Re: [Bioc-devel] New Package submission request to Bioconductor Project
Dear Lori : Thanks for your prompt response. Yes, I did follow new package submission guideline from Bioconductor site, package contribution page helped me how to create new issue, Now I opened the issue for new package submission. Thanks again for Bioconductor team on kind evaluation of my packages. Best regards : Jurat On Tue, Dec 20, 2016 at 1:01 PM, Shepherd, Lori < lori.sheph...@roswellpark.org> wrote: > We Thank you for taking the time and diligence to try and have a clean R > CMD check and BiocCheck before submission. If these are your only issues > and you feel the package is ready to be reviewed please submit > http://bioconductor.org/developers/package-submission/ and your assigned > reviewer can assist you further. > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Cancer Institute > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Jurat > Shayidin <juratb...@gmail.com> > *Sent:* Tuesday, December 20, 2016 6:35:52 AM > *To:* bioc-devel@r-project.org > *Subject:* [Bioc-devel] New Package submission request to Bioconductor > Project > > Dear BiocDevel, Bioconductor Team : > > I've read Bioconductor contribution repository, and new package submission > with full instruction, and make sure I am ready to submit my packages -- > MSPC -- to Bioconductor projects. However, my package both succeed with R > CMD check, R CMD BiocCheck without any error, warning. However, R CMD > BiocCheck alarmed me 2 NOTES about indentation issue on my code, and adding > NEWS file. I did add NEWS files where specify list of function in current > version of MSPC packages, but R CMD BiocCheck always gave me same NOTE. > Plus, I fixed code indentation with 4 space tab, but R CMD BiocCheck still > alarmed me that 3% of code needs to re-indent. May be Bioconductor team > guide me how to fix this small issue. To be short, I'll open issue on my > project repository if this mail is sufficient to inform my request. Thanks > a lot. > > Best regards : > > Jurat > > -- > Jurat Shahidin > > Dipartimento di Elettronica, Informazione e Bioingegneria > Politecnico di Milano > Piazza Leonardo da Vinci 32 - 20133 Milano, Italy > Mobile : +39 3279366608 <+39%20327%20936%206608> <+39%20327%20936%206608> > > [[alternative HTML version deleted]] > > ___ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > > This email message may contain legally privileged and/or confidential > information. If you are not the intended recipient(s), or the employee or > agent responsible for the delivery of this message to the intended > recipient(s), you are hereby notified that any disclosure, copying, > distribution, or use of this email message is prohibited. If you have > received this message in error, please notify the sender immediately by > e-mail and delete this email message from your computer. Thank you. -- Jurat Shahidin Dipartimento di Elettronica, Informazione e Bioingegneria Politecnico di Milano Piazza Leonardo da Vinci 32 - 20133 Milano, Italy Mobile : +39 3279366608 <+39%20327%20936%206608> [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
Re: [Bioc-devel] New Package submission request to Bioconductor Project
We Thank you for taking the time and diligence to try and have a clean R CMD check and BiocCheck before submission. If these are your only issues and you feel the package is ready to be reviewed please submit http://bioconductor.org/developers/package-submission/ and your assigned reviewer can assist you further. Lori Shepherd Bioconductor Core Team Roswell Park Cancer Institute Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Jurat Shayidin <juratb...@gmail.com> Sent: Tuesday, December 20, 2016 6:35:52 AM To: bioc-devel@r-project.org Subject: [Bioc-devel] New Package submission request to Bioconductor Project Dear BiocDevel, Bioconductor Team : I've read Bioconductor contribution repository, and new package submission with full instruction, and make sure I am ready to submit my packages -- MSPC -- to Bioconductor projects. However, my package both succeed with R CMD check, R CMD BiocCheck without any error, warning. However, R CMD BiocCheck alarmed me 2 NOTES about indentation issue on my code, and adding NEWS file. I did add NEWS files where specify list of function in current version of MSPC packages, but R CMD BiocCheck always gave me same NOTE. Plus, I fixed code indentation with 4 space tab, but R CMD BiocCheck still alarmed me that 3% of code needs to re-indent. May be Bioconductor team guide me how to fix this small issue. To be short, I'll open issue on my project repository if this mail is sufficient to inform my request. Thanks a lot. Best regards : Jurat -- Jurat Shahidin Dipartimento di Elettronica, Informazione e Bioingegneria Politecnico di Milano Piazza Leonardo da Vinci 32 - 20133 Milano, Italy Mobile : +39 3279366608 <+39%20327%20936%206608> [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
[Bioc-devel] New Package submission request to Bioconductor Project
Dear BiocDevel, Bioconductor Team : I've read Bioconductor contribution repository, and new package submission with full instruction, and make sure I am ready to submit my packages -- MSPC -- to Bioconductor projects. However, my package both succeed with R CMD check, R CMD BiocCheck without any error, warning. However, R CMD BiocCheck alarmed me 2 NOTES about indentation issue on my code, and adding NEWS file. I did add NEWS files where specify list of function in current version of MSPC packages, but R CMD BiocCheck always gave me same NOTE. Plus, I fixed code indentation with 4 space tab, but R CMD BiocCheck still alarmed me that 3% of code needs to re-indent. May be Bioconductor team guide me how to fix this small issue. To be short, I'll open issue on my project repository if this mail is sufficient to inform my request. Thanks a lot. Best regards : Jurat -- Jurat Shahidin Dipartimento di Elettronica, Informazione e Bioingegneria Politecnico di Milano Piazza Leonardo da Vinci 32 - 20133 Milano, Italy Mobile : +39 3279366608 <+39%20327%20936%206608> [[alternative HTML version deleted]] ___ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
