[ccp4bb] Fwd: Re: [ccp4bb] Why don't small crystals dissolve

2012-02-08 Thread David Schuller

On 02/08/12 06:49, Enrico Stura wrote:


 On Wed, 08 Feb 2012 12:08:23 +0100, Theresa H. Hsu
 theresah...@live.com  wrote:


 A little off from the original question. Why don't small crystals
 dissolve to make a bigger crystal, especially when the small ones
 grow on top of each other?


Sometimes they do. Key phrase: Ostwald ripening.

http://xray.bmc.uu.se/terese/crystallization/tutorials/tutorial6.html

--
===
All Things Serve the Beam
===
   David J. Schuller
   modern man in a post-modern world
   MacCHESS, Cornell University
   schul...@cornell.edu


Re: [ccp4bb] Why don't small crystals dissolve

2012-02-08 Thread Pius Padayatti
Hi Enricho,
The scenario of streak seeding follows Ostwald ripening but will
this happen in other situations as follows

But in a special case where you have some crystals that appear as large
rods which dissolved when taken out of the incubator (or) during the
observation( these were antibody-complex crystals which were grown in
bicelles(DMPC:CHAPSO
and detergent mixtures and cholestrol, conditions citric acid pH 4.5,
with 2.4 M ammonium sulfate).
The crystals re-apparered in a day over noght incuabtion as heavy
showers of needles with heavy precipitate around.

Very hard to reproduce the conditions.
Still trying to work around these conditions.

Would like to know your thoughts if this is against the laws small
crystals to large crystals (energetically
favoured) conditions.

Also any suggestions welcome for improvements.

Pius


 The answer to your question is very simple.  Small crystals will dissolve
 when the degree of saturation
 of the solution becomes too low to support their relatively high surface to
 volume ratio.
 The larger crystals will still continue to grow because of their higher
 surface/volume ratio but will do so slowly.
 I have achieved the dissolving of small crystals in favour of large ones
 only once with 10 µl drops.
 While it is difficult to achieve this with spontaneously nucleated crystals,
 with seeding thing are very different.
 This phenomenon is an every day observation if you use streak seeding on
 drops that have been
 equilibrated for different amount of time against different concentrations
 of precipitant and you can
 also add an additional variable by using different ratios of protein to
 precipitant in the drop.
 The goal is to seed at a low degree of superstauration. The small seeds will
 be visible along the streak
 immediately after seeding. When you look later on you will see only the
 bigger crystals.
 Streak seeding is great if you want to play this game.

 Enrico.


 On Wed, 08 Feb 2012 12:08:23 +0100, Theresa H. Hsu theresah...@live.com
 wrote:

 A little off from the original question. Why don't small crystals dissolve
 to make a bigger crystal, especially when the small ones grow on top of each
 other? Can the clustered 3D crystals (I think it is called macroscopic twin)
 be used for full data collection?

 Again, thank you.

 Theresa



 --
 Enrico A. Stura D.Phil. (Oxon) ,    Tel: 33 (0)1 69 08 4302 Office
 Room 19, Bat.152,                   Tel: 33 (0)1 69 08 9449    Lab
 LTMB, SIMOPRO, IBiTec-S, CE Saclay, 91191 Gif-sur-Yvette,   FRANCE
 http://www-dsv.cea.fr/en/institutes/institute-of-biology-and-technology-saclay-ibitec-s/unites-de-recherche/department-of-molecular-engineering-of-proteins-simopro/molecular-toxinology-and-biotechnology-laboratory-ltmb/crystallogenesis-e.-stura
 http://www.chem.gla.ac.uk/protein/mirror/stura/index2.html
 e-mail: est...@cea.fr                             Fax: 33 (0)1 69 08 90 71



-- 
Pius S Padayatti,PhD,
Phone: 216-658-4528


Re: [ccp4bb] Why don't small crystals dissolve

2012-02-08 Thread Enrico Stura

Pius,

The situation you describe is an off-equilibrium situation. You have  
applied  a perturbation

and that may not be reversible!

Enrico.


On Wed, 08 Feb 2012 16:35:56 +0100, Pius Padayatti ppadaya...@gmail.com  
wrote:



Hi Enricho,
The scenario of streak seeding follows Ostwald ripening but will
this happen in other situations as follows

But in a special case where you have some crystals that appear as large
rods which dissolved when taken out of the incubator (or) during the
observation( these were antibody-complex crystals which were grown in
bicelles(DMPC:CHAPSO
and detergent mixtures and cholestrol, conditions citric acid pH 4.5,
with 2.4 M ammonium sulfate).
The crystals re-apparered in a day over noght incuabtion as heavy
showers of needles with heavy precipitate around.

Very hard to reproduce the conditions.
Still trying to work around these conditions.

Would like to know your thoughts if this is against the laws small
crystals to large crystals (energetically
favoured) conditions.

Also any suggestions welcome for improvements.

Pius



The answer to your question is very simple.  Small crystals will  
dissolve

when the degree of saturation
of the solution becomes too low to support their relatively high  
surface to

volume ratio.
The larger crystals will still continue to grow because of their higher
surface/volume ratio but will do so slowly.
I have achieved the dissolving of small crystals in favour of large ones
only once with 10 µl drops.
While it is difficult to achieve this with spontaneously nucleated  
crystals,

with seeding thing are very different.
This phenomenon is an every day observation if you use streak seeding on
drops that have been
equilibrated for different amount of time against different  
concentrations

of precipitant and you can
also add an additional variable by using different ratios of protein to
precipitant in the drop.
The goal is to seed at a low degree of superstauration. The small seeds  
will

be visible along the streak
immediately after seeding. When you look later on you will see only the
bigger crystals.
Streak seeding is great if you want to play this game.

Enrico.


On Wed, 08 Feb 2012 12:08:23 +0100, Theresa H. Hsu  
theresah...@live.com

wrote:

A little off from the original question. Why don't small crystals  
dissolve
to make a bigger crystal, especially when the small ones grow on top  
of each
other? Can the clustered 3D crystals (I think it is called macroscopic  
twin)

be used for full data collection?

Again, thank you.

Theresa




--
Enrico A. Stura D.Phil. (Oxon) ,Tel: 33 (0)1 69 08 4302 Office
Room 19, Bat.152,   Tel: 33 (0)1 69 08 9449Lab
LTMB, SIMOPRO, IBiTec-S, CE Saclay, 91191 Gif-sur-Yvette,   FRANCE
http://www-dsv.cea.fr/en/institutes/institute-of-biology-and-technology-saclay-ibitec-s/unites-de-recherche/department-of-molecular-engineering-of-proteins-simopro/molecular-toxinology-and-biotechnology-laboratory-ltmb/crystallogenesis-e.-stura
http://www.chem.gla.ac.uk/protein/mirror/stura/index2.html
e-mail: est...@cea.fr Fax: 33 (0)1 69 08 90  
71







--
Enrico A. Stura D.Phil. (Oxon) ,Tel: 33 (0)1 69 08 4302 Office
Room 19, Bat.152,   Tel: 33 (0)1 69 08 9449Lab
LTMB, SIMOPRO, IBiTec-S, CE Saclay, 91191 Gif-sur-Yvette,   FRANCE
http://www-dsv.cea.fr/en/institutes/institute-of-biology-and-technology-saclay-ibitec-s/unites-de-recherche/department-of-molecular-engineering-of-proteins-simopro/molecular-toxinology-and-biotechnology-laboratory-ltmb/crystallogenesis-e.-stura
http://www.chem.gla.ac.uk/protein/mirror/stura/index2.html
e-mail: est...@cea.fr Fax: 33 (0)1 69 08 90 71