Re: [ccp4bb] Software for Drawing Protein Secondary Structure
You can try TOPS. http://www.tops.leeds.ac.uk/ Best, Nian On Fri, Aug 22, 2008 at 8:57 AM, Buz Barstow [EMAIL PROTECTED] wrote: Dear All, Does anyone know of a program that is capable of drawing the secondary structure of a protein molecule? I'd really like to be able to take a protein molecule, and draw the secondary structure out along a line, indicating the positions of secondary structural elements like sheets and helices. Thanks! and all the best, --Buz
Re: [ccp4bb] Software for Drawing Protein Secondary Structure
I think the procheck output contains such a graph, too, even though it may more informative rather than pretty design. Tim -- Tim Gruene Institut fuer anorganische Chemie Tammannstr. 4 D-37077 Goettingen GPG Key ID = A46BEE1A On Fri, 22 Aug 2008, Buz Barstow wrote: Dear All, Does anyone know of a program that is capable of drawing the secondary structure of a protein molecule? I'd really like to be able to take a protein molecule, and draw the secondary structure out along a line, indicating the positions of secondary structural elements like sheets and helices. Thanks! and all the best, --Buz
Re: [ccp4bb] Software for Drawing Protein Secondary Structure
Try stride.. http://webclu.bio.wzw.tum.de/cgi-bin/stride/stridecgi.py --- On Fri, 22/8/08, Buz Barstow [EMAIL PROTECTED] wrote: From: Buz Barstow [EMAIL PROTECTED] Subject: [ccp4bb] Software for Drawing Protein Secondary Structure To: CCP4BB@JISCMAIL.AC.UK Date: Friday, 22 August, 2008, 2:57 PM Dear All, Does anyone know of a program that is capable of drawing the secondary structure of a protein molecule? I'd really like to be able to take a protein molecule, and draw the secondary structure out along a line, indicating the positions of secondary structural elements like sheets and helices. Thanks! and all the best, --Buz Send instant messages to your online friends http://uk.messenger.yahoo.com
Re: [ccp4bb] Software for Drawing Protein Secondary Structure
try espript or its online equivalent. I've always found it very good. http://espript.ibcp.fr/ESPript/ESPript/ best regards, Paul.. ### Dr. Paul A. McEwan Protein Crystallography Group Office C58 Centre for Biomolecular Science University of Nottingham Nottingham NG7 2RD UK Tel: 0115 8468924 http://www.nottingham.ac.uk/pharmacy/research/medicinal-chemistry-structural-biology/structbio.php### From: CCP4 bulletin board on behalf of hugh morganSent: Fri 22/08/2008 3:00 PMTo: CCP4BB@JISCMAIL.AC.UKSubject: Re: [ccp4bb] Software for Drawing Protein Secondary Structure Try stride..http://webclu.bio.wzw.tum.de/cgi-bin/stride/stridecgi.py--- On Fri, 22/8/08, Buz Barstow [EMAIL PROTECTED] wrote: From: Buz Barstow [EMAIL PROTECTED]Subject: [ccp4bb] Software for Drawing Protein Secondary StructureTo: CCP4BB@JISCMAIL.AC.UKDate: Friday, 22 August, 2008, 2:57 PMDear All,Does anyone know of a program that is capable of drawing the secondary structure of a protein molecule?I'd really like to be able to take a protein molecule, and draw the secondary structure out along a line, indicating the positions of secondary structural elements like sheets and helices.Thanks! and all the best,--BuzSend instant messages to your online friends http://uk.messenger.yahoo.com This message has been checked for viruses but the contents of an attachment may still contain software viruses, which could damage your computer system: you are advised to perform your own checks. Email communications with the University of Nottingham may be monitored as permitted by UK legislation.
