
> Start  28: cppcheck_TriangularMatrix_std
>  21/530 Test  #22: cppcheck_SparseMatrix_std 
>    Passed0.23 sec
> Start  29: cppcheck_SymmetricMatrix_std
>  22/530 Test  #20: cppcheck_Point_description 
> .

Bug#1061123: marked as done (suitesparse breaks octave autopkgtest: it hangs)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 17:40:12 +
with message-id 
and subject line Bug#1061049: fixed in suitesparse 1:7.5.1+dfsg-2
has caused the Debian Bug report #1061049,
regarding suitesparse breaks octave autopkgtest: it hangs
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1061049: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061049
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---

Source: suitesparse, octave
Control: found -1 suitesparse/1:7.5.1+dfsg-1
Control: found -1 octave/8.4.0-1
Severity: serious
Tags: sid trixie
User: debian...@lists.debian.org
Usertags: breaks needs-update

Dear maintainer(s),

With a recent upload of suitesparse the autopkgtest of octave fails in 
testing when that autopkgtest is run with the binary packages of 
suitesparse from unstable. It passes when run with only packages from 
testing. In tabular form:


   passfail
suitesparsefrom testing1:7.5.1+dfsg-1
octave from testing8.4.0-1
all others from testingfrom testing

I copied some of the output at the bottom of this report. Normally the 
test only takes a couple of minutes, now it times out after 2:47 hours. 
I'm notifying you already as this is currently also impacting the perl 
transition via texinfo.


Currently this regression is blocking the migration of suitesparse to 
testing [1]. Due to the nature of this issue, I filed this bug report 
against both packages. Can you please investigate the situation and 
reassign the bug to the right package?


More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation

Paul

[1] https://qa.debian.org/excuses.php?package=suitesparse

https://ci.debian.net/data/autopkgtest/testing/amd64/o/octave/41870107/log.gz

 94s  94s Integrated test scripts:
 94s  94s   liboctave/array/Array-base.cc-tst 
.. pass   21/21   94s 
liboctave/array/CMatrix.cc-tst . pass 
11/11   94s   liboctave/array/CSparse.cc-tst 
. pass   10/10   94s 
liboctave/array/Sparse.cc-tst .. pass 
107/107  94s   liboctave/array/dMatrix.cc-tst 
. pass   10/10   94s 
liboctave/array/dSparse.cc-tst . pass 
12/12   94s   liboctave/array/fCMatrix.cc-tst 
 pass   11/11   94s 
liboctave/array/fMatrix.cc-tst . pass 
8/894s   liboctave/array/idx-vector.cc-tst 
.. pass2/294s 
liboctave/util/oct-inttypes.cc-tst . pass 
28/28   94s   libinterp/corefcn/Cell.cc-tst 
.. pass5/594s 
libinterp/corefcn/__contourc__.cc-tst .. pass 
1/194s   libinterp/corefcn/__dsearchn__.cc-tst 
.. pass1/194s 
libinterp/corefcn/__eigs__.cc-tst .. pass 
1/194s   libinterp/corefcn/__ichol__.cc-tst 
. pass1/194s 
libinterp/corefcn/__ilu__.cc-tst ... pass 
1/195s   libinterp/corefcn/__isprimelarge__.cc-tst 
.. pass   10/10   95s 
libinterp/corefcn/__lin_interpn__.cc-tst ... pass 
1/195s   libinterp/corefcn/__magick_read__.cc-tst 
... pass4/495s 
libinterp/corefcn/__pchip_deriv__.cc-tst ... pass 
4/495s   libinterp/corefcn/__qp__.cc-tst 
 pass1/195s 
libinterp/corefcn/amd.cc-tst ... pass 
4/495s   libinterp/corefcn/besselj.cc-tst 
... pass  200/200  96s 
libinterp/corefcn/bitfcns.cc-tst ... pass 
60/60  100s   libinterp/corefcn/bsxfun.cc-tst 
 pass   82/82  100s 
libinterp/corefcn/call-stack.cc-tst  pass 
3/3   102s   libinterp/corefcn/cellfun.cc-tst 
... pass  134/134 102s 
libinterp/corefcn/chol.cc-tst 
..malloc(): invalid size (unsorted)
10094s fatal: caught signal autopkgtest [06:55:22]: ERROR: timed out on 
command "su -s /bin/bash debci -c set -e; exec 
/tmp/autopkgtest-lxc.gixhwtgb/downtmp/wrapper.sh 
--artifacts=/tmp/autopkgtest-lxc.gixhwtgb/downtmp/upstream-testsuite-artifacts 
--chdir=/tmp/autopkgt

Bug#1060952: marked as done (persalys: FTBFS: make[2]: *** [Makefile:94: test] Error 8)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 17:40:12 +
with message-id 
and subject line Bug#1061049: fixed in suitesparse 1:7.5.1+dfsg-2
has caused the Debian Bug report #1061049,
regarding persalys: FTBFS: make[2]: *** [Makefile:94: test] Error 8
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1061049: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061049
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: persalys
Version: 15.0+ds-3
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20240115 ftbfs-trixie

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
> make[2]: Entering directory '/<>/builddir'
> Running tests...
> /usr/bin/ctest --force-new-ctest-process -j8 -R pyinstallcheck
> Test project /<>/builddir
>   Start 23: pyinstallcheck_SymbolicPhysicalModel_std
>   Start 24: pyinstallcheck_PythonPhysicalModel_std
>   Start 25: pyinstallcheck_PythonPhysicalModel_mp
>   Start 26: pyinstallcheck_DesignOfExperiment_mp
>   Start 27: pyinstallcheck_CouplingPhysicalModel_std
>   Start 28: pyinstallcheck_AnsysParser_std
>   Start 29: pyinstallcheck_CouplingPhysicalModel_logistic
>   Start 30: pyinstallcheck_features
>  1/47 Test #30: pyinstallcheck_features .   
> Passed0.60 sec
>   Start 31: pyinstallcheck_Cogeneration_std
>  2/47 Test #23: pyinstallcheck_SymbolicPhysicalModel_std    
> Passed0.64 sec
>   Start 32: pyinstallcheck_Crue_std
>  3/47 Test #28: pyinstallcheck_AnsysParser_std ..   
> Passed0.72 sec
>   Start 33: pyinstallcheck_DesignOfExperiment_std
>  4/47 Test #29: pyinstallcheck_CouplingPhysicalModel_logistic ...   
> Passed0.78 sec
>   Start 34: pyinstallcheck_AxialStressedBeam_std
>  5/47 Test #26: pyinstallcheck_DesignOfExperiment_mp    
> Passed0.79 sec
>   Start 35: pyinstallcheck_CantileverBeam_std
>  6/47 Test #24: pyinstallcheck_PythonPhysicalModel_std ..   
> Passed1.16 sec
>   Start 36: pyinstallcheck_DataModel_std
>  7/47 Test #25: pyinstallcheck_PythonPhysicalModel_mp ...   
> Passed1.22 sec
>   Start 37: pyinstallcheck_FunctionalChaosAnalysis_std
>  8/47 Test #32: pyinstallcheck_Crue_std .   
> Passed0.82 sec
>   Start 38: pyinstallcheck_KrigingAnalysis_std
>  9/47 Test #33: pyinstallcheck_DesignOfExperiment_std ...   
> Passed0.81 sec
>   Start 39: pyinstallcheck_MetaModelAnalysis_std
> 10/47 Test #34: pyinstallcheck_AxialStressedBeam_std    
> Passed0.82 sec
>   Start 40: pyinstallcheck_PolynomialRegressionAnalysis_std
> 11/47 Test #39: pyinstallcheck_MetaModelAnalysis_std 
> ***Failed0.53 sec
> *** stack smashing detected ***: terminated
> Aborted
> 
>   Start 41: pyinstallcheck_MonteCarloAnalysis_std
> 12/47 Test #37: pyinstallcheck_FunctionalChaosAnalysis_std ..   
> Passed0.86 sec
>   Start 42: pyinstallcheck_MonteCarloReliabilityAnalysis_std
> 13/47 Test #36: pyinstallcheck_DataModel_std    
> Passed0.94 sec
>   Start 43: pyinstallcheck_ImportanceSamplingAnalysis_std
> 14/47 Test #35: pyinstallcheck_CantileverBeam_std ...   
> Passed1.47 sec
>   Start 44: pyinstallcheck_FORMAnalysis_std
> 15/47 Test #38: pyinstallcheck_KrigingAnalysis_std ..   
> Passed0.83 sec
>   Start 45: pyinstallcheck_SORMAnalysis_std
> 16/47 Test #31: pyinstallcheck_Cogeneration_std .   
> Passed1.92 sec
>   Start 46: pyinstallcheck_FORMImportanceSamplingAnalysis_std
> 17/47 Test #42: pyinstallcheck_MonteCarloReliabilityAnalysis_std    
> Passed0.60 sec
>   Start 47: pyinstallcheck_TaylorExpansionMomentsAnalysis_std
> 18/47 Test #27: pyinstallcheck_CouplingPhysicalModel_std    
> Passed2.82 sec
>   Start 48: pyinstallcheck_SobolAnalysis_std
> 19/47 Test #44: pyinstallcheck_FORMAnalysis_std .   
> Passed0.58 sec
>   Start 49: pyinstallcheck_SRCAnalysis_std
> 20/47 Test #43: pyinstallcheck_ImportanceSamplingAnalysis_std ...   
> Passed0.80 sec
>   Start 50: pyinstallcheck_LimitState_std
> 21/47 Test #45: pyinstallcheck_SORMAnalysis_std .   
> Passed0.65 sec
>   Start 51: pyins

Bug#1061049: marked as done (libsuitesparse-dev: libsuitesparse-dev 7.4.0 has an ABI break in libcholmod5 without bumping to "libcholmod6")

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 17:40:12 +
with message-id 
and subject line Bug#1061049: fixed in suitesparse 1:7.5.1+dfsg-2
has caused the Debian Bug report #1061049,
regarding libsuitesparse-dev: libsuitesparse-dev 7.4.0 has an ABI break in 
libcholmod5 without bumping to "libcholmod6"
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1061049: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061049
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: libsuitesparse-dev
Version: 1:7.3.1+dfsg-2
Severity: serious
X-Debbugs-Cc: none, Dima Kogan 

Hi. I'm chasing down

  http://bugs.debian.org/1060986

The problem is that mrcal uses libdogleg, which contains

  typedef struct
  {
cholmod_common  common;

  } dogleg_solverContext_t;

The existing "libdogleg2" package was built against libsuitesparse-dev
7.3, so it must be linked with packages that use that ABI. But in
suitesparse 7.4 the cholmod_common structure has a new member at the
end:

FILE *blas_dump ;  // only used if CHOLMOD is compiled with -DBLAS_DUMP

This is in CHOLMOD/Include/cholmod.h

This extra member changes sizeof(cholmod_common), which changes the ABI,
causing the crash. One way to fix this is to bump the SONAME of
libcholmod.

Thanks.
--- End Message ---
--- Begin Message ---
Source: suitesparse
Source-Version: 1:7.5.1+dfsg-2
Done: Sébastien Villemot 

We believe that the bug you reported is fixed in the latest version of
suitesparse, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1061...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Sébastien Villemot  (supplier of updated suitesparse 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Fri, 19 Jan 2024 17:54:36 +0100
Source: suitesparse
Architecture: source
Version: 1:7.5.1+dfsg-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Sébastien Villemot 
Closes: 1061049
Changes:
 suitesparse (1:7.5.1+dfsg-2) unstable; urgency=medium
 .
   * cholmod-abi-fix.patch: new patch taken from upstream.
 Reverts ABI break introduced in suitesparse 1:7.4.0+dfsg-1.
 (Closes: #1061049)
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Bug#1061126: marked as done (mysql-8.0: Security fixes from January 2024 CPU)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 17:17:45 +
with message-id 
and subject line Bug#1061126: fixed in mysql-8.0 8.0.36-1
has caused the Debian Bug report #1061126,
regarding mysql-8.0: Security fixes from January 2024 CPU
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1061126: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061126
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: mysql-8.0
Version: 8.0.35-1
Severity: grave
Tags: security upstream
Justification: user security hole
X-Debbugs-Cc: car...@debian.org, Debian Security Team 

Hi,

See
https://www.oracle.com/security-alerts/cpujan2024.html#AppendixMSQL
for a list of CVEs affecting src:mysql-8.0.

Regards,
Salvatore
--- End Message ---
--- Begin Message ---
Source: mysql-8.0
Source-Version: 8.0.36-1
Done: Lena Voytek 

We believe that the bug you reported is fixed in the latest version of
mysql-8.0, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1061...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Lena Voytek  (supplier of updated mysql-8.0 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Wed, 17 Jan 2024 09:23:59 -0700
Source: mysql-8.0
Built-For-Profiles: noudeb
Architecture: source
Version: 8.0.36-1
Distribution: unstable
Urgency: medium
Maintainer: Debian MySQL Maintainers 
Changed-By: Lena Voytek 
Closes: 1061126
Launchpad-Bugs-Fixed: 1999075 2024276
Changes:
 mysql-8.0 (8.0.36-1) unstable; urgency=medium
 .
   [ Lena Voytek ]
   * Imported upstream version 8.0.36 to fix security issues
 - https://www.oracle.com/security-alerts/cpujan2024.html#AppendixMSQL
 - CVE-2023-5363 CVE-2023-39975 CVE-2024-20960 CVE-2024-20961 CVE-2024-20962
   CVE-2024-20963 CVE-2024-20964 CVE-2024-20965 CVE-2024-20966
   CVE-2024-20967 CVE-2024-20968 CVE-2024-20969 CVE-2024-20970
   CVE-2024-20971 CVE-2024-20972 CVE-2024-20973 CVE-2024-20974
   CVE-2024-20975 CVE-2024-20976 CVE-2024-20977 CVE-2024-20978
   CVE-2024-20981 CVE-2024-20982 CVE-2024-20983 CVE-2024-20984
   CVE-2024-20985
 Upstream release notes:
 - https://dev.mysql.com/doc/relnotes/mysql/8.0/en/news-8-0-36.html
 (Closes: #1061126)
   * d/p/revert_faster_tls_model.patch: Refresh
 .
   [ Marc Deslauriers ]
   * Removed patch no longer needed with 8.0.35
 - debian/patches/revert-be8348a7.patch: fix crash on startup on armhf
   * Enable test suite on armhf (LP: #2024276)
 - debian/rules: check for failures in armhf tests
 - debian/patches/suppress_armhf_test_warning.patch: suppress warning
   about the CYCLE timer not being available on armhf. (LP: #1999075)
 - debian/patches/disable_64bits_time_armhf.patch: specify armhf doesn't
   have a 64bit timer in mysql-test/include/have_64bits_time.inc.
Checksums-Sha1:
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mysql-8.0_8.0.36-1.debian.tar.xz
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mysql-8.0_8.0.36-1_source.buildinfo
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mysql-8.0_8.0.36.orig.tar.gz
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mysql-8.0_8.0.36.orig.tar.gz.asc
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mysql-8.0_8.0.36-1.debian.tar.xz
 22a84e4c2ca992d56e820b7b8e1

Processed: tagging 1061049

2024-01-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> tags 1061049 - ftbfs
Bug #1061049 [libsuitesparse-dev] libsuitesparse-dev: libsuitesparse-dev 7.4.0 
has an ABI break in libcholmod5 without bumping to "libcholmod6"
Bug #1060952 [libsuitesparse-dev] persalys: FTBFS: make[2]: *** [Makefile:94: 
test] Error 8
Bug #1060970 [libsuitesparse-dev] openturns: FTBFS: make[2]: *** [Makefile:94: 
test] Error 8
Bug #1061123 [libsuitesparse-dev] suitesparse breaks octave autopkgtest: it 
hangs
Removed tag(s) ftbfs.
Removed tag(s) ftbfs.
Removed tag(s) ftbfs.
Removed tag(s) ftbfs.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
1060952: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060952
1060970: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060970
1061049: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061049
1061123: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061123
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed: RC bugs in openturns and persalys are caused by recent suitesparse update

2024-01-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 1060952 libsuitesparse-dev
Bug #1060952 [src:persalys] persalys: FTBFS: make[2]: *** [Makefile:94: test] 
Error 8
Bug reassigned from package 'src:persalys' to 'libsuitesparse-dev'.
No longer marked as found in versions persalys/15.0+ds-3.
Ignoring request to alter fixed versions of bug #1060952 to the same values 
previously set
> reassign 1060970 libsuitesparse-dev
Bug #1060970 [src:openturns] openturns: FTBFS: make[2]: *** [Makefile:94: test] 
Error 8
Bug reassigned from package 'src:openturns' to 'libsuitesparse-dev'.
No longer marked as found in versions openturns/1.21.1-4.
Ignoring request to alter fixed versions of bug #1060970 to the same values 
previously set
> forcemerge 1061049 1060952 1060970
Bug #1061049 [libsuitesparse-dev] libsuitesparse-dev: libsuitesparse-dev 7.4.0 
has an ABI break in libcholmod5 without bumping to "libcholmod6"
Bug #1061123 [libsuitesparse-dev] suitesparse breaks octave autopkgtest: it 
hangs
Bug #1060952 [libsuitesparse-dev] persalys: FTBFS: make[2]: *** [Makefile:94: 
test] Error 8
Set Bug forwarded-to-address to 
'https://github.com/DrTimothyAldenDavis/SuiteSparse/issues/741'.
1061018 was blocked by: 1061123 1061049
1061018 was not blocking any bugs.
Added blocking bug(s) of 1061018: 1060952
1061017 was blocked by: 1061123 1061049
1061017 was not blocking any bugs.
Added blocking bug(s) of 1061017: 1060952
1060986 was blocked by: 1061049 1061123
1060986 was not blocking any bugs.
Added blocking bug(s) of 1060986: 1060952
Added indication that 1060952 affects ceres-solver,octave,libdogleg2
Marked as found in versions suitesparse/1:7.4.0+dfsg-1.
Added tag(s) upstream.
Bug #1061049 [libsuitesparse-dev] libsuitesparse-dev: libsuitesparse-dev 7.4.0 
has an ABI break in libcholmod5 without bumping to "libcholmod6"
Added tag(s) ftbfs.
Added tag(s) ftbfs.
Bug #1060970 [libsuitesparse-dev] openturns: FTBFS: make[2]: *** [Makefile:94: 
test] Error 8
Set Bug forwarded-to-address to 
'https://github.com/DrTimothyAldenDavis/SuiteSparse/issues/741'.
1061017 was blocked by: 1060952 1061123 1061049
1061017 was not blocking any bugs.
Added blocking bug(s) of 1061017: 1060970
1060986 was blocked by: 1061049 1061123 1060952
1060986 was not blocking any bugs.
Added blocking bug(s) of 1060986: 1060970
1061018 was blocked by: 1061049 1061123 1060952
1061018 was not blocking any bugs.
Added blocking bug(s) of 1061018: 1060970
Added indication that 1060970 affects ceres-solver,octave,libdogleg2
Marked as found in versions suitesparse/1:7.4.0+dfsg-1.
Added tag(s) upstream.
Bug #1061123 [libsuitesparse-dev] suitesparse breaks octave autopkgtest: it 
hangs
Merged 1060952 1060970 1061049 1061123
> affects 1061049 + src:openturns src:persalys
Bug #1061049 [libsuitesparse-dev] libsuitesparse-dev: libsuitesparse-dev 7.4.0 
has an ABI break in libcholmod5 without bumping to "libcholmod6"
Bug #1060952 [libsuitesparse-dev] persalys: FTBFS: make[2]: *** [Makefile:94: 
test] Error 8
Bug #1060970 [libsuitesparse-dev] openturns: FTBFS: make[2]: *** [Makefile:94: 
test] Error 8
Bug #1061123 [libsuitesparse-dev] suitesparse breaks octave autopkgtest: it 
hangs
Added indication that 1061049 affects src:openturns and src:persalys
Added indication that 1060952 affects src:openturns and src:persalys
Added indication that 1060970 affects src:openturns and src:persalys
Added indication that 1061123 affects src:openturns and src:persalys
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
1060952: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060952
1060970: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060970
1060986: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060986
1061017: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061017
1061018: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061018
1061049: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061049
1061123: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061123
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed (with 2 errors): RC bugs in openturns and persalys are caused by recent suitesparse update

2024-01-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> forcemerge 1061049 1060952 1060970
Bug #1061049 [libsuitesparse-dev] libsuitesparse-dev: libsuitesparse-dev 7.4.0 
has an ABI break in libcholmod5 without bumping to "libcholmod6"
Bug #1061123 [libsuitesparse-dev] suitesparse breaks octave autopkgtest: it 
hangs
Unable to merge bugs because:
package of #1060970 is 'src:openturns' not 'libsuitesparse-dev'
package of #1060952 is 'src:persalys' not 'libsuitesparse-dev'
Failed to forcibly merge 1061049: Did not alter merged bugs.

> affects 1061049 + src:openturns src:persalys
Failed to mark 1061049 as affecting package(s): failed to get lock on 
/srv/bugs.debian.org/spool/lock/1061049 -- Unable to lock 
/srv/bugs.debian.org/spool/lock/1061049 Resource temporarily unavailable.
Unable to lock /srv/bugs.debian.org/spool/lock/1061049 Resource temporarily 
unavailable at /usr/local/lib/site_perl/Debbugs/Common.pm line 692.
Unable to lock /srv/bugs.debian.org/spool/lock/1061049 Resource temporarily 
unavailable at /usr/local/lib/site_perl/Debbugs/Common.pm line 692.
Unable to lock /srv/bugs.debian.org/spool/lock/1061049 Resource temporarily 
unavailable at /usr/local/lib/site_perl/Debbugs/Common.pm line 692.
Unable to lock /srv/bugs.debian.org/spool/lock/1061049 Resource temporarily 
unavailable at /usr/local/lib/site_perl/Debbugs/Common.pm line 692.
Unable to lock /srv/bugs.debian.org/spool/lock/1061049 Resource temporarily 
unavailable at /usr/local/lib/site_perl/Debbugs/Common.pm line 692.
Unable to lock /srv/bugs.debian.org/spool/lock/1061049 Resource temporarily 
unavailable at /usr/local/lib/site_perl/Debbugs/Common.pm line 692.
Unable to lock /srv/bugs.debian.org/spool/lock/1061049 Resource temporarily 
unavailable at /usr/local/lib/site_perl/Debbugs/Common.pm line 692.
Unable to lock /srv/bugs.debian.org/spool/lock/1061049 Resource temporarily 
unavailable at /usr/local/lib/site_perl/Debbugs/Common.pm line 692.
Unable to lock /srv/bugs.debian.org/spool/lock/1061049 Resource temporarily 
unavailable at /usr/local/lib/site_perl/Debbugs/Common.pm line 692.
 at /usr/local/lib/site_perl/Debbugs/Common.pm line 650.

> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
1060952: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060952
1060970: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060970
1061049: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061049
1061123: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061123
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Processed: Re: armhf: h5py's tests expose unaligned memory accesses during the build

2024-01-19 Thread Debian Bug Tracking System
Processing control commands:

> forwarded 1061063 https://github.com/h5py/h5py/issues/1927
Bug #1061063 [src:h5py] armhf: h5py's tests expose unaligned memory accesses 
during the build
Set Bug forwarded-to-address to 'https://github.com/h5py/h5py/issues/1927'.

-- 
1061063: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061063
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#1061063: armhf: h5py's tests expose unaligned memory accesses during the build

2024-01-19 Thread Drew Parsons
Source: h5py
Followup-For: Bug #1061063
Control: forwarded 1061063 https://github.com/h5py/h5py/issues/1927

The problem was raised upstream at
https://github.com/h5py/h5py/issues/1927

Makes it difficult to test if we can't reproduce it on all armhf
environments.

A patch was suggested for the upstream report but has already been
applied (fix-unaligned-access.patch).

I'm not sure that we can do much more than that, since we can't
reproduce the bug on debian armhf systems.



Bug#1060937: marked as done (ionit: FTBFS: AttributeError: module 'astroid.nodes' has no attribute 'TryExcept')

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 17:04:27 +0100
with message-id <7df9c5244c1140426702f0986cdc5a767d67cafc.ca...@debian.org>
and subject line Re: Bug#1060937: ionit: FTBFS: AttributeError: module 
'astroid.nodes' has no attribute 'TryExcept'
has caused the Debian Bug report #1060937,
regarding ionit: FTBFS: AttributeError: module 'astroid.nodes' has no attribute 
'TryExcept'
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1060937: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1060937
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: ionit
Version: 0.5.0-1.1
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20240115 ftbfs-trixie

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
> make[1]: Entering directory '/<>'
> dh_auto_build
> I: pybuild base:305: /usr/bin/python3 setup.py build 
> running build
> running build_py
> copying ionit_plugin.py -> /<>/.pybuild/cpython3_3.11/build
> running build_scripts
> creating build
> creating build/scripts-3.11
> copying and adjusting ionit -> build/scripts-3.11
> changing mode of build/scripts-3.11/ionit from 644 to 755
> pandoc -s -t man ionit.1.md -o ionit.1
> make[1]: Leaving directory '/<>'
>dh_auto_test -O--buildsystem=pybuild
> I: pybuild base:305: cd /<>/.pybuild/cpython3_3.11/build; 
> python3.11 -m unittest discover -v -s /<>
> test_black (tests.test_black.BlackTestCase.test_black)
> Test: Run black code formatter on Python source code. ... Running following 
> command:
> black --check --diff -l 99 /<>/ionit tests ionit_plugin.py 
> /<>/setup.py
> ok
> test_flake8 (tests.test_flake8.Flake8TestCase.test_flake8)
> Test: Run flake8 on Python source code. ... Running following command:
> /usr/bin/python3.11 -m flake8 --max-line-length=99 /<>/ionit 
> tests ionit_plugin.py /<>/setup.py
> ok
> test_collect_function 
> (tests.test_ionit.TestCollectContext.test_collect_function)
> Test: Run collect_context(["tests/config/function"]) ... ok
> test_collect_static_context 
> (tests.test_ionit.TestCollectContext.test_collect_static_context)
> Test: Run collect_context(["tests/config/static"]) ... ok
> test_configuration_file 
> (tests.test_ionit.TestCollectContext.test_configuration_file)
> Test: Run collect_context(["tests/config/static/second.yaml"]) ... ok
> test_context_stacking 
> (tests.test_ionit.TestCollectContext.test_context_stacking)
> Test: Run collect_context(["tests/config/stacking"]) ... ok
> test_empty_context (tests.test_ionit.TestCollectContext.test_empty_context)
> Test: Run collect_context(["tests/config/empty-context"]) ... ok
> test_empty_python_file 
> (tests.test_ionit.TestCollectContext.test_empty_python_file)
> Test: Run collect_context(["tests/config/empty"]) ... ok
> test_ignoring_additional_files 
> (tests.test_ionit.TestCollectContext.test_ignoring_additional_files)
> Test: Run collect_context(["tests/config/additional-file"]) ... ok
> test_invalid_json (tests.test_ionit.TestCollectContext.test_invalid_json)
> Test: Run collect_context(["tests/config/invalid-json"]) ... ok
> test_invalid_python (tests.test_ionit.TestCollectContext.test_invalid_python)
> Test: Run collect_context(["tests/config/invalid-python"]) ... ok
> test_invalid_yaml (tests.test_ionit.TestCollectContext.test_invalid_yaml)
> Test: Run collect_context(["tests/config/invalid-yaml"]) ... ok
> test_missing_directory 
> (tests.test_ionit.TestCollectContext.test_missing_directory)
> Test: Non-existing context directory ... ok
> test_non_dict_context 
> (tests.test_ionit.TestCollectContext.test_non_dict_context)
> Test failure for collect_context(["tests/config/non-dict"]) ... ok
> test_python_module (tests.test_ionit.TestCollectContext.test_python_module)
> Test: Run collect_context(["tests/config/python"]) ... ok
> test_raise_exception 
> (tests.test_ionit.TestCollectContext.test_raise_exception)
> Test failure for collect_context(["tests/config/exception"]) ... ok
> test_main_append_templates 
> (tests.test_ionit.TestMain.test_main_append_templates)
> Test main() with static context and multiple template directories ... 
> 2024-01-15 20:28:28,536 ionit INFO: Reading configuration file 
> '/<>/tests/config/static/first.json'...
> 2024-01-15 20:28:28,536 ionit INFO: Reading configuration file 
> '/<>/tests/config/static/second.yaml'...
> 2024-01-15 20:28:28,539 ionit INFO: Rendered 
> '/<>/tests/template/static/counting.jinja' to 
> '/<>/tests/template/static/counting'.
> 2024-01-15 20:28:28,540 ionit INFO: Rendered 
> '/<>/test

Bug#1061031: marked as done (bdebstrap: FTBFS: AttributeError: module 'astroid.nodes' has no attribute 'TryExcept')

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 17:04:30 +0100
with message-id 
and subject line Re: Bug#1061031: bdebstrap: FTBFS: AttributeError: module 
'astroid.nodes' has no attribute 'TryExcept'
has caused the Debian Bug report #1061031,
regarding bdebstrap: FTBFS: AttributeError: module 'astroid.nodes' has no 
attribute 'TryExcept'
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1061031: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061031
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: bdebstrap
Version: 0.6.0-1
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20240115 ftbfs-trixie

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
>  debian/rules binary
> dh binary --buildsystem pybuild --with python3
>dh_update_autotools_config -O--buildsystem=pybuild
>dh_autoreconf -O--buildsystem=pybuild
>dh_auto_configure -O--buildsystem=pybuild
> I: pybuild base:305: python3.11 setup.py config 
> running config
>dh_auto_build -O--buildsystem=pybuild
> I: pybuild base:305: /usr/bin/python3 setup.py build 
> running build
> running doc
> running command: pandoc -s -t man bdebstrap.1.md -o bdebstrap.1
> running build_scripts
> creating build
> creating build/scripts-3.11
> copying and adjusting bdebstrap -> build/scripts-3.11
> changing mode of build/scripts-3.11/bdebstrap from 644 to 755
>dh_auto_test -O--buildsystem=pybuild
> I: pybuild base:305: cd /<>/.pybuild/cpython3_3.11/build; 
> python3.11 -m unittest discover -v -s /<>
> test_get_path_exists (tests.TestGetPath.test_get_path_exists)
> Test get_path(__file__). ... ok
> test_get_path_missing (tests.TestGetPath.test_get_path_missing)
> Test non-existing file for get_path(). ... ok
> test_get_path_pybuild (tests.TestGetPath.test_get_path_pybuild)
> Test changing current directory before calling get_path(). ... ok
> test_black (tests.test_black.BlackTestCase.test_black)
> Test: Run black code formatter on Python source code. ... Running following 
> command:
> black --check --diff -l 99 /<>/bdebstrap tests 
> /<>/setup.py
> ok
> test_debug (tests.test_config.TestArguments.test_debug)
> Test --debug argument parsing. ... ok
> test_empty_args (tests.test_config.TestArguments.test_empty_args)
> Test setting arguments to empty strings. ... ok
> test_malformed_env (tests.test_config.TestArguments.test_malformed_env)
> Test malformed --env parameter (missing equal sign). ... ok
> test_mirrors_with_spaces 
> (tests.test_config.TestArguments.test_mirrors_with_spaces)
> Test --mirrors with leading/trailing spaces. ... ok
> test_no_args (tests.test_config.TestArguments.test_no_args)
> Test calling bdebstrap without arguments. ... ok
> test_optional_args (tests.test_config.TestArguments.test_optional_args)
> Test optional arguments (which also have positional ones). ... ok
> test_parse_env (tests.test_config.TestArguments.test_parse_env)
> Test parsing --env parameters. ... ok
> test_positional_args (tests.test_config.TestArguments.test_positional_args)
> Test positional arguments (overwriting optional ones). ... ok
> test_split (tests.test_config.TestArguments.test_split)
> Test splitting comma and space separated values. ... ok
> test_add_command_line_arguments 
> (tests.test_config.TestConfig.test_add_command_line_arguments)
> Test Config.add_command_line_arguments(). ... ok
> test_add_command_line_arguments_no_config 
> (tests.test_config.TestConfig.test_add_command_line_arguments_no_config)
> Test Config.add_command_line_arguments() with no config file. ... ok
> test_check_example (tests.test_config.TestConfig.test_check_example)
> Test example unstable.yaml file. ... ok
> test_commented_packages (tests.test_config.TestConfig.test_commented_packages)
> Test commented-packages.yaml file. ... ok
> test_config_and_arguments 
> (tests.test_config.TestConfig.test_config_and_arguments)
> Test Config.add_command_line_arguments() with config file and arguments. ... 
> ok
> test_env_items (tests.test_config.TestConfig.test_env_items)
> Test environment variables for example unstable.yaml. ... ok
> test_loading (tests.test_config.TestConfig.test_loading)
> Test loading a YAML configuration file. ... ok
> test_sanitize_packages_debs 
> (tests.test_config.TestConfig.test_sanitize_packages_debs)
> Test sanitize_packages method: multiple local .debs ... ok
> test_sanitize_packages_duplicate_debs 
> (tests.test_config.TestConfig.test_sanitize_packages_duplicate_debs)
> Test sanitize_packages method: remove duplicate local .

Bug#1041519: Bug#1042027: transmission 4.0.5-1

2024-01-19 Thread Alexandre Rossi
Hi,

> > please push this packaging effort to a personal (but publicly
> > accessible) git repo on salsa, so that i can cherry pick the changes i
> > like, thanks
> 
> Here:
> 
> 
> https://salsa.debian.org/niol/transmission/-/tree/master-candidate?ref_type=heads

I've also updated my pull request to make it easier to review cherry-picking
the appropriate change.

https://salsa.debian.org/debian/transmission/-/merge_requests/16

Thanks,

Alex



Bug#1042529: marked as done (sogo: Multiple embdeded and minified javascript library)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 15:21:04 +
with message-id 
and subject line Bug#1042529: fixed in sogo 5.9.0-1
has caused the Debian Bug report #1042529,
regarding sogo: Multiple embdeded and minified javascript library
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1042529: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1042529
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: sogo
Severity: serious
Tags: ftbfs security
Justification: FTBFS + security
X-Debbugs-Cc: Debian Security Team 

Dear Maintainer,

https://sources.debian.org/src/sogo/5.8.4-1/UI/WebServerResources/js/vendor/
inlclude a few library precompiled and that seems outdated (bad from a security
point of view due to recent CVE for ckeditor)

Could you deembed and use packaged library

Thanks

Bastien



signature.asc
Description: This is a digitally signed message part.
--- End Message ---
--- Begin Message ---
Source: sogo
Source-Version: 5.9.0-1
Done: Jordi Mallach 

We believe that the bug you reported is fixed in the latest version of
sogo, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1042...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Jordi Mallach  (supplier of updated sogo package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Tue, 28 Nov 2023 09:46:18 +0100
Source: sogo
Architecture: source
Version: 5.9.0-1
Distribution: experimental
Urgency: medium
Maintainer: Debian SOGo Maintainers 

Changed-By: Jordi Mallach 
Closes: 1042529
Changes:
 sogo (5.9.0-1) experimental; urgency=medium
 .
   * New upstream release.
   * Refresh Remove-build-date patch.
   * Fix replacement of vendored JS libraries with packaged versions
 (closes: #1042529).
   * Drop unneeded Build-Depends on js libs.
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Bug#983619: marked as done (vdr-markad: fails to install: chown: invalid user: 'vdr:vdr')

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 13:49:54 +
with message-id 
and subject line Bug#983619: fixed in vdr-plugin-markad 3.4.5-3
has caused the Debian Bug report #983619,
regarding vdr-markad: fails to install: chown: invalid user: 'vdr:vdr'
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
983619: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=983619
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: vdr-markad
Version: 0.1.4+git20180120-3
Severity: serious
User: debian...@lists.debian.org
Usertags: piuparts

Hi,

during a test with piuparts I noticed your package failed to install. As
per definition of the release team this makes the package too buggy for
a release, thus the severity.

>From the attached log (scroll to the bottom...):

  Setting up vdr-markad (0.1.4+git20180120-3) ...
  chown: invalid user: 'vdr:vdr'
  dpkg: error processing package vdr-markad (--configure):
   installed vdr-markad package post-installation script subprocess returned 
error exit status 1
  Processing triggers for libc-bin (2.31-9) ...
  Errors were encountered while processing:
   vdr-markad


cheers,

Andreas


vdr-markad_0.1.4+git20180120-3.log.gz
Description: application/gzip
--- End Message ---
--- Begin Message ---
Source: vdr-plugin-markad
Source-Version: 3.4.5-3
Done: Christoph Martin 

We believe that the bug you reported is fixed in the latest version of
vdr-plugin-markad, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 983...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Christoph Martin  (supplier of updated vdr-plugin-markad 
package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


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Date: Fri, 19 Jan 2024 13:53:46 +0100
Source: vdr-plugin-markad
Architecture: source
Version: 3.4.5-3
Distribution: unstable
Urgency: medium
Maintainer: Debian VDR Team 
Changed-By: Christoph Martin 
Closes: 983619
Changes:
 vdr-plugin-markad (3.4.5-3) unstable; urgency=medium
 .
   * chown vdr /var/lib/markad in plugin package (closes: #983619)
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=laMY
-END PGP SIGNATURE End Message ---


Processed: Bug#1014862 vdr-plugin-markad: FTBFS: Cannot find (any matches for) "command/markad"

2024-01-19 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> notfound 1014862 3.4.5-1
Bug #1014862 [src:vdr-plugin-markad] vdr-plugin-markad: FTBFS: Cannot find (any 
matches for) "command/markad"
Ignoring request to alter found versions of bug #1014862 to the same values 
previously set
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
1014862: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1014862
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#1014862: vdr-plugin-markad: FTBFS: Cannot find (any matches for) "command/markad"

2024-01-19 Thread Christoph Martin

notfound 1014862 3.4.5-1
thanks

In the current build this bug does not exist.


OpenPGP_signature.asc
Description: OpenPGP digital signature


Bug#1052751: marked as done (binutils-mipsen: FTBFS: ld: mips.o:(.data.rel.ro+0x740): undefined reference to `gold::Output_data_reloc_base<9, true, 32, true>::do_adjust_output_section(gold::Output_sec

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 19:36:23 +0800
with message-id 

and subject line Re: Bug#1050431: binutils-mipsen: FTBFS on all architectures
has caused the Debian Bug report #1050431,
regarding binutils-mipsen: FTBFS: ld: mips.o:(.data.rel.ro+0x740): undefined 
reference to `gold::Output_data_reloc_base<9, true, 32, 
true>::do_adjust_output_section(gold::Output_section*)'
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1050431: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1050431
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: binutils-mipsen
Version: 10+c5
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20230925 ftbfs-trixie

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
> /usr/bin/ld: mips.o:./builddir-mips/gold/../../gold/output.h:1276: more 
> undefined references to `gold::Output_reloc<9, true, 32, 
> true>::compare(gold::Output_reloc<9, true, 32, true> const&) const' follow
> /usr/bin/ld: mips.o:(.data.rel.ro+0x740): undefined reference to 
> `gold::Output_data_reloc_base<9, true, 32, 
> true>::do_adjust_output_section(gold::Output_section*)'
> /usr/bin/ld: mips.o:(.data.rel.ro+0xd40): undefined reference to 
> `gold::Output_data_reloc_base<9, true, 32, 
> false>::do_adjust_output_section(gold::Output_section*)'
> /usr/bin/ld: 
> mips.o:(.data.rel.ro._ZTVN4gold22Output_data_reloc_baseILi9ELb1ELi32ELb1EEE[_ZTVN4gold22Output_data_reloc_baseILi9ELb1ELi32ELb1EEE]+0x20):
>  undefined reference to `gold::Output_data_reloc_base<9, true, 32, 
> true>::do_write(gold::Output_file*)'
> /usr/bin/ld: 
> mips.o:(.data.rel.ro._ZTVN4gold22Output_data_reloc_baseILi9ELb1ELi32ELb1EEE[_ZTVN4gold22Output_data_reloc_baseILi9ELb1ELi32ELb1EEE]+0xb0):
>  undefined reference to `gold::Output_data_reloc_base<9, true, 32, 
> true>::do_adjust_output_section(gold::Output_section*)'
> /usr/bin/ld: 
> mips.o:(.data.rel.ro._ZTVN4gold22Output_data_reloc_baseILi9ELb1ELi32ELb0EEE[_ZTVN4gold22Output_data_reloc_baseILi9ELb1ELi32ELb0EEE]+0x20):
>  undefined reference to `gold::Output_data_reloc_base<9, true, 32, 
> false>::do_write(gold::Output_file*)'
> /usr/bin/ld: 
> mips.o:(.data.rel.ro._ZTVN4gold22Output_data_reloc_baseILi9ELb1ELi32ELb0EEE[_ZTVN4gold22Output_data_reloc_baseILi9ELb1ELi32ELb0EEE]+0xb0):
>  undefined reference to `gold::Output_data_reloc_base<9, true, 32, 
> false>::do_adjust_output_section(gold::Output_section*)'
> collect2: error: ld returned 1 exit status


The full build log is available from:
http://qa-logs.debian.net/2023/09/25/binutils-mipsen_10+c5_unstable.log

All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20230925;users=lu...@debian.org
or:
https://udd.debian.org/bugs/?release=na&merged=ign&fnewerval=7&flastmodval=7&fusertag=only&fusertagtag=ftbfs-20230925&fusertaguser=lu...@debian.org&allbugs=1&cseverity=1&ctags=1&caffected=1#results

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
It's now buildable.--- End Message ---


Bug#1050431: marked as done (binutils-mipsen: FTBFS on all architectures)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 19:36:23 +0800
with message-id 

and subject line Re: Bug#1050431: binutils-mipsen: FTBFS on all architectures
has caused the Debian Bug report #1050431,
regarding binutils-mipsen: FTBFS on all architectures
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1050431: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1050431
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: binutils-mipsen
Version: 10+c4
Severity: serious
Tags: ftbfs
Justification: FTBFS
Control: block 1040626 by -1

Dear maintainer,

The latest upload of binutils-mipsen failed to build from source on
all architectures. Apart from this being an issue by itself, it's also
blocking progress in other RC bugs.

https://buildd.debian.org/status/package.php?p=binutils-mipsen&ver=10

Paul

-- System Information:
Debian Release: trixie/sid
  APT prefers testing
  APT policy: (990, 'testing')
Architecture: amd64 (x86_64)

Kernel: Linux 6.4.0-2-amd64 (SMP w/8 CPU threads; PREEMPT)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), 
LANGUAGE=en_US:en
Shell: /bin/sh linked to /usr/bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled
--- End Message ---
--- Begin Message ---
It's now buildable.--- End Message ---


Bug#1052345: src:binutils-mipsen: fails to migrate to testing for too long: FTBFS

2024-01-19 Thread YunQiang Su
It's now buildable.



Bug#1056529: marked as done (sphinx-autoapi's autopkg tests fail with Python 3.12)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 10:49:10 +
with message-id 
and subject line Bug#1056529: fixed in sphinx-autoapi 3.0.0-0.1
has caused the Debian Bug report #1056529,
regarding sphinx-autoapi's autopkg tests fail with Python 3.12
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1056529: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1056529
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---

Package: src:sphinx-autoapi
Version: 2.0.0-2
Severity: important
Tags: sid trixie
User: debian-pyt...@lists.debian.org
Usertags: python3.12

sphinx-autoapi's autopkg tests fail with Python 3.12:

[...]
265s autopkgtest [19:18:48]: test upstream: [---
265s 'tests/' -> '/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests'
265s 'tests/dotnetexample' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/dotnetexample'
265s 'tests/dotnetexample/Makefile' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/dotnetexample/Makefile'
265s 'tests/dotnetexample/README.md' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/dotnetexample/README.md'
265s 'tests/dotnetexample/conf.py' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/dotnetexample/conf.py'
265s 'tests/dotnetexample/example' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/dotnetexample/example'
265s 'tests/dotnetexample/example/clone.sh' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/dotnetexample/example/clone.sh'
265s 'tests/dotnetexample/index.rst' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/dotnetexample/index.rst'
265s 'tests/fixtures' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/fixtures'
265s 'tests/fixtures/dotnet.json' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/fixtures/dotnet.json'
265s 'tests/fixtures/go.json' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/fixtures/go.json'
265s 'tests/fixtures/javascript.json' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/fixtures/javascript.json'
265s 'tests/goexample' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/goexample'
265s 'tests/goexample/conf.py' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/goexample/conf.py'
265s 'tests/goexample/example' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/goexample/example'
265s 'tests/goexample/example/godocjson.go' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/goexample/example/godocjson.go'
265s 'tests/goexample/index.rst' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/goexample/index.rst'
265s 'tests/jsexample' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/jsexample'
265s 'tests/jsexample/conf.py' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/jsexample/conf.py'
265s 'tests/jsexample/example' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/jsexample/example'
265s 'tests/jsexample/example/jsdoc-example.js' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/jsexample/example/jsdoc-example.js'
265s 'tests/jsexample/index.rst' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/jsexample/index.rst'
265s 'tests/python' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/python'
265s 'tests/python/py38positionalparams' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/python/py38positionalparams'
265s 'tests/python/py38positionalparams/conf.py' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/python/py38positionalparams/conf.py'
265s 'tests/python/py38positionalparams/example' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/python/py38positionalparams/example'
265s 'tests/python/py38positionalparams/example/example.py' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/python/py38positionalparams/example/example.py'
265s 'tests/python/py38positionalparams/index.rst' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/python/py38positionalparams/index.rst'
265s 'tests/python/py3example' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/python/py3example'
265s 'tests/python/py3example/conf.py' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/python/py3example/conf.py'
265s 'tests/python/py3example/example' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/python/py3example/example'
265s 'tests/python/py3example/example/example.py' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/python/py3example/example/example.py'
265s 'tests/python/py3example/example/example2.py' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/python/py3example/example/example2.py'
265s 'tests/python/py3example/index.rst' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/python/py3example/index.rst'
265s 'tests/python/py3implicitnamespace' -> 
'/tmp/autopkgtest.wYiNeq/autopkgtest_tmp/tests/pytho

Bug#1058408: marked as pending in sphinx-autoapi

2024-01-19 Thread Matthias Klose
Control: tag -1 pending

Hello,

Bug #1058408 in sphinx-autoapi reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/python-team/packages/sphinx-autoapi/-/commit/8171c970d61aa4183b21033e13b40795ab604852


* Non-maintainer upload.
  * New upstream version. Closes: #1056529, #1058408.
  * Build-depend on  python3-sphinx-design, furo.
  * Still use unidecode instead of anyascii (not yet packaged).
  * Add python-bs4 and python3-packaging as test dependencies.


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/1058408



Processed: Bug#1058408 marked as pending in sphinx-autoapi

2024-01-19 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 pending
Bug #1058408 [src:sphinx-autoapi] sphinx-autoapi: FTBFS: dh_auto_test: error: 
pybuild --test --test-pytest -i python{version} -p "3.12 3.11" returned exit 
code 13
Added tag(s) pending.

-- 
1058408: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1058408
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#1056529: marked as pending in sphinx-autoapi

2024-01-19 Thread Matthias Klose
Control: tag -1 pending

Hello,

Bug #1056529 in sphinx-autoapi reported by you has been fixed in the
Git repository and is awaiting an upload. You can see the commit
message below and you can check the diff of the fix at:

https://salsa.debian.org/python-team/packages/sphinx-autoapi/-/commit/8171c970d61aa4183b21033e13b40795ab604852


* Non-maintainer upload.
  * New upstream version. Closes: #1056529, #1058408.
  * Build-depend on  python3-sphinx-design, furo.
  * Still use unidecode instead of anyascii (not yet packaged).
  * Add python-bs4 and python3-packaging as test dependencies.


(this message was generated automatically)
-- 
Greetings

https://bugs.debian.org/1056529



Processed: Bug#1056529 marked as pending in sphinx-autoapi

2024-01-19 Thread Debian Bug Tracking System
Processing control commands:

> tag -1 pending
Bug #1056529 [src:sphinx-autoapi] sphinx-autoapi's autopkg tests fail with 
Python 3.12
Added tag(s) pending.

-- 
1056529: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1056529
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems



Bug#1055848: Reproducing

2024-01-19 Thread Alastair McKinstry

I've now been able to setup autopkgtest locally based on sbuild.

I get failures in an autopkgtest (sbuild sid) chroot, but not when I do 
a clean pbuilder chroot via sid to do "pbuilder login".


Investigating the differences between what should be identical chroots.


Alastair

--
Alastair McKinstry,
GPG: 82383CE9165B347C787081A2CBE6BB4E5D9AD3A5
ph: +353 87 6847928 e: alast...@mckinstry.ie, im: @alastair:mckinstry.ie



Bug#1061000: marked as done (dqlite: FTBFS: dh_auto_test: error: make -j8 check "TESTSUITEFLAGS=-j8 --verbose" VERBOSE=1 returned exit code 2)

2024-01-19 Thread Debian Bug Tracking System
Your message dated Fri, 19 Jan 2024 09:04:05 +
with message-id 
and subject line Bug#1061000: fixed in dqlite 1.16.0-4
has caused the Debian Bug report #1061000,
regarding dqlite: FTBFS: dh_auto_test: error: make -j8 check 
"TESTSUITEFLAGS=-j8 --verbose" VERBOSE=1 returned exit code 2
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1061000: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1061000
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: dqlite
Version: 1.16.0-3
Severity: serious
Justification: FTBFS
Tags: trixie sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20240115 ftbfs-trixie

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
> make[3]: Entering directory '/<>'
> PASS: unit-test
> FAIL: integration-test
> 
>libdqlite 1.16.0: ./test-suite.log
> 
> 
> # TOTAL: 2
> # PASS:  1
> # SKIP:  0
> # XFAIL: 0
> # FAIL:  1
> # XPASS: 0
> # ERROR: 0
> 
> .. contents:: :depth: 2
> 
> FAIL: integration-test
> ==
> 
> Running test suite with seed 0x48146ffc...
> client/exec 
>   disk_mode=0   [ OK] [ 
> 0.00848620 / 0.00474892 CPU ]
>   disk_mode=1   [ OK] [ 
> 0.00903412 / 0.00310910 CPU ]
> client/execWithOneParam 
>   disk_mode=0   [ OK] [ 
> 0.01107855 / 0.00322604 CPU ]
>   disk_mode=1   [ OK] [ 
> 0.01084037 / 0.00271260 CPU ]
> client/execSql  
>   disk_mode=0   [ OK] [ 
> 0.00588297 / 0.00149010 CPU ]
>   disk_mode=1   [ OK] [ 
> 0.00743165 / 0.00155657 CPU ]
> client/query
>   disk_mode=0   [ OK] [ 
> 0.04957668 / 0.02712912 CPU ]
>   disk_mode=1   [ OK] [ 
> 0.02748792 / 0.01775024 CPU ]
> client/querySql 
>   disk_mode=0   [ OK] [ 
> 0.03543575 / 0.02319791 CPU ]
>   disk_mode=1   [ OK] [ 
> 0.03526996 / 0.01552904 CPU ]
> cluster/restart 
>   num_records=0, disk_mode=0[ OK] [ 
> 0.09370341 / 0.02169809 CPU ]
>   num_records=0, disk_mode=1[ OK] [ 
> 0.12578984 / 0.02156978 CPU ]
>   num_records=1, disk_mode=0[ OK] [ 
> 0.08911703 / 0.02158624 CPU ]
>   num_records=1, disk_mode=1[ OK] [ 
> 0.10179450 / 0.02262160 CPU ]
>   num_records=256, disk_mode=0  [ OK] [ 
> 1.33302500 / 0.36639435 CPU ]
>   num_records=256, disk_mode=1  [ OK] [ 
> 1.09571285 / 0.30773684 CPU ]
>   num_records=993, disk_mode=0  [ OK] [ 
> 4.43455608 / 1.49089326 CPU ]
>   num_records=993, disk_mode=1  [ OK] [ 
> 4.07793608 / 1.49977670 CPU ]
>   num_records=2200, disk_mode=0 [ OK] [ 
> 9.31523289 / 2.74274570 CPU ]
>   num_records=2200, disk_mode=1 [ OK] [ 
> 8.22212519 / 2.03489432 CPU ]
> cluster/dataOnNewNode   
>   num_records=0, disk_mode=0[ OK] [ 
> 1.02777129 / 0.01749712 CPU ]
>   num_records=0, disk_mode=1[ OK] [ 
> 1.02522202 / 0.01251844 CPU ]
>   num_records=1, disk_mode=0[ OK] [ 
> 1.04220156 / 0.01379738 CPU ]
>   num_records=1, disk_mode=1[ OK] [ 
> 1.02847857 / 0.01512479 CPU ]
>   num_records=256, disk_mode=0  [ OK] [ 
> 1.93572853 / 0.23575930 CPU ]
>   num_records=256, disk_mode=1  [ OK] [ 
> 2.27937617 / 0.42763899 CPU ]
>   num_records=993, disk_mode=0  [ ERROR ]
> Error: test/integration/test_cluster.c:165: assertion failed: rv_ == 0 (1 == 
> 0)
> Error: child killed by signal 6 (Ab