Re: [Artemis-users] Artemis/Database connectivity
On Thu, 31 Aug 2006 11:34:09 -0400, Andrew Stewart wrote: > I'm looking to use Artemis as an interactive front end to a BioSQL or > Bio::DB::GFF database. I'm aware that Tim Carver is developing > interaction with Chado, but I was wondering if anyone is aware of any > other efforts to connect Artemis up with other schemas. I have dug > up some references to such being done in old mail-list archives I > googled. Some work has been done on Artemis to allow it to use BioJava as a back-end. As far as I know it's read-only and isn't well tested yet. I believe BioJava can connect to BioSQL databases so it may be possible to use BioJava as a bridge between Artemis and BioSQL As an example, I think this works in the current Artemis: art -biojava org.biojava.bio.seq.io.EmblLikeFormat foo.embl Kim. ___ Artemis-users mailing list Artemis-users@sanger.ac.uk http://lists.sanger.ac.uk/mailman/listinfo/artemis-users
Re: [Artemis-users] query on Parallelization --- ACT
Title: Re: [Artemis-users] query on Parallelization --- ACT Hi Mangala ACT is a Java application. As a GUI application it does use multi-threading to spawn separate applications. The main standards and technologies are Java. However there are other technologies it uses, e.g. j2ssh to provide SSH connections. Please let me know if you have other specific questions or want to know more. It may also be good to know where your interests are with ACT. Regards Tim Carver On 1/9/06 12:12, "Mangala" <[EMAIL PROTECTED]> wrote: Hi, Plz anyone clarify me the following questions: 1. Is the ACT app parallelized? If so, please summarize (in a sentence or two). If the app uses a DRM, which one - Grid Engine? Something from , DataSynapse? or Platform? 2. Whar are the Standards or Technologies used (For example, RMI, MPI, DRMMA, etc.) ? Thanx in advance, Mangala.k ___ Artemis-users mailing list Artemis-users@sanger.ac.uk http://lists.sanger.ac.uk/mailman/listinfo/artemis-users ___ Artemis-users mailing list Artemis-users@sanger.ac.uk http://lists.sanger.ac.uk/mailman/listinfo/artemis-users
[Artemis-users] query on Parallelization --- ACT
Hi, Plz anyone clarify me the following questions: 1. Is the ACT app parallelized? If so, please summarize (in a sentence or two). If the app uses a DRM, which one - Grid Engine? Something from , DataSynapse? or Platform? 2. Whar are the Standards or Technologies used (For example, RMI, MPI, DRMMA, etc.) ? Thanx in advance, Mangala.k ___ Artemis-users mailing list Artemis-users@sanger.ac.uk http://lists.sanger.ac.uk/mailman/listinfo/artemis-users
