Hi Leonardo,
It is possible that one more skilled than I could get Statistical Paint Report
to do what you want with less trouble. But for me, scripting it via the
command line would be more straightforward. Have a look at two scripts here:
http://brainmap.wustl.edu/pub/donna/WUSTL/BURTON/SCRIPTS/anova_two_way.sh
http://brainmap.wustl.edu/pub/donna/WUSTL/BURTON/SCRIPTS/metric_region_mean.sh
login pub
password download
The anova_two_way.sh one has this bit:
caret_command -surface-region-of-interest-selection $COORD $TOPO $ROI $ROI
-paint $PAINT 1 $PAINT_NAME ANDNOT
And the metric_region_mean.sh has lines that might be handy.
See if you can frankenstein them together to do what you need, because I
suspect you will get tired of selecting each paint name in the Surface: Region
of Interest: select nodes with paint dialog.
Donna
On Jun 29, 2015, at 10:28 AM, Leonardo Cerliani leonardo.cerli...@gmail.com
wrote:
dear Donna,
I am trying to do something apparently simple, but cannot manage, so I would
like to ask your help.
I have loaded the areal expansion overlay onto the caret (contained in the
CARET_TUTORIAL_SEPT06/COMPARE_MACAQUE_HUMAN directory) and I would like to
have an estimate of the areal expansion for each area in the (registered)
LVE00 paint. Basically, an average areal expansion value over each LVE00
region. I tried selecting all the nodes in the paint, and to generate a
statistical report, but I get only the average areal expansion value over all
the cortex. Is it really not possible to do that?
thank you in advance for your help,
leonardo
--
Leonardo Cerliani, PhD
Institut du Cerveau et de la Moelle épinière (ICM)
47 Boulevard de l'Hôpital, UMRS 975
Paris, France
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