Re: [galaxy-user] Help with sam to bam (Zachary A Lewis)

Hi Zach, Would you have time to send this in as a bug report so that we can take a closer look? Format problems are likely the issue, but this can be double checked. To report as a bug, click on the green bug icon in the error dataset's box in your history. If your Galaxy account uses a

[galaxy-user] Fwd: Help with sam to bam

Hi Zach, You should reply to all so people dont keep working on your questions. Glad to help. Austin -- Forwarded message -- From: Zachary A Lewis zle...@uga.edu Date: Tue, Sep 13, 2011 at 3:10 PM Subject: Re: [galaxy-user] Help with sam to bam To: Austin Paul austi...@usc.edu

Re: [galaxy-user] Fwd: Help with sam to bam

Thanks Austin, good suggestions all around. The question came through again, so I didn't realize this was completely solved. Glad this was just a format issue! Take care, Jen Galaxy team On 9/14/11 4:54 PM, Austin Paul wrote: Hi Zach, You should reply to all so people dont keep working on

Re: [galaxy-user] Upload of most recent genome data for Apis mellifera onto Galaxy and/or NCSC web sites?

Hi Diana, As Anton mentioned, we can add this genome to our working list. A check-in with UCSC about their plans for an update seems appropriate and that will be part of our prioritization of this genome. Meanwhile, the fastest way for you to start working with this genome right away is to

[galaxy-user] Merging of illumina paired end files

I have 3 illumina paired end reads of exome capture of the sample. I want to assemble these reads to genome using tools available in Galaxy (BWA etc). My concern is the amount of data that I can analyzed and when these reads should be merged. The total size of data is +30Gb. Thanks, Arun