Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-06-03 Thread Amanda French
Microsoft Academic Search leans heavily toward scholarly publications in 
Computer Science, FYI. Great for that topic, though.


Amanda L. French, Ph.D.
Director, Digital Research Services
University Libraries, Virginia Tech
Phone: (540) 231-1108
Jabber: alfre...@im.vt.edu
Twitter: @amandafrench
Skype: amandafrenchphd

On 5/21/15 9:27 AM, Alex Armstrong wrote:

Thanks for the responses; keep them coming, if you have other ideas.

It's hard to demarcate domains, but my userbase consists largely of 
librarians and liberal arts faculty.


I wasn't at all aware of Microsoft Academic Search. Their content 
looks thorough, though it doesn' include books:

http://academic.research.microsoft.com/About/Help.htm#5

snip


Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-25 Thread Jason Stirnaman
Thanks for catching that. I haven't done much testing yet. Send a pull request?
Jason

On May 24, 2015 10:59 PM, Wataru Ono ono.wataru.p...@gmail.com wrote:
Hi,
Thank you for your kind advice
using jQuery with the ORCID Public API to fetch publications for specific IDs:
https://github.com/jstirnaman/Orcid-Profiles-jQuery-Widget

In the case of ['work-external-identifiers'] is null, It is an error!
81 line:  var extids =
value['work-external-identifiers']['work-external-identifier'];
_
 小野 亘 (Ono, Wataru)
 E-Mail: ono.wataru.p...@gmail.com
 (業務用: onow...@u-gakugei.ac.jp)
   @wonox  http://orcid.org/-0002-6398-9317
 東京学芸大学附属図書館(教育研究支援部学術情報課)
 Tel: 042-329-7217 Fax: 042-323-5994


2015-05-20 23:16 GMT+09:00 Jason Stirnaman jstirna...@kumc.edu:
 Hi again.
 Here are some examples implementing the ORCID API:

 using jQuery with the ORCID Public API to fetch publications for specific IDs:
 https://github.com/jstirnaman/Orcid-Profiles-jQuery-Widget

 a Ruby client for Public and Member:
 https://github.com/jstirnaman/BibApp/blob/kumc/lib/orcid_client.rb

 Jason

 Jason Stirnaman, MLS
 Application Development, Library and Information Services, IR
 University of Kansas Medical Center
 jstirna...@kumc.edu
 913-588-7319

 On May 20, 2015, at 9:06 AM, Jason Stirnaman jstirna...@kumc.edu wrote:

 Hi, Alex.
 re: ORCID, available author info  depends on what Bio information the ID 
 owner makes publicly visible. See the READ section at 
 https://members.orcid.org/api/api-calls

 I was about to send some old Ruby code for searching NLM Eutils (PubMed) 
 until I saw your last message.

 If you want to manage a local bibliography, then try Zotero and their API: 
 https://www.zotero.org/support/dev/web_api/v3/start


 Jason

 Jason Stirnaman, MLS
 Application Development, Library and Information Services, IR
 University of Kansas Medical Center
 jstirna...@kumc.edu
 913-588-7319

 On May 20, 2015, at 5:59 AM, Alex Armstrong alehand...@gmail.com wrote:

 Hi list,

 What are some good API options for retrieving a list of scholarly 
 publications by author?

 I would like to be able to grab them and display them on a website along 
 with other information about each author.

 Google Scholar does not have a public API as far as I can tell.

 CrossRef metadata search does not allow to search by author.

 Orcid seems promising. I would have to ask the users I have in mind to add 
 or import their publications to Orcid, as most of them are not on there 
 already. That's doable, but I'm not sure if I'll be able to do what I 
 described above with their public (as opposed to their member) API.

 Any other ideas or thoughts?

 Best,
 Alex Armstrong



Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-24 Thread Wataru Ono
Hi,
Thank you for your kind advice
using jQuery with the ORCID Public API to fetch publications for specific IDs:
https://github.com/jstirnaman/Orcid-Profiles-jQuery-Widget

In the case of ['work-external-identifiers'] is null, It is an error!
81 line:  var extids =
value['work-external-identifiers']['work-external-identifier'];
_
 小野 亘 (Ono, Wataru)
 E-Mail: ono.wataru.p...@gmail.com
 (業務用: onow...@u-gakugei.ac.jp)
   @wonox  http://orcid.org/-0002-6398-9317
 東京学芸大学附属図書館(教育研究支援部学術情報課)
 Tel: 042-329-7217 Fax: 042-323-5994


2015-05-20 23:16 GMT+09:00 Jason Stirnaman jstirna...@kumc.edu:
 Hi again.
 Here are some examples implementing the ORCID API:

 using jQuery with the ORCID Public API to fetch publications for specific IDs:
 https://github.com/jstirnaman/Orcid-Profiles-jQuery-Widget

 a Ruby client for Public and Member:
 https://github.com/jstirnaman/BibApp/blob/kumc/lib/orcid_client.rb

 Jason

 Jason Stirnaman, MLS
 Application Development, Library and Information Services, IR
 University of Kansas Medical Center
 jstirna...@kumc.edu
 913-588-7319

 On May 20, 2015, at 9:06 AM, Jason Stirnaman jstirna...@kumc.edu wrote:

 Hi, Alex.
 re: ORCID, available author info  depends on what Bio information the ID 
 owner makes publicly visible. See the READ section at 
 https://members.orcid.org/api/api-calls

 I was about to send some old Ruby code for searching NLM Eutils (PubMed) 
 until I saw your last message.

 If you want to manage a local bibliography, then try Zotero and their API: 
 https://www.zotero.org/support/dev/web_api/v3/start


 Jason

 Jason Stirnaman, MLS
 Application Development, Library and Information Services, IR
 University of Kansas Medical Center
 jstirna...@kumc.edu
 913-588-7319

 On May 20, 2015, at 5:59 AM, Alex Armstrong alehand...@gmail.com wrote:

 Hi list,

 What are some good API options for retrieving a list of scholarly 
 publications by author?

 I would like to be able to grab them and display them on a website along 
 with other information about each author.

 Google Scholar does not have a public API as far as I can tell.

 CrossRef metadata search does not allow to search by author.

 Orcid seems promising. I would have to ask the users I have in mind to add 
 or import their publications to Orcid, as most of them are not on there 
 already. That's doable, but I'm not sure if I'll be able to do what I 
 described above with their public (as opposed to their member) API.

 Any other ideas or thoughts?

 Best,
 Alex Armstrong



Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-23 Thread Alex Armstrong
Christina, it sounds like Thomson Reuters really has their stuff working 
well together. This is for a consortial project; so access to Web of 
Science varies. Thanks for bringing it up. I was looking for a 
one-size-fits-all solution, but we may end up using various strategies 
to populate our main source (whether it's ORCID or Zotero or something 
else).


Alex


On 05/23/2015 12:34 AM, Pikas, Christina K. wrote:

FWIW, if you have WoS (and I've lost track of whether you mentioned that), you 
can batch load your faculty into ResearcherID and then have TR submit to ORCID. 
The faculty would be the account owners but you would be the delegate. You 
could add citations and otherwise manage the accounts. It probably depends on 
your local culture whether this would be an acceptable approach.

Also, if you do have WoS and the faculty use EndNote, it's quite easy to move 
things into ResearcherID from there.

Not an endorsement by any means!

Christina

-Original Message-
From: Code for Libraries [mailto:CODE4LIB@listserv.nd.edu] On Behalf Of Alex 
Armstrong
Sent: Friday, May 22, 2015 4:47 PM
To: CODE4LIB@listserv.nd.edu
Subject: Re: [CODE4LIB] API to retrieve scholarly publications by author

Hi Dan,

Thanks for taking the time to share this. On closer inspection it looks like 
Academic Search is a research project rather than a product; one that has 
stalled, concluded or been abandoned.

I was just looking at what sources ImpactStory indexes. For scholarly 
publications they seem to pull data from ORCID as well as Google Scholar. 
They're probably scraping the latter, but only if you designate a Google 
Scholar ID. They don't try to disentangle authors themselves, which is probably 
wise. (I'm basing this on their sample profile and some light googling.)

I think I'll probably go with one of Zotero, Mendeley or ORCID for my project. 
I think ORCID might provide more benefits to my users outside of my particular 
project. That makes it appealing since I'll have to convince people to go and 
add the data themselves.

I wish it supported arbitrary tags for works, which would allow users to tag a 
few representative items.

Alex



On 05/22/2015 10:32 PM, Dan Scott wrote:

Hi Alex:

On Thu, 21 May 2015 at 09:28 Alex Armstrong alehand...@gmail.com wrote:


Thanks for the responses; keep them coming, if you have other ideas.

It's hard to demarcate domains, but my userbase consists largely of
librarians and liberal arts faculty.

I wasn't at all aware of Microsoft Academic Search. Their content
looks thorough, though it doesn' include books:
http://academic.research.microsoft.com/About/Help.htm#5

But based on the few searches I tried, it looks to be horrible at
de-duping.


I found it funny that the following article came up in Google Now
about an hour after I posted my previous response on the 20th:
http://blogs.nature.com/news/2014/05/the-decline-and-fall-of-microsoft
-academic-search.html



Dan, can you use ORCID IDs with Zotero? (Though that might create
another hoop to jump through.)


Zotero is open source, so you can theoretically do anything, but out
of the box it doesn't do anything with ORCIDs. I'm just planning on
integrating them (when possible) into the relational database after
the RIS-to-SQL conversion as part of a set of cleanup / deduplication steps.


Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-22 Thread Pikas, Christina K.
FWIW, if you have WoS (and I've lost track of whether you mentioned that), you 
can batch load your faculty into ResearcherID and then have TR submit to ORCID. 
The faculty would be the account owners but you would be the delegate. You 
could add citations and otherwise manage the accounts. It probably depends on 
your local culture whether this would be an acceptable approach.

Also, if you do have WoS and the faculty use EndNote, it's quite easy to move 
things into ResearcherID from there.

Not an endorsement by any means!

Christina

-Original Message-
From: Code for Libraries [mailto:CODE4LIB@listserv.nd.edu] On Behalf Of Alex 
Armstrong
Sent: Friday, May 22, 2015 4:47 PM
To: CODE4LIB@listserv.nd.edu
Subject: Re: [CODE4LIB] API to retrieve scholarly publications by author

Hi Dan,

Thanks for taking the time to share this. On closer inspection it looks like 
Academic Search is a research project rather than a product; one that has 
stalled, concluded or been abandoned.

I was just looking at what sources ImpactStory indexes. For scholarly 
publications they seem to pull data from ORCID as well as Google Scholar. 
They're probably scraping the latter, but only if you designate a Google 
Scholar ID. They don't try to disentangle authors themselves, which is probably 
wise. (I'm basing this on their sample profile and some light googling.)

I think I'll probably go with one of Zotero, Mendeley or ORCID for my project. 
I think ORCID might provide more benefits to my users outside of my particular 
project. That makes it appealing since I'll have to convince people to go and 
add the data themselves.

I wish it supported arbitrary tags for works, which would allow users to tag a 
few representative items.

Alex



On 05/22/2015 10:32 PM, Dan Scott wrote:
 Hi Alex:

 On Thu, 21 May 2015 at 09:28 Alex Armstrong alehand...@gmail.com wrote:

 Thanks for the responses; keep them coming, if you have other ideas.

 It's hard to demarcate domains, but my userbase consists largely of 
 librarians and liberal arts faculty.

 I wasn't at all aware of Microsoft Academic Search. Their content 
 looks thorough, though it doesn' include books:
 http://academic.research.microsoft.com/About/Help.htm#5

 But based on the few searches I tried, it looks to be horrible at 
 de-duping.

 I found it funny that the following article came up in Google Now 
 about an hour after I posted my previous response on the 20th:
 http://blogs.nature.com/news/2014/05/the-decline-and-fall-of-microsoft
 -academic-search.html


 Dan, can you use ORCID IDs with Zotero? (Though that might create 
 another hoop to jump through.)

 Zotero is open source, so you can theoretically do anything, but out 
 of the box it doesn't do anything with ORCIDs. I'm just planning on 
 integrating them (when possible) into the relational database after 
 the RIS-to-SQL conversion as part of a set of cleanup / deduplication steps.


Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-22 Thread Alex Armstrong

Hi Dan,

Thanks for taking the time to share this. On closer inspection it looks 
like Academic Search is a research project rather than a product; one 
that has stalled, concluded or been abandoned.


I was just looking at what sources ImpactStory indexes. For scholarly 
publications they seem to pull data from ORCID as well as Google 
Scholar. They're probably scraping the latter, but only if you designate 
a Google Scholar ID. They don't try to disentangle authors themselves, 
which is probably wise. (I'm basing this on their sample profile and 
some light googling.)


I think I'll probably go with one of Zotero, Mendeley or ORCID for my 
project. I think ORCID might provide more benefits to my users outside 
of my particular project. That makes it appealing since I'll have to 
convince people to go and add the data themselves.


I wish it supported arbitrary tags for works, which would allow users to 
tag a few representative items.


Alex



On 05/22/2015 10:32 PM, Dan Scott wrote:

Hi Alex:

On Thu, 21 May 2015 at 09:28 Alex Armstrong alehand...@gmail.com wrote:


Thanks for the responses; keep them coming, if you have other ideas.

It's hard to demarcate domains, but my userbase consists largely of
librarians and liberal arts faculty.

I wasn't at all aware of Microsoft Academic Search. Their content looks
thorough, though it doesn' include books:
http://academic.research.microsoft.com/About/Help.htm#5

But based on the few searches I tried, it looks to be horrible at
de-duping.


I found it funny that the following article came up in Google Now about an
hour after I posted my previous response on the 20th:
http://blogs.nature.com/news/2014/05/the-decline-and-fall-of-microsoft-academic-search.html



Dan, can you use ORCID IDs with Zotero? (Though that might create
another hoop to jump through.)


Zotero is open source, so you can theoretically do anything, but out of the
box it doesn't do anything with ORCIDs. I'm just planning on integrating
them (when possible) into the relational database after the RIS-to-SQL
conversion as part of a set of cleanup / deduplication steps.


Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-22 Thread Dan Scott
Hi Alex:

On Thu, 21 May 2015 at 09:28 Alex Armstrong alehand...@gmail.com wrote:

 Thanks for the responses; keep them coming, if you have other ideas.

 It's hard to demarcate domains, but my userbase consists largely of
 librarians and liberal arts faculty.

 I wasn't at all aware of Microsoft Academic Search. Their content looks
 thorough, though it doesn' include books:
 http://academic.research.microsoft.com/About/Help.htm#5

 But based on the few searches I tried, it looks to be horrible at
 de-duping.


I found it funny that the following article came up in Google Now about an
hour after I posted my previous response on the 20th:
http://blogs.nature.com/news/2014/05/the-decline-and-fall-of-microsoft-academic-search.html


 Dan, can you use ORCID IDs with Zotero? (Though that might create
 another hoop to jump through.)


Zotero is open source, so you can theoretically do anything, but out of the
box it doesn't do anything with ORCIDs. I'm just planning on integrating
them (when possible) into the relational database after the RIS-to-SQL
conversion as part of a set of cleanup / deduplication steps.


Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-21 Thread Alex Armstrong

Thanks for the responses; keep them coming, if you have other ideas.

It's hard to demarcate domains, but my userbase consists largely of 
librarians and liberal arts faculty.


I wasn't at all aware of Microsoft Academic Search. Their content looks 
thorough, though it doesn' include books:

http://academic.research.microsoft.com/About/Help.htm#5

But based on the few searches I tried, it looks to be horrible at de-duping.

I like the idea of using Zotero or Mendeley but that would put the 
burden of managing the data on me.


My hope was either to find some reasonable data ready-made (MS Academic 
Search shows promise)  or to relegate that to my users by making the 
process useful in other ways (ORCID).


Dan, can you use ORCID IDs with Zotero? (Though that might create 
another hoop to jump through.)


Another tack in my case might be to aim for an indicative, rather an 
exhaustive, list of works. That would require more human brain than API, 
but would decrease the size of the data.


Alex



On 05/21/2015 12:23 AM, Dan Scott wrote:

Good timing for this discussion!

On Wed, 20 May 2015 at 17:03 Laura Robbins pope...@gmail.com wrote:


If you're looking to compile your own data, Zotero is a great way to
do it and provides an API.  I recently moved our faculty publications
database into it.


We're embarking on a self-compilation exercise and are going the Zotero
route as well, relying on the power of student labour to take the
bibliography section of each faculty member's CV and add them to Zotero
group libraries.

I'm cobbling together a super-simple Flask-on-PostgreSQL web app that will
take the Zotero export as RIS, migrate it into a relational database, and
enable us to clean up / enrich the data from there (
https://github.com/dbs/ris2web if you want to peek at it's very early, very
much in progress state).

One thing I've learned is that I reay wish is that Zotero offered
linked data authority control, so that I could assert that  this Smith,
Jane is either different or the same as that Smith, Jane at the time of
creating or editing the bibliography entry, but for now we're going to do
the deduping  URI addition after the fact. The URIs will be exposed as
RDFa in the HTML of course.



If you're looking to compile data, though I hate to suggest it, is
there an API for google scholar?  It's not a perfect resource, but for
humanities and social sciences, I've found some publications for our
faculty that they hadn't given me themselves.


There is no API for Google Scholar, alas. There is an API for Microsoft
Academic Search at http://academic.research.microsoft.com/About/Help.htm#4
which might be of interest. Haven't tried it myself.

The Mendeley API looks quite interesting as well. Wasn't aware of that,
even--thanks Bee!


Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-20 Thread Pikas, Christina K.
The Scopus API: http://dev.elsevier.com/sc_apis.html


-Original Message-
From: Code for Libraries [mailto:CODE4LIB@listserv.nd.edu] On Behalf Of Alex 
Armstrong
Sent: Wednesday, May 20, 2015 6:59 AM
To: CODE4LIB@listserv.nd.edu
Subject: [CODE4LIB] API to retrieve scholarly publications by author

Hi list,

What are some good API options for retrieving a list of scholarly publications 
by author?

I would like to be able to grab them and display them on a website along with 
other information about each author.

Google Scholar does not have a public API as far as I can tell.

CrossRef metadata search does not allow to search by author.

Orcid seems promising. I would have to ask the users I have in mind to add or 
import their publications to Orcid, as most of them are not on there already. 
That's doable, but I'm not sure if I'll be able to do what I described above 
with their public (as opposed to their member) API.

Any other ideas or thoughts?

Best,
Alex Armstrong


Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-20 Thread Jason Bengtson
The National Library of Medicine has some great apis for use with PubMed
and their other databases. That's only health science, but it's a good
start. http://www.nlm.nih.gov/api/

Best regards,
*Jason Bengtson, MLIS, MA*
Innovation Architect


*Houston Academy of MedicineThe Texas Medical Center Library*
1133 John Freeman Blvd
Houston, TX   77030
http://library.tmc.edu/
www.jasonbengtson.com

On Wed, May 20, 2015 at 6:22 AM, Pikas, Christina K. 
christina.pi...@jhuapl.edu wrote:

 The Scopus API: http://dev.elsevier.com/sc_apis.html


 -Original Message-
 From: Code for Libraries [mailto:CODE4LIB@listserv.nd.edu] On Behalf Of
 Alex Armstrong
 Sent: Wednesday, May 20, 2015 6:59 AM
 To: CODE4LIB@listserv.nd.edu
 Subject: [CODE4LIB] API to retrieve scholarly publications by author

 Hi list,

 What are some good API options for retrieving a list of scholarly
 publications by author?

 I would like to be able to grab them and display them on a website along
 with other information about each author.

 Google Scholar does not have a public API as far as I can tell.

 CrossRef metadata search does not allow to search by author.

 Orcid seems promising. I would have to ask the users I have in mind to add
 or import their publications to Orcid, as most of them are not on there
 already. That's doable, but I'm not sure if I'll be able to do what I
 described above with their public (as opposed to their member) API.

 Any other ideas or thoughts?

 Best,
 Alex Armstrong



Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-20 Thread Christine Mayo
I've been doing a lot of work lately with EuropePMC's API -
http://europepmc.org/RestfulWebService
It's been super useful for my purposes, though I've been searching based on
article DOIs, not on authors. You might need to do a bit more parsing of
the results to make sure you don't have false hits with author names.

-Christine Mayo

On Wed, May 20, 2015 at 8:24 AM, Jason Bengtson j.bengtson...@gmail.com
wrote:

 The National Library of Medicine has some great apis for use with PubMed
 and their other databases. That's only health science, but it's a good
 start. http://www.nlm.nih.gov/api/

 Best regards,
 *Jason Bengtson, MLIS, MA*
 Innovation Architect


 *Houston Academy of MedicineThe Texas Medical Center Library*
 1133 John Freeman Blvd
 Houston, TX   77030
 http://library.tmc.edu/
 www.jasonbengtson.com

 On Wed, May 20, 2015 at 6:22 AM, Pikas, Christina K. 
 christina.pi...@jhuapl.edu wrote:

  The Scopus API: http://dev.elsevier.com/sc_apis.html
 
 
  -Original Message-
  From: Code for Libraries [mailto:CODE4LIB@listserv.nd.edu] On Behalf Of
  Alex Armstrong
  Sent: Wednesday, May 20, 2015 6:59 AM
  To: CODE4LIB@listserv.nd.edu
  Subject: [CODE4LIB] API to retrieve scholarly publications by author
 
  Hi list,
 
  What are some good API options for retrieving a list of scholarly
  publications by author?
 
  I would like to be able to grab them and display them on a website along
  with other information about each author.
 
  Google Scholar does not have a public API as far as I can tell.
 
  CrossRef metadata search does not allow to search by author.
 
  Orcid seems promising. I would have to ask the users I have in mind to
 add
  or import their publications to Orcid, as most of them are not on there
  already. That's doable, but I'm not sure if I'll be able to do what I
  described above with their public (as opposed to their member) API.
 
  Any other ideas or thoughts?
 
  Best,
  Alex Armstrong
 



Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-20 Thread Heller, Margaret
I've used the arXiv API for a similar purpose: http://arxiv.org/help/api/index. 

Margaret Heller
Digital Services Librarian
Loyola University Chicago
773-508-2686

-Original Message-
From: Code for Libraries [mailto:CODE4LIB@LISTSERV.ND.EDU] On Behalf Of Pikas, 
Christina K.
Sent: Wednesday, May 20, 2015 6:22 AM
To: CODE4LIB@LISTSERV.ND.EDU
Subject: Re: [CODE4LIB] API to retrieve scholarly publications by author

The Scopus API: http://dev.elsevier.com/sc_apis.html


-Original Message-
From: Code for Libraries [mailto:CODE4LIB@listserv.nd.edu] On Behalf Of Alex 
Armstrong
Sent: Wednesday, May 20, 2015 6:59 AM
To: CODE4LIB@listserv.nd.edu
Subject: [CODE4LIB] API to retrieve scholarly publications by author

Hi list,

What are some good API options for retrieving a list of scholarly publications 
by author?

I would like to be able to grab them and display them on a website along with 
other information about each author.

Google Scholar does not have a public API as far as I can tell.

CrossRef metadata search does not allow to search by author.

Orcid seems promising. I would have to ask the users I have in mind to add or 
import their publications to Orcid, as most of them are not on there already. 
That's doable, but I'm not sure if I'll be able to do what I described above 
with their public (as opposed to their member) API.

Any other ideas or thoughts?

Best,
Alex Armstrong


Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-20 Thread Alex Armstrong

Thanks for the responses so far.

One thing that I forgot to mention is that the authors I'm going to be 
needing data for are faculty, librarians and technologists at liberal 
arts universities. So there's not a whole lot of medicine; which is 
unfortunate as they seem to have robust APIs in place.


Alex


On 05/20/2015 04:38 PM, Christine Mayo wrote:

I've been doing a lot of work lately with EuropePMC's API -
http://europepmc.org/RestfulWebService
It's been super useful for my purposes, though I've been searching based on
article DOIs, not on authors. You might need to do a bit more parsing of
the results to make sure you don't have false hits with author names.

-Christine Mayo

On Wed, May 20, 2015 at 8:24 AM, Jason Bengtsonj.bengtson...@gmail.com
wrote:


The National Library of Medicine has some great apis for use with PubMed
and their other databases. That's only health science, but it's a good
start.http://www.nlm.nih.gov/api/

Best regards,
*Jason Bengtson, MLIS, MA*
Innovation Architect


*Houston Academy of MedicineThe Texas Medical Center Library*
1133 John Freeman Blvd
Houston, TX   77030
http://library.tmc.edu/
www.jasonbengtson.com

On Wed, May 20, 2015 at 6:22 AM, Pikas, Christina K. 
christina.pi...@jhuapl.edu wrote:


The Scopus API:http://dev.elsevier.com/sc_apis.html


-Original Message-
From: Code for Libraries [mailto:CODE4LIB@listserv.nd.edu] On Behalf Of
Alex Armstrong
Sent: Wednesday, May 20, 2015 6:59 AM
To:CODE4LIB@listserv.nd.edu
Subject: [CODE4LIB] API to retrieve scholarly publications by author

Hi list,

What are some good API options for retrieving a list of scholarly
publications by author?

I would like to be able to grab them and display them on a website along
with other information about each author.

Google Scholar does not have a public API as far as I can tell.

CrossRef metadata search does not allow to search by author.

Orcid seems promising. I would have to ask the users I have in mind to

add

or import their publications to Orcid, as most of them are not on there
already. That's doable, but I'm not sure if I'll be able to do what I
described above with their public (as opposed to their member) API.

Any other ideas or thoughts?

Best,
Alex Armstrong



Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-20 Thread Jason Stirnaman
Hi, Alex. 
re: ORCID, available author info  depends on what Bio information the ID owner 
makes publicly visible. See the READ section at 
https://members.orcid.org/api/api-calls

I was about to send some old Ruby code for searching NLM Eutils (PubMed) until 
I saw your last message.

If you want to manage a local bibliography, then try Zotero and their API: 
https://www.zotero.org/support/dev/web_api/v3/start


Jason

Jason Stirnaman, MLS
Application Development, Library and Information Services, IR
University of Kansas Medical Center
jstirna...@kumc.edu
913-588-7319

On May 20, 2015, at 5:59 AM, Alex Armstrong alehand...@gmail.com wrote:

 Hi list,
 
 What are some good API options for retrieving a list of scholarly 
 publications by author?
 
 I would like to be able to grab them and display them on a website along with 
 other information about each author.
 
 Google Scholar does not have a public API as far as I can tell.
 
 CrossRef metadata search does not allow to search by author.
 
 Orcid seems promising. I would have to ask the users I have in mind to add or 
 import their publications to Orcid, as most of them are not on there already. 
 That's doable, but I'm not sure if I'll be able to do what I described above 
 with their public (as opposed to their member) API.
 
 Any other ideas or thoughts?
 
 Best,
 Alex Armstrong


Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-20 Thread Jason Stirnaman
Hi again.
Here are some examples implementing the ORCID API:

using jQuery with the ORCID Public API to fetch publications for specific IDs:
https://github.com/jstirnaman/Orcid-Profiles-jQuery-Widget

a Ruby client for Public and Member:
https://github.com/jstirnaman/BibApp/blob/kumc/lib/orcid_client.rb

Jason

Jason Stirnaman, MLS
Application Development, Library and Information Services, IR
University of Kansas Medical Center
jstirna...@kumc.edu
913-588-7319

On May 20, 2015, at 9:06 AM, Jason Stirnaman jstirna...@kumc.edu wrote:

 Hi, Alex. 
 re: ORCID, available author info  depends on what Bio information the ID 
 owner makes publicly visible. See the READ section at 
 https://members.orcid.org/api/api-calls
 
 I was about to send some old Ruby code for searching NLM Eutils (PubMed) 
 until I saw your last message.
 
 If you want to manage a local bibliography, then try Zotero and their API: 
 https://www.zotero.org/support/dev/web_api/v3/start
 
 
 Jason
 
 Jason Stirnaman, MLS
 Application Development, Library and Information Services, IR
 University of Kansas Medical Center
 jstirna...@kumc.edu
 913-588-7319
 
 On May 20, 2015, at 5:59 AM, Alex Armstrong alehand...@gmail.com wrote:
 
 Hi list,
 
 What are some good API options for retrieving a list of scholarly 
 publications by author?
 
 I would like to be able to grab them and display them on a website along 
 with other information about each author.
 
 Google Scholar does not have a public API as far as I can tell.
 
 CrossRef metadata search does not allow to search by author.
 
 Orcid seems promising. I would have to ask the users I have in mind to add 
 or import their publications to Orcid, as most of them are not on there 
 already. That's doable, but I'm not sure if I'll be able to do what I 
 described above with their public (as opposed to their member) API.
 
 Any other ideas or thoughts?
 
 Best,
 Alex Armstrong
 


Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-20 Thread Bornheimer, Bee
Possibly the Mendeley API? 
http://dev.mendeley.com/getting_started/common_tasks.html

It might also make a difference to know the domain in which these authors 
publish. Scopus indexes primarily scientific, technical, medical content. 

-Original Message-
From: Code for Libraries [mailto:CODE4LIB@LISTSERV.ND.EDU] On Behalf Of Heller, 
Margaret
Sent: Wednesday, May 20, 2015 7:27 AM
To: CODE4LIB@LISTSERV.ND.EDU
Subject: Re: [CODE4LIB] API to retrieve scholarly publications by author

I've used the arXiv API for a similar purpose: http://arxiv.org/help/api/index. 

Margaret Heller
Digital Services Librarian
Loyola University Chicago
773-508-2686

-Original Message-
From: Code for Libraries [mailto:CODE4LIB@LISTSERV.ND.EDU] On Behalf Of Pikas, 
Christina K.
Sent: Wednesday, May 20, 2015 6:22 AM
To: CODE4LIB@LISTSERV.ND.EDU
Subject: Re: [CODE4LIB] API to retrieve scholarly publications by author

The Scopus API: http://dev.elsevier.com/sc_apis.html


-Original Message-
From: Code for Libraries [mailto:CODE4LIB@listserv.nd.edu] On Behalf Of Alex 
Armstrong
Sent: Wednesday, May 20, 2015 6:59 AM
To: CODE4LIB@listserv.nd.edu
Subject: [CODE4LIB] API to retrieve scholarly publications by author

Hi list,

What are some good API options for retrieving a list of scholarly publications 
by author?

I would like to be able to grab them and display them on a website along with 
other information about each author.

Google Scholar does not have a public API as far as I can tell.

CrossRef metadata search does not allow to search by author.

Orcid seems promising. I would have to ask the users I have in mind to add or 
import their publications to Orcid, as most of them are not on there already. 
That's doable, but I'm not sure if I'll be able to do what I described above 
with their public (as opposed to their member) API.

Any other ideas or thoughts?

Best,
Alex Armstrong


Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-20 Thread Laura Robbins
If you're looking to compile your own data, Zotero is a great way to
do it and provides an API.  I recently moved our faculty publications
database into it.

If you're looking to compile data, though I hate to suggest it, is
there an API for google scholar?  It's not a perfect resource, but for
humanities and social sciences, I've found some publications for our
faculty that they hadn't given me themselves.

Laura Pope Robbins
Professor/Reference Librarian
Dowling College


 On May 20, 2015, at 11:33 AM, Bornheimer, Bee eborn...@qualcomm.com wrote:

 Possibly the Mendeley API? 
 http://dev.mendeley.com/getting_started/common_tasks.html

 It might also make a difference to know the domain in which these authors 
 publish. Scopus indexes primarily scientific, technical, medical content.

 -Original Message-
 From: Code for Libraries [mailto:CODE4LIB@LISTSERV.ND.EDU] On Behalf Of 
 Heller, Margaret
 Sent: Wednesday, May 20, 2015 7:27 AM
 To: CODE4LIB@LISTSERV.ND.EDU
 Subject: Re: [CODE4LIB] API to retrieve scholarly publications by author

 I've used the arXiv API for a similar purpose: 
 http://arxiv.org/help/api/index.

 Margaret Heller
 Digital Services Librarian
 Loyola University Chicago
 773-508-2686

 -Original Message-
 From: Code for Libraries [mailto:CODE4LIB@LISTSERV.ND.EDU] On Behalf Of 
 Pikas, Christina K.
 Sent: Wednesday, May 20, 2015 6:22 AM
 To: CODE4LIB@LISTSERV.ND.EDU
 Subject: Re: [CODE4LIB] API to retrieve scholarly publications by author

 The Scopus API: http://dev.elsevier.com/sc_apis.html


 -Original Message-
 From: Code for Libraries [mailto:CODE4LIB@listserv.nd.edu] On Behalf Of Alex 
 Armstrong
 Sent: Wednesday, May 20, 2015 6:59 AM
 To: CODE4LIB@listserv.nd.edu
 Subject: [CODE4LIB] API to retrieve scholarly publications by author

 Hi list,

 What are some good API options for retrieving a list of scholarly 
 publications by author?

 I would like to be able to grab them and display them on a website along with 
 other information about each author.

 Google Scholar does not have a public API as far as I can tell.

 CrossRef metadata search does not allow to search by author.

 Orcid seems promising. I would have to ask the users I have in mind to add or 
 import their publications to Orcid, as most of them are not on there already. 
 That's doable, but I'm not sure if I'll be able to do what I described above 
 with their public (as opposed to their member) API.

 Any other ideas or thoughts?

 Best,
 Alex Armstrong


Re: [CODE4LIB] API to retrieve scholarly publications by author

2015-05-20 Thread Dan Scott
Good timing for this discussion!

On Wed, 20 May 2015 at 17:03 Laura Robbins pope...@gmail.com wrote:

 If you're looking to compile your own data, Zotero is a great way to
 do it and provides an API.  I recently moved our faculty publications
 database into it.


We're embarking on a self-compilation exercise and are going the Zotero
route as well, relying on the power of student labour to take the
bibliography section of each faculty member's CV and add them to Zotero
group libraries.

I'm cobbling together a super-simple Flask-on-PostgreSQL web app that will
take the Zotero export as RIS, migrate it into a relational database, and
enable us to clean up / enrich the data from there (
https://github.com/dbs/ris2web if you want to peek at it's very early, very
much in progress state).

One thing I've learned is that I reay wish is that Zotero offered
linked data authority control, so that I could assert that  this Smith,
Jane is either different or the same as that Smith, Jane at the time of
creating or editing the bibliography entry, but for now we're going to do
the deduping  URI addition after the fact. The URIs will be exposed as
RDFa in the HTML of course.


 If you're looking to compile data, though I hate to suggest it, is
 there an API for google scholar?  It's not a perfect resource, but for
 humanities and social sciences, I've found some publications for our
 faculty that they hadn't given me themselves.


There is no API for Google Scholar, alas. There is an API for Microsoft
Academic Search at http://academic.research.microsoft.com/About/Help.htm#4
which might be of interest. Haven't tried it myself.

The Mendeley API looks quite interesting as well. Wasn't aware of that,
even--thanks Bee!