Processed: reassign 1029599 to git-buildpackage, reassign 1029553 to src:linux, tagging 1029523 ...
Processing commands for cont...@bugs.debian.org: > reassign 1029599 git-buildpackage Bug #1029599 [gbp] gbp: Permit to run merge step alone after gbp import-orig --no-merge Warning: Unknown package 'gbp' Bug reassigned from package 'gbp' to 'git-buildpackage'. No longer marked as found in versions git-buildpackage. Ignoring request to alter fixed versions of bug #1029599 to the same values previously set > reassign 1029553 src:linux 6.1.8-1 Bug #1029553 {Done: Bastian Germann } [linux-6.1.8] linux-6.1.8: new stable kernel release 6.1.8 Warning: Unknown package 'linux-6.1.8' Bug reassigned from package 'linux-6.1.8' to 'src:linux'. Ignoring request to alter found versions of bug #1029553 to the same values previously set Ignoring request to alter fixed versions of bug #1029553 to the same values previously set Bug #1029553 {Done: Bastian Germann } [src:linux] linux-6.1.8: new stable kernel release 6.1.8 The source 'linux' and version '6.1.8-1' do not appear to match any binary packages Marked as found in versions linux/6.1.8-1. > tags 1029523 + experimental Bug #1029523 {Done: Mohammed Bilal } [ruby-net-http-persistent] ruby-net-http-persistent want Ruby (~> 2.1) Added tag(s) experimental. > notfound 976470 1.0.16-1 Bug #976470 [src:reprozip] reprozip: FTBFS on arm64: native/config.h:12:9: error: #error Unrecognized architecture! No longer marked as found in versions reprozip/1.0.16-1. > notfixed 1025770 5.4.4-3 Bug #1025770 {Done: Sergei Golovan } [lua5.4] lua5.4: Provide compiled version of srlua and glue? No longer marked as fixed in versions lua5.4/5.4.4-3. > notfixed 1029582 4.1.1-2 Bug #1029582 {Done: Ricardo Mones } [claws-mail] claws-mail: Processing rules don't apply to newly-created folders No longer marked as fixed in versions claws-mail/4.1.1-2. > thanks Stopping processing here. Please contact me if you need assistance. -- 1025770: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1025770 1029523: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029523 1029553: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029553 1029582: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029582 1029599: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029599 976470: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=976470 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of bluebrain-hpc-coding-conventions_1.0.0+git20221201-1_amd64.changes
bluebrain-hpc-coding-conventions_1.0.0+git20221201-1_amd64.changes uploaded successfully to localhost along with the files: bluebrain-hpc-coding-conventions_1.0.0+git20221201-1.dsc bluebrain-hpc-coding-conventions_1.0.0+git20221201.orig.tar.gz bluebrain-hpc-coding-conventions_1.0.0+git20221201-1.debian.tar.xz bluebrain-hpc-coding-conventions_1.0.0+git20221201-1_all.deb bluebrain-hpc-coding-conventions_1.0.0+git20221201-1_amd64.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1029696: python-pweave: tests fail with scipy 1.10
Package: python-pweave Version: 0.25-4 Severity: normal scipy 1.10 is now available in experimental. python-pweave fails debci tests using it. We are considering uploading scipy 1.10 to unstable in order to included it in the forthcoming stable release. If we proceed with that, then this bug will become Severity: serious. The errors are in the LaTeX test build rather than directly from scipy. It looks like the test failure is triggered simply by the message going to stderr, which can be ignored by configuring debian/tests/control to not treat output in stderr as error (allow-stderr). The pdf file is generated. Nevertheless the error message looks real. Does the pdf file contain the correct content? A sample from the failing test log is autopkgtest [19:41:25]: test command1: set -e ; cp debian/tests/examples/FIR_* "$AUTOPKGTEST_TMP" ; cd "$AUTOPKGTEST_TMP" ; echo "Testing texw => tex => pdf:" ; pweave -f tex FIR_design_verb.texw ; pdflatex FIR_design_verb.tex ; echo "Testing rstw => rst => html:" ; pweave -f rst FIR_design.rstw ; rst2html FIR_design.rst FIR_design_rst.html ; echo "Testing mdw => html (via python-markdown):" ; pweave -f md2html FIR_design.mdw ; echo "Testing mdw => md => html (via pandoc):" ; pweave -f pandoc FIR_design.mdw ; pandoc -s --mathjax FIR_design.md -o FIR_design_pandoc.html ; echo "Testing mdw => tex => pdf:" ; pweave -f pandoc2latex FIR_design.mdw ; pdflatex FIR_design.tex autopkgtest [19:41:25]: test command1: [--- Testing texw => tex => pdf: Exception: Unknown window type. Error messages will be included in output document -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1029693: python-bumps: tests fail with scipy 1.10
Package: python-bumps Version: 0.9.0-2 Severity: normal scipy 1.10 is now available in experimental. bumps fails debci tests using it. We are considering uploading scipy 1.10 to unstable in order to included it in the forthcoming stable release. If we proceed with that, then this bug will become Severity: serious. The errors are AttributeError: 'multivariate_normal_frozen' object has no attribute 'cov' A sample from the failing test log is _ test _ def test(): """check entropy estimates from known distributions""" # entropy test is optional: don't test if sklearn is not installed try: import sklearn except ImportError: return # Smoke test - do all the methods run in 1-D and 10-D? _check_smoke(stats.norm(10, 8)) if hasattr(stats, 'multivariate_normal'): _check_smoke(stats.multivariate_normal(cov=np.diag([1]*10))) D = stats.norm(10, 8) _check_entropy("N[100,8]", D, N=2000) _check_entropy("N[100,8]", D, N=12000) if hasattr(stats, 'multivariate_normal'): D = stats.multivariate_normal(cov=np.diag([1, 12**2, 0.2**2])) _check_entropy("MVN[1,12,0.2]", D) D = stats.multivariate_normal(cov=np.diag([1]*10)) _check_entropy("MVN[1]*10", D, N=1) # Make sure zero-width dimensions return H = -inf D = MVNSingular(cov=np.diag([1, 1, 0])) > _check_entropy("MVN[1,1,0]", D, N=1) /usr/lib/python3/dist-packages/bumps/dream/entropy.py:1074: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/bumps/dream/entropy.py:1010: in _check_entropy H = D.entropy()/LN2 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = , N = 1 def entropy(self, N=1): with np.errstate(divide='ignore'): > return 0.5*log(np.linalg.det((2*pi*np.e)*self.dist.cov)) E AttributeError: 'multivariate_normal_frozen' object has no attribute 'cov' /usr/lib/python3/dist-packages/bumps/dream/entropy.py:863: AttributeError -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1029701: scikit-learn: tests fail with scipy 1.10
Package: scikit-learn Version: 1.1.2+dfsg-92 Severity: normal scipy 1.10 is now available in experimental. scikit-learn fails debci tests using it. We are considering uploading scipy 1.10 to unstable in order to included it in the forthcoming stable release. If we proceed with that, then this bug will become Severity: serious. test_search.py is affected A sample from the failing test log is _ test_grid_search_failing_classifier __ def test_grid_search_failing_classifier(): # GridSearchCV with on_error != 'raise' # Ensures that a warning is raised and score reset where appropriate. X, y = make_classification(n_samples=20, n_features=10, random_state=0) clf = FailingClassifier() # refit=False because we only want to check that errors caused by fits # to individual folds will be caught and warnings raised instead. If # refit was done, then an exception would be raised on refit and not # caught by grid_search (expected behavior), and this would cause an # error in this test. gs = GridSearchCV( clf, [{"parameter": [0, 1, 2]}], scoring="accuracy", refit=False, error_score=0.0, ) warning_message = re.compile( "5 fits failed.+total of 15.+The score on these" r" train-test partitions for these parameters will be set to 0\.0.+" "5 fits failed with the following error.+ValueError.+Failing classifier failed" " as required", flags=re.DOTALL, ) with pytest.warns(FitFailedWarning, match=warning_message): gs.fit(X, y) n_candidates = len(gs.cv_results_["params"]) # Ensure that grid scores were set to zero as required for those fits # that are expected to fail. def get_cand_scores(i): return np.array( list( gs.cv_results_["split%d_test_score" % s][i] for s in range(gs.n_splits_) ) ) assert all( ( np.all(get_cand_scores(cand_i) == 0.0) for cand_i in range(n_candidates) if gs.cv_results_["param_parameter"][cand_i] == FailingClassifier.FAILING_PARAMETER ) ) gs = GridSearchCV( clf, [{"parameter": [0, 1, 2]}], scoring="accuracy", refit=False, error_score=float("nan"), ) warning_message = re.compile( "5 fits failed.+total of 15.+The score on these" r" train-test partitions for these parameters will be set to nan.+" "5 fits failed with the following error.+ValueError.+Failing classifier failed" " as required", flags=re.DOTALL, ) with pytest.warns(FitFailedWarning, match=warning_message): gs.fit(X, y) n_candidates = len(gs.cv_results_["params"]) assert all( np.all(np.isnan(get_cand_scores(cand_i))) for cand_i in range(n_candidates) if gs.cv_results_["param_parameter"][cand_i] == FailingClassifier.FAILING_PARAMETER ) ranks = gs.cv_results_["rank_test_score"] # Check that succeeded estimators have lower ranks assert ranks[0] <= 2 and ranks[1] <= 2 # Check that failed estimator has the highest rank > assert ranks[clf.FAILING_PARAMETER] == 3 E assert -2147483648 == 3 /usr/lib/python3/dist-packages/sklearn/model_selection/tests/test_search.py:1630: AssertionError -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processed: closing 1029276
Processing commands for cont...@bugs.debian.org: > close 1029276 3.12.1+dfsg3-4 Bug #1029276 [src:dials] dials: autopkgtest failure Marked as fixed in versions dials/3.12.1+dfsg3-4. Bug #1029276 [src:dials] dials: autopkgtest failure Marked Bug as done > thanks Stopping processing here. Please contact me if you need assistance. -- 1029276: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029276 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
python-bumps_0.9.0-3_source.changes ACCEPTED into unstable
Thank you for your contribution to Debian. Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 26 Jan 2023 17:07:11 +0100 Source: python-bumps Architecture: source Version: 0.9.0-3 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Drew Parsons Closes: 1029693 Changes: python-bumps (0.9.0-3) unstable; urgency=medium . * debian patch scipy_1.10.patch patches covariance handling to allow for changes in scipy 1.10 (stats.Covariance). See Upstream Issue #118. Closes: #1029693. * Standards-Version: 4.6.2 Checksums-Sha1: b7c9ed69c77e36319eef5ccf2e0ba3c6e9b11660 2649 python-bumps_0.9.0-3.dsc b5c28871d45c3359e9bc00050cc8fe02982744a0 14264 python-bumps_0.9.0-3.debian.tar.xz Checksums-Sha256: 094a3ada91a9ef480abc3bcfe876d4ded69015ef3f26fbdd676ae11c18add59e 2649 python-bumps_0.9.0-3.dsc fef5736ab605bfef9dcdec34838a67c6be32bef61735364b31b200dc9121a0cc 14264 python-bumps_0.9.0-3.debian.tar.xz Files: c350078948731f38641819f3ff25b4b9 2649 science optional python-bumps_0.9.0-3.dsc 8d5fd61b619f311b8c9fa5d5f27e26ac 14264 science optional python-bumps_0.9.0-3.debian.tar.xz -BEGIN PGP SIGNATURE- iQIzBAEBCAAdFiEEI8mpPlhYGekSbQo2Vz7x5L1aAfoFAmPSp7oACgkQVz7x5L1a AfrX/Q//ZGGsjHhSjPV6upgx3jkmdHv87aJFMd4mzyzMH9s9sclA7n3adDA4sb5U 2fG5VSUO+311+SWvISh/gfuPG02jLbAju4hD6OoVhZJFc5ePKQcEbOuGvD2R9oW6 I3NERpG43uG7KtOXgnJokOSWE3PzcbE3OvaDRnGQmEcKkFsD99ojr8QyFdhwRQ7z ldaMqrQwUaHNIKYakJJxh28xQA0IUsxAXQ4/JhqGdZLDwiTyFcx2Dw/qtD4Acf+h o1hILqtKuFPeo2gFLkeW9eoGpMtrza0zujwQcfTNvGW4+QXG+KEdpJO7LBDubzt2 bZVTPuDGrtzx6fqJV/NbgwkwM6AfFYjUZcTHpWt4ZQpxEbaQh0vgv7FaqiOhScVd nOOoOPSq8IA4FwrMD6JRyuZTAXE96C5BhcrpSNIFcnXGxnfm2LfWrPSRKzmDNIzf OlPuSLubhQh1bu8yIfPOGdIheiKJnsCstaLW4+kPTmvD6jYXj53XbblvDBgOaiCT dK1D7AGmqAcqBX27Us5qAUbcUY5nj9E58PLtJhq/uF72GKGBIRnJJRrM2lylmbSt LXsHh5UfD9gWoj9JUKEVGkX2FzmvFfk8QoD3oU8lskX0I/7OkJ8iwHsUM5UIXRka X4aCKUq8go/vKAJ7+E36ebNn+GH/hpKUFJ8isXyePUnPklzFTeE= =Cz9m -END PGP SIGNATURE- -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_source.changes
facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_source.changes uploaded successfully to localhost along with the files: facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.dsc facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.debian.tar.xz facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_amd64.buildinfo Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1029693: marked as done (python-bumps: tests fail with scipy 1.10)
Your message dated Thu, 26 Jan 2023 16:34:50 + with message-id and subject line Bug#1029693: fixed in python-bumps 0.9.0-3 has caused the Debian Bug report #1029693, regarding python-bumps: tests fail with scipy 1.10 to be marked as done. This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 1029693: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029693 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems --- Begin Message --- Package: python-bumps Version: 0.9.0-2 Severity: normal scipy 1.10 is now available in experimental. bumps fails debci tests using it. We are considering uploading scipy 1.10 to unstable in order to included it in the forthcoming stable release. If we proceed with that, then this bug will become Severity: serious. The errors are AttributeError: 'multivariate_normal_frozen' object has no attribute 'cov' A sample from the failing test log is _ test _ def test(): """check entropy estimates from known distributions""" # entropy test is optional: don't test if sklearn is not installed try: import sklearn except ImportError: return # Smoke test - do all the methods run in 1-D and 10-D? _check_smoke(stats.norm(10, 8)) if hasattr(stats, 'multivariate_normal'): _check_smoke(stats.multivariate_normal(cov=np.diag([1]*10))) D = stats.norm(10, 8) _check_entropy("N[100,8]", D, N=2000) _check_entropy("N[100,8]", D, N=12000) if hasattr(stats, 'multivariate_normal'): D = stats.multivariate_normal(cov=np.diag([1, 12**2, 0.2**2])) _check_entropy("MVN[1,12,0.2]", D) D = stats.multivariate_normal(cov=np.diag([1]*10)) _check_entropy("MVN[1]*10", D, N=1) # Make sure zero-width dimensions return H = -inf D = MVNSingular(cov=np.diag([1, 1, 0])) > _check_entropy("MVN[1,1,0]", D, N=1) /usr/lib/python3/dist-packages/bumps/dream/entropy.py:1074: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ /usr/lib/python3/dist-packages/bumps/dream/entropy.py:1010: in _check_entropy H = D.entropy()/LN2 _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ self = , N = 1 def entropy(self, N=1): with np.errstate(divide='ignore'): > return 0.5*log(np.linalg.det((2*pi*np.e)*self.dist.cov)) E AttributeError: 'multivariate_normal_frozen' object has no attribute 'cov' /usr/lib/python3/dist-packages/bumps/dream/entropy.py:863: AttributeError --- End Message --- --- Begin Message --- Source: python-bumps Source-Version: 0.9.0-3 Done: Drew Parsons We believe that the bug you reported is fixed in the latest version of python-bumps, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to 1029...@bugs.debian.org, and the maintainer will reopen the bug report if appropriate. Debian distribution maintenance software pp. Drew Parsons (supplier of updated python-bumps package) (This message was generated automatically at their request; if you believe that there is a problem with it please contact the archive administrators by mailing ftpmas...@ftp-master.debian.org) -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Thu, 26 Jan 2023 17:07:11 +0100 Source: python-bumps Architecture: source Version: 0.9.0-3 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Drew Parsons Closes: 1029693 Changes: python-bumps (0.9.0-3) unstable; urgency=medium . * debian patch scipy_1.10.patch patches covariance handling to allow for changes in scipy 1.10 (stats.Covariance). See Upstream Issue #118. Closes: #1029693. * Standards-Version: 4.6.2 Checksums-Sha1: b7c9ed69c77e36319eef5ccf2e0ba3c6e9b11660 2649 python-bumps_0.9.0-3.dsc b5c28871d45c3359e9bc00050cc8fe02982744a0 14264 python-bumps_0.9.0-3.debian.tar.xz Checksums-Sha256: 094a3ada91a9ef480abc3bcfe876d4ded69015ef3f26fbdd676ae11c18add59e 2649 python-bumps_0.9.0-3.dsc fef5736ab605bfef9dcdec34838a67c6be32bef61735364b31b200dc9121a0cc 14264 python-bumps_0.9.0-3.debian.tar.xz Files: c350078948731f38641819f3ff25b4b9 2649 science optional python-bumps_0.9.0-3.dsc 8d5fd61b619f311b8c9fa5d5f27e26ac 14264 science optional
Bug#1029247: marked as done (facet-analyser: FTBFS: unsatisfiable build-dependencies: libvtkgdcm-cil, libvtkgdcm-java)
Your message dated Thu, 26 Jan 2023 16:34:13 + with message-id and subject line Bug#1029247: fixed in facet-analyser 0.0~git20221121142040.6be10b8+ds1-2 has caused the Debian Bug report #1029247, regarding facet-analyser: FTBFS: unsatisfiable build-dependencies: libvtkgdcm-cil, libvtkgdcm-java to be marked as done. This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact ow...@bugs.debian.org immediately.) -- 1029247: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029247 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems --- Begin Message --- Source: facet-analyser Version: 0.0~git20221121142040.6be10b8+ds1-1 Severity: serious Justification: FTBFS Tags: bookworm sid ftbfs User: lu...@debian.org Usertags: ftbfs-20230120 ftbfs-bookworm Hi, During a rebuild of all packages in sid, your package failed to build on amd64. Relevant part (hopefully): > +--+ > | Install package build dependencies > | > +--+ > > > Setup apt archive > - > > Merged Build-Depends: cmake, debhelper-compat (= 13), > libdouble-conversion-dev, libfftw3-dev, libgdcm-tools, > libinsighttoolkit5-dev, liblz4-dev, libopengl-dev, libqt5opengl5-dev, > libqt5svg5-dev, libutfcpp-dev, libvtk7-dev, libvtkgdcm-cil, libvtkgdcm-dev, > libvtkgdcm-java, libx11-dev, paraview-dev, python3-paraview, python3-vtkgdcm, > qtbase5-dev, qttools5-dev, qtxmlpatterns5-dev-tools, xalan, xvfb, xauth, > build-essential, fakeroot > Filtered Build-Depends: cmake, debhelper-compat (= 13), > libdouble-conversion-dev, libfftw3-dev, libgdcm-tools, > libinsighttoolkit5-dev, liblz4-dev, libopengl-dev, libqt5opengl5-dev, > libqt5svg5-dev, libutfcpp-dev, libvtk7-dev, libvtkgdcm-cil, libvtkgdcm-dev, > libvtkgdcm-java, libx11-dev, paraview-dev, python3-paraview, python3-vtkgdcm, > qtbase5-dev, qttools5-dev, qtxmlpatterns5-dev-tools, xalan, xvfb, xauth, > build-essential, fakeroot > dpkg-deb: building package 'sbuild-build-depends-main-dummy' in > '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. > Ign:1 copy:/<>/apt_archive ./ InRelease > Get:2 copy:/<>/apt_archive ./ Release [960 B] > Ign:3 copy:/<>/apt_archive ./ Release.gpg > Get:4 copy:/<>/apt_archive ./ Sources [528 B] > Get:5 copy:/<>/apt_archive ./ Packages [604 B] > Fetched 2092 B in 0s (150 kB/s) > Reading package lists... > Reading package lists... > > Install main build dependencies (apt-based resolver) > > > Installing build dependencies > Reading package lists... > Building dependency tree... > Some packages could not be installed. This may mean that you have > requested an impossible situation or if you are using the unstable > distribution that some required packages have not yet been created > or been moved out of Incoming. > The following information may help to resolve the situation: > > The following packages have unmet dependencies: > sbuild-build-depends-main-dummy : Depends: libvtkgdcm-cil but it is not > installable >Depends: libvtkgdcm-java but it is not > installable > E: Unable to correct problems, you have held broken packages. > apt-get failed. The full build log is available from: http://qa-logs.debian.net/2023/01/20/facet-analyser_0.0~git20221121142040.6be10b8+ds1-1_unstable.log All bugs filed during this archive rebuild are listed at: https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20230120;users=lu...@debian.org or: https://udd.debian.org/bugs/?release=na=ign=7=7=only=ftbfs-20230120=lu...@debian.org=1=1=1=1#results A list of current common problems and possible solutions is available at http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute! If you reassign this bug to another package, please mark it as 'affects'-ing this package. See https://www.debian.org/Bugs/server-control#affects If you fail to reproduce this, please provide a build log and diff it with mine so that we can identify if something relevant changed in the meantime. --- End Message --- --- Begin Message --- Source: facet-analyser Source-Version: 0.0~git20221121142040.6be10b8+ds1-2 Done: Roland Mas We believe that the bug you reported is fixed in the latest version of facet-analyser, which is due to be installed in the Debian FTP archive. A summary of the changes between this version and the previous one is attached. Thank you for reporting the bug, which will now be closed. If you have further comments please address them to
bluebrain-hpc-coding-conventions_1.0.0+git20221201-1_amd64.changes is NEW
binary:bluebrain-hpc-coding-conventions is NEW. binary:bluebrain-hpc-coding-conventions is NEW. source:bluebrain-hpc-coding-conventions is NEW. Your package has been put into the NEW queue, which requires manual action from the ftpteam to process. The upload was otherwise valid (it had a good OpenPGP signature and file hashes are valid), so please be patient. Packages are routinely processed through to the archive, and do feel free to browse the NEW queue[1]. If there is an issue with the upload, you will receive an email from a member of the ftpteam. If you have any questions, you may reply to this email. [1]: https://ftp-master.debian.org/new.html or https://ftp-master.debian.org/backports-new.html for *-backports -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of python-bumps_0.9.0-3_source.changes
python-bumps_0.9.0-3_source.changes uploaded successfully to localhost along with the files: python-bumps_0.9.0-3.dsc python-bumps_0.9.0-3.debian.tar.xz Greetings, Your Debian queue daemon (running on host usper.debian.org) -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_source.changes ACCEPTED into unstable
Thank you for your contribution to Debian. Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA512 Format: 1.8 Date: Thu, 26 Jan 2023 17:13:27 +0100 Source: facet-analyser Architecture: source Version: 0.0~git20221121142040.6be10b8+ds1-2 Distribution: unstable Urgency: medium Maintainer: Debian Science Maintainers Changed-By: Roland Mas Closes: 1029247 Changes: facet-analyser (0.0~git20221121142040.6be10b8+ds1-2) unstable; urgency=medium . * Bug fix: "FTBFS: unsatisfiable build-dependencies: libvtkgdcm-cil, libvtkgdcm-java", thanks to Lucas Nussbaum (Closes: #1029247). * Remove those two packages from build-depends: they're no longer available, and they were not used during the build anyway. Checksums-Sha1: f6814fb94c9dd983fe812259e2d78f697d8ed8db 2588 facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.dsc 348986849c5eaa4e2507398b688257cd6dd4f73d 9936 facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.debian.tar.xz dcca2f26c0de4fee7d4c4d55737d9046aebd8774 25956 facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_amd64.buildinfo Checksums-Sha256: 26faae623b7df5398b08892b55d67f7bf58284da6e4ff3cc14d6cf3269df504f 2588 facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.dsc 69e74c86fc751ec886d4e2935c83ef425e61dfa3bd9938ac12c6b3c3205a514e 9936 facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.debian.tar.xz cc5e8c1eacbc32089019ebc8dceb382d9ccf6413d3bf30ffa0c60121e44a1814 25956 facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_amd64.buildinfo Files: b20f0553d0d790ad458d484fe04cd34e 2588 science optional facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.dsc 27057f6182cca43d9371db09987b0222 9936 science optional facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.debian.tar.xz 25c46d085c8d028b85af92ac8976d3a1 25956 science optional facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_amd64.buildinfo -BEGIN PGP SIGNATURE- iQIzBAEBCgAdFiEEtBU2D1kett1zr/uD0w3s0lmTIvwFAmPSqLoACgkQ0w3s0lmT IvzCFg/9EyXYmRpRXpIXYrtjQ7wgyUhtZggj93HypH4BkwhKryovc4eYeGGFBY5m 3kIg5eUTQ+G5xIraRJiIGA8Jf3cNoJ5O5DyhX2m2gHhf21nNsUrhQqWqaJCHvHx3 XZ4SpblQfrVbId8of7gIrljJZuGQwV4wdsL0o+eJRB6fUog9an2joc6YYOtczud2 9Gcew+h7KhfmPNaV2cuRfIXHsRr+qZh6myLe2vJuu4ubaJVHYv5jz91tK3EEAzTa TxdgHgJjyCdDFVEEeQ8swNc6jAOLaGIqC4icJufsqg/0AQb4DC7hcFpx2lipG3O1 u3FQjf+yoVJF+Tom/MfooNK6P5lC1UWu/Yzr/z0NGrGa9kTbZbJyrLq2sNrlfU7L fUfgQHos11mzLMI5HomwVXQDSW50Dvp6VcL4rvS/rn56EOMdAwgCoNouxx8ajuH7 7aHQhQF5JXS/1BQ48Jt9iQs76bSiS0P4gAts9hlYluwBldnHdWjHFYYvyNDkscBO e2zNYsKtvWeR4DACxdb8H4OY1fk2x7va3yjpzX4WomLyBBol7DTlh46t+vP0x/lO emHn2HQBqqAfrO/WoDE0abf0lePAhaoZA1FIaFC1GHcHldR+UHe+TQ13Kqwp9Sv1 PqesUq8cSC6q95Movl6epXDR46XV0P8UhddR5Trq9u1u5QStbPU= =lUpl -END PGP SIGNATURE- -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
KFS: Dotacja do edukacji w biznesie
Dzień dobry, Chciałabym nawiązać z Państwem współpracę w zakresie dotowanych, zamkniętych kursów dla podmiotów gospodarczych i instytucji. Dotacja wynoisi od 80% (10 i więcej zatrudnionych) do 100% (gdy firma zatrudnia poniżej 10 osób). Uprzejmie proszę także potwierdzenie bądź podanie kodu pocztowego Państwa siedziby oraz informacji czy na umowę o pracę zatrudniacie Państwo od 3 do 9 osób czy 10 i więcej. Kod pocztowy: brak Zatrudnienie: X osób na umowę o pracę Wiem, że czas jest cenny, ale dzięki chwili poświęconej na odpowiedź, będę mogła przekazać więcej szczegółów na temat naszych kursów. W przeciwnym razie poproszę maila z treścią "brak zgody", to spowoduje zapomnienie adresu debian-science-maintain...@lists.alioth.debian.org z poważaniem, Zuzanna, Specjalista ds. edukacji 51CAF38266DA667724A3CAB8ADA47581-- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processed: scikit-learn Re: Are we still trying to do scipy 1.10, given transition freeze?
Processing control commands: > tags 1029701 fixed-upstream Bug #1029701 [scikit-learn] scikit-learn: tests fail with scipy 1.10 Added tag(s) fixed-upstream. -- 1027244: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1027244 1029701: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029701 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1029701: scikit-learn Re: Are we still trying to do scipy 1.10, given transition freeze?
Control: tags 1029701 fixed-upstream Full log: https://ci.debian.net/data/autopkgtest/unstable/amd64/s/scikit-learn/30693526/log.gz There appear to be at least 2 separate failures here, both known and probably fixed upstream. So yes, 'new upstream version' is the first thing to try, but we'll need to check what _that_ breaks. https://github.com/scikit-learn/scikit-learn/issues/23626 https://github.com/scikit-learn/scikit-learn/issues/24424 -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processed: scikit-learn Re: Are we still trying to do scipy 1.10, given transition freeze?
Processing control commands: > tags 1029701 fixed-upstream Bug #1029701 [scikit-learn] scikit-learn: tests fail with scipy 1.10 Ignoring request to alter tags of bug #1029701 to the same tags previously set -- 1029701: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029701 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
fenics-ufl_2023.1.0-1exp2_amd64.changes ACCEPTED into experimental
Thank you for your contribution to Debian. Accepted: -BEGIN PGP SIGNED MESSAGE- Hash: SHA256 Format: 1.8 Date: Mon, 16 Jan 2023 03:08:52 +0100 Source: fenics-ufl Binary: python-ufl-doc python3-ufl Architecture: source all Version: 2023.1.0-1exp2 Distribution: experimental Urgency: medium Maintainer: Debian Science Team Changed-By: Drew Parsons Description: python-ufl-doc - documentation and demos for UFL python3-ufl - unified language for form-compilers (Python 3) Changes: fenics-ufl (2023.1.0-1exp2) experimental; urgency=medium . * Change source package name to fenics-ufl. The 2023.1.0 release has now diverged far enough that old dolfin now breaks completely. Need to distinguish current ufl (this package, for ffcx, dolfinx) from legacy ufl. Binary packages remain unchanged, in line with upstream package naming practice (ufl was never updated to uflx, unlike ffc which was updated as ffcx). * provide full docs (HTML) in doc package - Build-Depends: python3-sphinx, libjs-mathjax Checksums-Sha1: 5add942fa831cb32a7c96cd619f7150ce474251c 2320 fenics-ufl_2023.1.0-1exp2.dsc fb2de9782a577510f837c487b27cf3cb700dbdac 324246 fenics-ufl_2023.1.0.orig.tar.gz 915c38de645b3bd0a7dda73d8e853212723ce86e 7044 fenics-ufl_2023.1.0-1exp2.debian.tar.xz 74fca3c75c25d7a3e3ebf2c843f2b99601e5651b 8525 fenics-ufl_2023.1.0-1exp2_amd64.buildinfo c2e2361ddbc35f16d562994137911aaf63338594 467444 python-ufl-doc_2023.1.0-1exp2_all.deb 432a50a03f80fd6d2c6dc930e9ff126b6079bce6 166316 python3-ufl_2023.1.0-1exp2_all.deb Checksums-Sha256: b53aa1d951772f440d4e242ee1483bb6f76d47b6a70e85f5f50d1ad4e69c2c6a 2320 fenics-ufl_2023.1.0-1exp2.dsc 5b98f06d59155cff3bc9e0527ba1785946bbce66c83a42fe4ceda777e8478845 324246 fenics-ufl_2023.1.0.orig.tar.gz 8bd1e1d4a9a0c80f9d5b6baf61040bb454e111d011752f519be94ec4cdb2ed35 7044 fenics-ufl_2023.1.0-1exp2.debian.tar.xz 2a334c999eddd1c488059a5b77f293e95676e925e33f1ae47a81c0dbd78a72ce 8525 fenics-ufl_2023.1.0-1exp2_amd64.buildinfo 30001d96ea2be5e1d35e59bce80ec2579e1d26c66105c23368a685244334669c 467444 python-ufl-doc_2023.1.0-1exp2_all.deb 7152e719d644b110b364d18a2fb09763caaf9d6948273dbbf67171a1bc35f4f9 166316 python3-ufl_2023.1.0-1exp2_all.deb Files: 04b3b1f4315902b0bb0428b7505d8811 2320 python optional fenics-ufl_2023.1.0-1exp2.dsc d7dd28b280ffaef8b860511ec1ada6d0 324246 python optional fenics-ufl_2023.1.0.orig.tar.gz 0c3ac36faf95b76230c528b853f3589c 7044 python optional fenics-ufl_2023.1.0-1exp2.debian.tar.xz cf5a68627e5a49edf594741885c94c71 8525 python optional fenics-ufl_2023.1.0-1exp2_amd64.buildinfo 5d81a132b87a4d3c7ef80c2b7bbf250c 467444 doc optional python-ufl-doc_2023.1.0-1exp2_all.deb 97bfbfdd27db20649377a925720d7f7a 166316 python optional python3-ufl_2023.1.0-1exp2_all.deb -BEGIN PGP SIGNATURE- iQIzBAEBCAAdFiEEI8mpPlhYGekSbQo2Vz7x5L1aAfoFAmPEsoQACgkQVz7x5L1a Afo8aBAAoA2NhMPY9ePjl4AruqQWMGU0cC1IzWu5dzQkks7X8pK3LvbNxB4KtuR9 QJ15OGHmigMZJEfXtyK0PfGDm/C81mt82h/x6DllaeiQP/4eRmbHcUh821sQa0bI Os4o/TGN4nF/4A2UezIbi+DAl+Oeb8bAq1sn7oYKVGfRbJLN8bQihEDHiS7iUO8a xA96wOvAci9Gtc9YBAEsTandS7ZhMYFW5q1uQWZYpG//FWbQoDu0WFSxsbMHqw3t qPNVQ13aBgFfNWJ1J/oxKCPztk+KgU3lNOTaUycgwADj56lwTdj/F5HMorDSpQak ZI32+3XAj6+t47UmUO3yefctdD39vfQjJQDzw2BUDhaGDBFIXfwFoLWTJZh92/Nl eksaTPn/fF47E2hfg+mg+VTpPhpr9zbavfm2Vevn1LzcPliySYpT0BJk1n3NfG9R aYTO5BhC0m9zRlIHEf6Vb63e3wLmzP1lWGUoqcGaxYDRbomR7WX1sRDBUF1wwIxG xlv/mP8dyuEYqiAihsBHOGvQpR5G18lsjs10O/LwggFx+iEoRE9ca2N5t0iBhSLG Kz8X+CAmWSt9MJIOtrrqAR3GM4VyJPPGTac4CwcFQF/QIdpIDI5cvDduz+uGOdxG hllSwl0p3mt4K2GFIQekBE4ky+vxEw6Ct1UD+0byLPcvithCS5k= =Ea5R -END PGP SIGNATURE- -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
nmodl_0.4-1_amd64.changes is NEW
binary:nmodl is NEW. binary:python3-nmodl is NEW. binary:nmodl is NEW. binary:python3-nmodl is NEW. source:nmodl is NEW. Your package has been put into the NEW queue, which requires manual action from the ftpteam to process. The upload was otherwise valid (it had a good OpenPGP signature and file hashes are valid), so please be patient. Packages are routinely processed through to the archive, and do feel free to browse the NEW queue[1]. If there is an issue with the upload, you will receive an email from a member of the ftpteam. If you have any questions, you may reply to this email. [1]: https://ftp-master.debian.org/new.html or https://ftp-master.debian.org/backports-new.html for *-backports -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processed: fixed 1004869 in 2022.12.0-2
Processing commands for cont...@bugs.debian.org: > fixed 1004869 2022.12.0-2 Bug #1004869 [src:python-xarray] python-xarray: autopkgtest regression on i386 Marked as fixed in versions python-xarray/2022.12.0-2. > thanks Stopping processing here. Please contact me if you need assistance. -- 1004869: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1004869 Debian Bug Tracking System Contact ow...@bugs.debian.org with problems -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#1025183: silx: (autopkgtest) needs update for python3.11: Segmentation fault
Hello, While I can't confirm the original error in the bug report, I can confirm that the autopkgtests fail with Python 3.11, and require some fixes. I have uploaded a fix for this to Ubuntu, the delta is attached. I also uploaded this to DELAYED/2 (the fix is non-intrusive and only affects the test suite, so it should be safe). Please let me know if you would like this delayed further, cancelled, or expedited. Thanks, -- Simon Quigley si...@tsimonq2.net tsimonq2 on LiberaChat and OFTC @tsimonq2:linuxdelta.com on Matrix 5C7A BEA2 0F86 3045 9CC8 C8B5 E27F 2CF8 458C 2FA4 diff -Nru silx-1.1.0+dfsg/debian/changelog silx-1.1.0+dfsg/debian/changelog --- silx-1.1.0+dfsg/debian/changelog 2022-11-04 15:54:24.0 + +++ silx-1.1.0+dfsg/debian/changelog 2023-01-26 22:56:43.0 + @@ -1,3 +1,9 @@ +silx (1.1.0+dfsg-3ubuntu1) lunar; urgency=medium + + * Add a patch fixing the build with Python 3.11. + + -- Simon Quigley Thu, 26 Jan 2023 16:56:43 -0600 + silx (1.1.0+dfsg-3) unstable; urgency=medium * do not run test which use lot's of memory diff -Nru silx-1.1.0+dfsg/debian/control silx-1.1.0+dfsg/debian/control --- silx-1.1.0+dfsg/debian/control 2022-11-04 15:54:24.0 + +++ silx-1.1.0+dfsg/debian/control 2023-01-26 22:56:43.0 + @@ -1,5 +1,6 @@ Source: silx -Maintainer: Debian Science Maintainers +Maintainer: Ubuntu Developers +XSBC-Original-Maintainer: Debian Science Maintainers Uploaders: Jerome Kieffer , Picca Frédéric-Emmanuel , diff -Nru silx-1.1.0+dfsg/debian/patches/0008-python3.11-fix.patch silx-1.1.0+dfsg/debian/patches/0008-python3.11-fix.patch --- silx-1.1.0+dfsg/debian/patches/0008-python3.11-fix.patch 1970-01-01 00:00:00.0 + +++ silx-1.1.0+dfsg/debian/patches/0008-python3.11-fix.patch 2023-01-26 22:56:38.0 + @@ -0,0 +1,27 @@ +Description: Remove special-case for Python 3.11 +Author: Simon Quigley +Origin: vendor +Last-Update: 2023-01-26 +--- +This patch header follows DEP-3: http://dep.debian.net/deps/dep3/ +--- a/src/silx/gui/utils/testutils.py b/src/silx/gui/utils/testutils.py +@@ -141,14 +141,10 @@ class TestCaseQt(unittest.TestCase): + + def _currentTestSucceeded(self): + if hasattr(self, '_outcome'): +-if hasattr(self, '_feedErrorsToResult'): +-# For Python 3.4 -3.10 +-result = self.defaultTestResult() # these 2 methods have no side effects +-if hasattr(self._outcome, 'errors'): +-self._feedErrorsToResult(result, self._outcome.errors) +-else: +-# Python 3.11+ +-result = self._outcome.result ++# For Python 3.4 -3.10 ++result = self.defaultTestResult() # these 2 methods have no side effects ++if hasattr(self._outcome, 'errors'): ++self._feedErrorsToResult(result, self._outcome.errors) + else: + # For Python < 3.4 + result = getattr(self, '_outcomeForDoCleanups', self._resultForDoCleanups) diff -Nru silx-1.1.0+dfsg/debian/patches/series silx-1.1.0+dfsg/debian/patches/series --- silx-1.1.0+dfsg/debian/patches/series 2022-11-04 15:54:24.0 + +++ silx-1.1.0+dfsg/debian/patches/series 2023-01-26 22:54:36.0 + @@ -5,3 +5,4 @@ 0005-removed-hdf5plugin-from-full-dependencies.patch 0007-python3.10-fix.patch 0007-do-not-install-scipy_spatial-COPYING.txt.patch +0008-python3.11-fix.patch OpenPGP_signature Description: OpenPGP digital signature -- debian-science-maintainers mailing list debian-science-maintainers@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-science-maintainers
Processing of silx_1.1.0+dfsg-3.1_source.changes
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