Processed: reassign 1029599 to git-buildpackage, reassign 1029553 to src:linux, tagging 1029523 ...

2023-01-26 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> reassign 1029599 git-buildpackage
Bug #1029599 [gbp] gbp: Permit to run merge step alone after gbp import-orig 
--no-merge
Warning: Unknown package 'gbp'
Bug reassigned from package 'gbp' to 'git-buildpackage'.
No longer marked as found in versions git-buildpackage.
Ignoring request to alter fixed versions of bug #1029599 to the same values 
previously set
> reassign 1029553 src:linux 6.1.8-1
Bug #1029553 {Done: Bastian Germann } [linux-6.1.8] 
linux-6.1.8: new stable kernel release 6.1.8
Warning: Unknown package 'linux-6.1.8'
Bug reassigned from package 'linux-6.1.8' to 'src:linux'.
Ignoring request to alter found versions of bug #1029553 to the same values 
previously set
Ignoring request to alter fixed versions of bug #1029553 to the same values 
previously set
Bug #1029553 {Done: Bastian Germann } [src:linux] linux-6.1.8: 
new stable kernel release 6.1.8
The source 'linux' and version '6.1.8-1' do not appear to match any binary 
packages
Marked as found in versions linux/6.1.8-1.
> tags 1029523 + experimental
Bug #1029523 {Done: Mohammed Bilal } 
[ruby-net-http-persistent] ruby-net-http-persistent want  Ruby (~> 2.1)
Added tag(s) experimental.
> notfound 976470 1.0.16-1
Bug #976470 [src:reprozip] reprozip: FTBFS on arm64: native/config.h:12:9: 
error: #error Unrecognized architecture!
No longer marked as found in versions reprozip/1.0.16-1.
> notfixed 1025770 5.4.4-3
Bug #1025770 {Done: Sergei Golovan } [lua5.4] lua5.4: 
Provide compiled version of srlua and glue?
No longer marked as fixed in versions lua5.4/5.4.4-3.
> notfixed 1029582 4.1.1-2
Bug #1029582 {Done: Ricardo Mones } [claws-mail] claws-mail: 
Processing rules don't apply to newly-created folders
No longer marked as fixed in versions claws-mail/4.1.1-2.
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
1025770: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1025770
1029523: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029523
1029553: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029553
1029582: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029582
1029599: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029599
976470: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=976470
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Processing of bluebrain-hpc-coding-conventions_1.0.0+git20221201-1_amd64.changes

2023-01-26 Thread Debian FTP Masters
bluebrain-hpc-coding-conventions_1.0.0+git20221201-1_amd64.changes uploaded 
successfully to localhost
along with the files:
  bluebrain-hpc-coding-conventions_1.0.0+git20221201-1.dsc
  bluebrain-hpc-coding-conventions_1.0.0+git20221201.orig.tar.gz
  bluebrain-hpc-coding-conventions_1.0.0+git20221201-1.debian.tar.xz
  bluebrain-hpc-coding-conventions_1.0.0+git20221201-1_all.deb
  bluebrain-hpc-coding-conventions_1.0.0+git20221201-1_amd64.buildinfo

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Bug#1029696: python-pweave: tests fail with scipy 1.10

2023-01-26 Thread Drew Parsons
Package: python-pweave
Version: 0.25-4
Severity: normal

scipy 1.10 is now available in experimental.
python-pweave fails debci tests using it.

We are considering uploading scipy 1.10 to unstable in order to
included it in the forthcoming stable release.  If we proceed with
that, then this bug will become Severity: serious.

The errors are in the LaTeX test build rather than directly from
scipy. It looks like the test failure is triggered simply by the
message going to stderr, which can be ignored by configuring
debian/tests/control to not treat output in stderr as error
(allow-stderr).  The pdf file is generated.  Nevertheless the error
message looks real. Does the pdf file contain the correct content?

A sample from the failing test log is

autopkgtest [19:41:25]: test command1: set -e ; cp debian/tests/examples/FIR_* 
"$AUTOPKGTEST_TMP" ; cd "$AUTOPKGTEST_TMP" ; echo "Testing texw => tex => pdf:" 
; pweave -f tex FIR_design_verb.texw ; pdflatex FIR_design_verb.tex ; echo 
"Testing rstw => rst => html:" ; pweave -f rst FIR_design.rstw ; rst2html 
FIR_design.rst FIR_design_rst.html ; echo "Testing mdw => html (via 
python-markdown):" ; pweave -f md2html FIR_design.mdw ; echo "Testing mdw => md 
=> html (via pandoc):" ; pweave -f pandoc FIR_design.mdw ; pandoc -s --mathjax 
FIR_design.md -o FIR_design_pandoc.html ; echo "Testing mdw => tex => pdf:" ; 
pweave -f pandoc2latex FIR_design.mdw ; pdflatex FIR_design.tex
autopkgtest [19:41:25]: test command1: [---
Testing texw => tex => pdf:
  Exception:
  Unknown window type.
  Error messages will be included in output document

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Bug#1029693: python-bumps: tests fail with scipy 1.10

2023-01-26 Thread Drew Parsons
Package: python-bumps
Version: 0.9.0-2
Severity: normal

scipy 1.10 is now available in experimental.
bumps fails debci tests using it.

We are considering uploading scipy 1.10 to unstable in order to
included it in the forthcoming stable release.  If we proceed with
that, then this bug will become Severity: serious.

The errors are AttributeError: 'multivariate_normal_frozen' object has
no attribute 'cov'
A sample from the failing test log is

_ test _

def test():
"""check entropy estimates from known distributions"""
# entropy test is optional: don't test if sklearn is not installed
try:
import sklearn
except ImportError:
return

# Smoke test - do all the methods run in 1-D and 10-D?
_check_smoke(stats.norm(10, 8))
if hasattr(stats, 'multivariate_normal'):
_check_smoke(stats.multivariate_normal(cov=np.diag([1]*10)))

D = stats.norm(10, 8)
_check_entropy("N[100,8]", D, N=2000)
_check_entropy("N[100,8]", D, N=12000)
if hasattr(stats, 'multivariate_normal'):
D = stats.multivariate_normal(cov=np.diag([1, 12**2, 0.2**2]))
_check_entropy("MVN[1,12,0.2]", D)
D = stats.multivariate_normal(cov=np.diag([1]*10))
_check_entropy("MVN[1]*10", D, N=1)
# Make sure zero-width dimensions return H = -inf
D = MVNSingular(cov=np.diag([1, 1, 0]))
>   _check_entropy("MVN[1,1,0]", D, N=1)

/usr/lib/python3/dist-packages/bumps/dream/entropy.py:1074: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
/usr/lib/python3/dist-packages/bumps/dream/entropy.py:1010: in _check_entropy
H = D.entropy()/LN2
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = , N = 1

def entropy(self, N=1):
with np.errstate(divide='ignore'):
>   return 0.5*log(np.linalg.det((2*pi*np.e)*self.dist.cov))
E   AttributeError: 'multivariate_normal_frozen' object has no 
attribute 'cov'

/usr/lib/python3/dist-packages/bumps/dream/entropy.py:863: AttributeError

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Bug#1029701: scikit-learn: tests fail with scipy 1.10

2023-01-26 Thread Drew Parsons
Package: scikit-learn
Version: 1.1.2+dfsg-92
Severity: normal

scipy 1.10 is now available in experimental.
scikit-learn fails debci tests using it.

We are considering uploading scipy 1.10 to unstable in order to
included it in the forthcoming stable release.  If we proceed with
that, then this bug will become Severity: serious.

test_search.py is affected
A sample from the failing test log is

_ test_grid_search_failing_classifier __

def test_grid_search_failing_classifier():
# GridSearchCV with on_error != 'raise'
# Ensures that a warning is raised and score reset where appropriate.

X, y = make_classification(n_samples=20, n_features=10, random_state=0)

clf = FailingClassifier()

# refit=False because we only want to check that errors caused by fits
# to individual folds will be caught and warnings raised instead. If
# refit was done, then an exception would be raised on refit and not
# caught by grid_search (expected behavior), and this would cause an
# error in this test.
gs = GridSearchCV(
clf,
[{"parameter": [0, 1, 2]}],
scoring="accuracy",
refit=False,
error_score=0.0,
)

warning_message = re.compile(
"5 fits failed.+total of 15.+The score on these"
r" train-test partitions for these parameters will be set to 0\.0.+"
"5 fits failed with the following error.+ValueError.+Failing 
classifier failed"
" as required",
flags=re.DOTALL,
)
with pytest.warns(FitFailedWarning, match=warning_message):
gs.fit(X, y)
n_candidates = len(gs.cv_results_["params"])

# Ensure that grid scores were set to zero as required for those fits
# that are expected to fail.
def get_cand_scores(i):
return np.array(
list(
gs.cv_results_["split%d_test_score" % s][i] for s in 
range(gs.n_splits_)
)
)

assert all(
(
np.all(get_cand_scores(cand_i) == 0.0)
for cand_i in range(n_candidates)
if gs.cv_results_["param_parameter"][cand_i]
== FailingClassifier.FAILING_PARAMETER
)
)

gs = GridSearchCV(
clf,
[{"parameter": [0, 1, 2]}],
scoring="accuracy",
refit=False,
error_score=float("nan"),
)
warning_message = re.compile(
"5 fits failed.+total of 15.+The score on these"
r" train-test partitions for these parameters will be set to nan.+"
"5 fits failed with the following error.+ValueError.+Failing 
classifier failed"
" as required",
flags=re.DOTALL,
)
with pytest.warns(FitFailedWarning, match=warning_message):
gs.fit(X, y)
n_candidates = len(gs.cv_results_["params"])
assert all(
np.all(np.isnan(get_cand_scores(cand_i)))
for cand_i in range(n_candidates)
if gs.cv_results_["param_parameter"][cand_i]
== FailingClassifier.FAILING_PARAMETER
)

ranks = gs.cv_results_["rank_test_score"]

# Check that succeeded estimators have lower ranks
assert ranks[0] <= 2 and ranks[1] <= 2
# Check that failed estimator has the highest rank
>   assert ranks[clf.FAILING_PARAMETER] == 3
E   assert -2147483648 == 3

/usr/lib/python3/dist-packages/sklearn/model_selection/tests/test_search.py:1630:
 AssertionError

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Processed: closing 1029276

2023-01-26 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> close 1029276 3.12.1+dfsg3-4
Bug #1029276 [src:dials] dials: autopkgtest failure
Marked as fixed in versions dials/3.12.1+dfsg3-4.
Bug #1029276 [src:dials] dials: autopkgtest failure
Marked Bug as done
> thanks
Stopping processing here.

Please contact me if you need assistance.
-- 
1029276: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029276
Debian Bug Tracking System
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python-bumps_0.9.0-3_source.changes ACCEPTED into unstable

2023-01-26 Thread Debian FTP Masters
Thank you for your contribution to Debian.



Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 26 Jan 2023 17:07:11 +0100
Source: python-bumps
Architecture: source
Version: 0.9.0-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Drew Parsons 
Closes: 1029693
Changes:
 python-bumps (0.9.0-3) unstable; urgency=medium
 .
   * debian patch scipy_1.10.patch patches covariance handling to allow
 for changes in scipy 1.10 (stats.Covariance).
 See Upstream Issue #118. Closes: #1029693.
   * Standards-Version: 4.6.2
Checksums-Sha1:
 b7c9ed69c77e36319eef5ccf2e0ba3c6e9b11660 2649 python-bumps_0.9.0-3.dsc
 b5c28871d45c3359e9bc00050cc8fe02982744a0 14264 
python-bumps_0.9.0-3.debian.tar.xz
Checksums-Sha256:
 094a3ada91a9ef480abc3bcfe876d4ded69015ef3f26fbdd676ae11c18add59e 2649 
python-bumps_0.9.0-3.dsc
 fef5736ab605bfef9dcdec34838a67c6be32bef61735364b31b200dc9121a0cc 14264 
python-bumps_0.9.0-3.debian.tar.xz
Files:
 c350078948731f38641819f3ff25b4b9 2649 science optional python-bumps_0.9.0-3.dsc
 8d5fd61b619f311b8c9fa5d5f27e26ac 14264 science optional 
python-bumps_0.9.0-3.debian.tar.xz

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Processing of facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_source.changes

2023-01-26 Thread Debian FTP Masters
facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_source.changes uploaded 
successfully to localhost
along with the files:
  facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.dsc
  facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.debian.tar.xz
  facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_amd64.buildinfo

Greetings,

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Bug#1029693: marked as done (python-bumps: tests fail with scipy 1.10)

2023-01-26 Thread Debian Bug Tracking System
Your message dated Thu, 26 Jan 2023 16:34:50 +
with message-id 
and subject line Bug#1029693: fixed in python-bumps 0.9.0-3
has caused the Debian Bug report #1029693,
regarding python-bumps: tests fail with scipy 1.10
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


-- 
1029693: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029693
Debian Bug Tracking System
Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Package: python-bumps
Version: 0.9.0-2
Severity: normal

scipy 1.10 is now available in experimental.
bumps fails debci tests using it.

We are considering uploading scipy 1.10 to unstable in order to
included it in the forthcoming stable release.  If we proceed with
that, then this bug will become Severity: serious.

The errors are AttributeError: 'multivariate_normal_frozen' object has
no attribute 'cov'
A sample from the failing test log is

_ test _

def test():
"""check entropy estimates from known distributions"""
# entropy test is optional: don't test if sklearn is not installed
try:
import sklearn
except ImportError:
return

# Smoke test - do all the methods run in 1-D and 10-D?
_check_smoke(stats.norm(10, 8))
if hasattr(stats, 'multivariate_normal'):
_check_smoke(stats.multivariate_normal(cov=np.diag([1]*10)))

D = stats.norm(10, 8)
_check_entropy("N[100,8]", D, N=2000)
_check_entropy("N[100,8]", D, N=12000)
if hasattr(stats, 'multivariate_normal'):
D = stats.multivariate_normal(cov=np.diag([1, 12**2, 0.2**2]))
_check_entropy("MVN[1,12,0.2]", D)
D = stats.multivariate_normal(cov=np.diag([1]*10))
_check_entropy("MVN[1]*10", D, N=1)
# Make sure zero-width dimensions return H = -inf
D = MVNSingular(cov=np.diag([1, 1, 0]))
>   _check_entropy("MVN[1,1,0]", D, N=1)

/usr/lib/python3/dist-packages/bumps/dream/entropy.py:1074: 
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 
/usr/lib/python3/dist-packages/bumps/dream/entropy.py:1010: in _check_entropy
H = D.entropy()/LN2
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ 

self = , N = 1

def entropy(self, N=1):
with np.errstate(divide='ignore'):
>   return 0.5*log(np.linalg.det((2*pi*np.e)*self.dist.cov))
E   AttributeError: 'multivariate_normal_frozen' object has no 
attribute 'cov'

/usr/lib/python3/dist-packages/bumps/dream/entropy.py:863: AttributeError
--- End Message ---
--- Begin Message ---
Source: python-bumps
Source-Version: 0.9.0-3
Done: Drew Parsons 

We believe that the bug you reported is fixed in the latest version of
python-bumps, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1029...@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Drew Parsons  (supplier of updated python-bumps package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmas...@ftp-master.debian.org)


-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Thu, 26 Jan 2023 17:07:11 +0100
Source: python-bumps
Architecture: source
Version: 0.9.0-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Drew Parsons 
Closes: 1029693
Changes:
 python-bumps (0.9.0-3) unstable; urgency=medium
 .
   * debian patch scipy_1.10.patch patches covariance handling to allow
 for changes in scipy 1.10 (stats.Covariance).
 See Upstream Issue #118. Closes: #1029693.
   * Standards-Version: 4.6.2
Checksums-Sha1:
 b7c9ed69c77e36319eef5ccf2e0ba3c6e9b11660 2649 python-bumps_0.9.0-3.dsc
 b5c28871d45c3359e9bc00050cc8fe02982744a0 14264 
python-bumps_0.9.0-3.debian.tar.xz
Checksums-Sha256:
 094a3ada91a9ef480abc3bcfe876d4ded69015ef3f26fbdd676ae11c18add59e 2649 
python-bumps_0.9.0-3.dsc
 fef5736ab605bfef9dcdec34838a67c6be32bef61735364b31b200dc9121a0cc 14264 
python-bumps_0.9.0-3.debian.tar.xz
Files:
 c350078948731f38641819f3ff25b4b9 2649 science optional python-bumps_0.9.0-3.dsc
 8d5fd61b619f311b8c9fa5d5f27e26ac 14264 science optional 

Bug#1029247: marked as done (facet-analyser: FTBFS: unsatisfiable build-dependencies: libvtkgdcm-cil, libvtkgdcm-java)

2023-01-26 Thread Debian Bug Tracking System
Your message dated Thu, 26 Jan 2023 16:34:13 +
with message-id 
and subject line Bug#1029247: fixed in facet-analyser 
0.0~git20221121142040.6be10b8+ds1-2
has caused the Debian Bug report #1029247,
regarding facet-analyser: FTBFS: unsatisfiable build-dependencies: 
libvtkgdcm-cil, libvtkgdcm-java
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact ow...@bugs.debian.org
immediately.)


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Contact ow...@bugs.debian.org with problems
--- Begin Message ---
Source: facet-analyser
Version: 0.0~git20221121142040.6be10b8+ds1-1
Severity: serious
Justification: FTBFS
Tags: bookworm sid ftbfs
User: lu...@debian.org
Usertags: ftbfs-20230120 ftbfs-bookworm

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
> +--+
> | Install package build dependencies  
>  |
> +--+
> 
> 
> Setup apt archive
> -
> 
> Merged Build-Depends: cmake, debhelper-compat (= 13), 
> libdouble-conversion-dev, libfftw3-dev, libgdcm-tools, 
> libinsighttoolkit5-dev, liblz4-dev, libopengl-dev, libqt5opengl5-dev, 
> libqt5svg5-dev, libutfcpp-dev, libvtk7-dev, libvtkgdcm-cil, libvtkgdcm-dev, 
> libvtkgdcm-java, libx11-dev, paraview-dev, python3-paraview, python3-vtkgdcm, 
> qtbase5-dev, qttools5-dev, qtxmlpatterns5-dev-tools, xalan, xvfb, xauth, 
> build-essential, fakeroot
> Filtered Build-Depends: cmake, debhelper-compat (= 13), 
> libdouble-conversion-dev, libfftw3-dev, libgdcm-tools, 
> libinsighttoolkit5-dev, liblz4-dev, libopengl-dev, libqt5opengl5-dev, 
> libqt5svg5-dev, libutfcpp-dev, libvtk7-dev, libvtkgdcm-cil, libvtkgdcm-dev, 
> libvtkgdcm-java, libx11-dev, paraview-dev, python3-paraview, python3-vtkgdcm, 
> qtbase5-dev, qttools5-dev, qtxmlpatterns5-dev-tools, xalan, xvfb, xauth, 
> build-essential, fakeroot
> dpkg-deb: building package 'sbuild-build-depends-main-dummy' in 
> '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'.
> Ign:1 copy:/<>/apt_archive ./ InRelease
> Get:2 copy:/<>/apt_archive ./ Release [960 B]
> Ign:3 copy:/<>/apt_archive ./ Release.gpg
> Get:4 copy:/<>/apt_archive ./ Sources [528 B]
> Get:5 copy:/<>/apt_archive ./ Packages [604 B]
> Fetched 2092 B in 0s (150 kB/s)
> Reading package lists...
> Reading package lists...
> 
> Install main build dependencies (apt-based resolver)
> 
> 
> Installing build dependencies
> Reading package lists...
> Building dependency tree...
> Some packages could not be installed. This may mean that you have
> requested an impossible situation or if you are using the unstable
> distribution that some required packages have not yet been created
> or been moved out of Incoming.
> The following information may help to resolve the situation:
> 
> The following packages have unmet dependencies:
>  sbuild-build-depends-main-dummy : Depends: libvtkgdcm-cil but it is not 
> installable
>Depends: libvtkgdcm-java but it is not 
> installable
> E: Unable to correct problems, you have held broken packages.
> apt-get failed.


The full build log is available from:
http://qa-logs.debian.net/2023/01/20/facet-analyser_0.0~git20221121142040.6be10b8+ds1-1_unstable.log

All bugs filed during this archive rebuild are listed at:
https://bugs.debian.org/cgi-bin/pkgreport.cgi?tag=ftbfs-20230120;users=lu...@debian.org
or:
https://udd.debian.org/bugs/?release=na=ign=7=7=only=ftbfs-20230120=lu...@debian.org=1=1=1=1#results

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please mark it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.
--- End Message ---
--- Begin Message ---
Source: facet-analyser
Source-Version: 0.0~git20221121142040.6be10b8+ds1-2
Done: Roland Mas 

We believe that the bug you reported is fixed in the latest version of
facet-analyser, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 

bluebrain-hpc-coding-conventions_1.0.0+git20221201-1_amd64.changes is NEW

2023-01-26 Thread Debian FTP Masters
binary:bluebrain-hpc-coding-conventions is NEW.
binary:bluebrain-hpc-coding-conventions is NEW.
source:bluebrain-hpc-coding-conventions is NEW.

Your package has been put into the NEW queue, which requires manual action
from the ftpteam to process. The upload was otherwise valid (it had a good
OpenPGP signature and file hashes are valid), so please be patient.

Packages are routinely processed through to the archive, and do feel
free to browse the NEW queue[1].

If there is an issue with the upload, you will receive an email from a
member of the ftpteam.

If you have any questions, you may reply to this email.

[1]: https://ftp-master.debian.org/new.html
 or https://ftp-master.debian.org/backports-new.html for *-backports

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Processing of python-bumps_0.9.0-3_source.changes

2023-01-26 Thread Debian FTP Masters
python-bumps_0.9.0-3_source.changes uploaded successfully to localhost
along with the files:
  python-bumps_0.9.0-3.dsc
  python-bumps_0.9.0-3.debian.tar.xz

Greetings,

Your Debian queue daemon (running on host usper.debian.org)

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facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_source.changes ACCEPTED into unstable

2023-01-26 Thread Debian FTP Masters
Thank you for your contribution to Debian.



Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA512

Format: 1.8
Date: Thu, 26 Jan 2023 17:13:27 +0100
Source: facet-analyser
Architecture: source
Version: 0.0~git20221121142040.6be10b8+ds1-2
Distribution: unstable
Urgency: medium
Maintainer: Debian Science Maintainers 

Changed-By: Roland Mas 
Closes: 1029247
Changes:
 facet-analyser (0.0~git20221121142040.6be10b8+ds1-2) unstable; urgency=medium
 .
   * Bug fix: "FTBFS: unsatisfiable build-dependencies: libvtkgdcm-cil,
 libvtkgdcm-java", thanks to Lucas Nussbaum (Closes: #1029247).
   * Remove those two packages from build-depends: they're no longer
 available, and they were not used during the build anyway.
Checksums-Sha1:
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facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.dsc
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facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_amd64.buildinfo
Checksums-Sha256:
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facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_amd64.buildinfo
Files:
 b20f0553d0d790ad458d484fe04cd34e 2588 science optional 
facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.dsc
 27057f6182cca43d9371db09987b0222 9936 science optional 
facet-analyser_0.0~git20221121142040.6be10b8+ds1-2.debian.tar.xz
 25c46d085c8d028b85af92ac8976d3a1 25956 science optional 
facet-analyser_0.0~git20221121142040.6be10b8+ds1-2_amd64.buildinfo

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KFS: Dotacja do edukacji w biznesie

2023-01-26 Thread Zuzanna
Dzień dobry, 

Chciałabym nawiązać z Państwem współpracę w zakresie dotowanych, zamkniętych kursów dla podmiotów gospodarczych i instytucji. Dotacja wynoisi od 80% (10 i więcej zatrudnionych) do 100% (gdy firma zatrudnia poniżej 10 osób). Uprzejmie proszę także potwierdzenie bądź podanie kodu pocztowego Państwa siedziby oraz informacji czy na umowę o pracę zatrudniacie Państwo od 3 do 9 osób czy 10 i więcej. 


Kod pocztowy: brak
Zatrudnienie: X osób na umowę o pracę 
Wiem, że czas jest cenny, ale dzięki chwili poświęconej na odpowiedź, będę mogła przekazać więcej szczegółów na temat naszych kursów.


W przeciwnym razie poproszę maila z treścią "brak zgody", to spowoduje zapomnienie adresu debian-science-maintain...@lists.alioth.debian.org 
z poważaniem,

Zuzanna,
Specjalista ds. edukacji
51CAF38266DA667724A3CAB8ADA47581-- 
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Processed: scikit-learn Re: Are we still trying to do scipy 1.10, given transition freeze?

2023-01-26 Thread Debian Bug Tracking System
Processing control commands:

> tags 1029701 fixed-upstream
Bug #1029701 [scikit-learn] scikit-learn: tests fail with scipy 1.10
Added tag(s) fixed-upstream.

-- 
1027244: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1027244
1029701: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1029701
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Bug#1029701: scikit-learn Re: Are we still trying to do scipy 1.10, given transition freeze?

2023-01-26 Thread Rebecca N. Palmer

Control: tags 1029701 fixed-upstream

Full log: 
https://ci.debian.net/data/autopkgtest/unstable/amd64/s/scikit-learn/30693526/log.gz


There appear to be at least 2 separate failures here, both known and 
probably fixed upstream.  So yes, 'new upstream version' is the first 
thing to try, but we'll need to check what _that_ breaks.


https://github.com/scikit-learn/scikit-learn/issues/23626
https://github.com/scikit-learn/scikit-learn/issues/24424

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Processed: scikit-learn Re: Are we still trying to do scipy 1.10, given transition freeze?

2023-01-26 Thread Debian Bug Tracking System
Processing control commands:

> tags 1029701 fixed-upstream
Bug #1029701 [scikit-learn] scikit-learn: tests fail with scipy 1.10
Ignoring request to alter tags of bug #1029701 to the same tags previously set

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fenics-ufl_2023.1.0-1exp2_amd64.changes ACCEPTED into experimental

2023-01-26 Thread Debian FTP Masters
Thank you for your contribution to Debian.



Accepted:

-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256

Format: 1.8
Date: Mon, 16 Jan 2023 03:08:52 +0100
Source: fenics-ufl
Binary: python-ufl-doc python3-ufl
Architecture: source all
Version: 2023.1.0-1exp2
Distribution: experimental
Urgency: medium
Maintainer: Debian Science Team 

Changed-By: Drew Parsons 
Description:
 python-ufl-doc - documentation and demos for UFL
 python3-ufl - unified language for form-compilers (Python 3)
Changes:
 fenics-ufl (2023.1.0-1exp2) experimental; urgency=medium
 .
   * Change source package name to fenics-ufl.  The 2023.1.0 release
 has now diverged far enough that old dolfin now breaks completely.
 Need to distinguish current ufl (this package, for ffcx, dolfinx)
 from legacy ufl. Binary packages remain unchanged, in line with
 upstream package naming practice (ufl was never updated to uflx,
 unlike ffc which was updated as ffcx).
   * provide full docs (HTML) in doc package
 - Build-Depends: python3-sphinx, libjs-mathjax
Checksums-Sha1:
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 915c38de645b3bd0a7dda73d8e853212723ce86e 7044 
fenics-ufl_2023.1.0-1exp2.debian.tar.xz
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python3-ufl_2023.1.0-1exp2_all.deb
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fenics-ufl_2023.1.0-1exp2.debian.tar.xz
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 7152e719d644b110b364d18a2fb09763caaf9d6948273dbbf67171a1bc35f4f9 166316 
python3-ufl_2023.1.0-1exp2_all.deb
Files:
 04b3b1f4315902b0bb0428b7505d8811 2320 python optional 
fenics-ufl_2023.1.0-1exp2.dsc
 d7dd28b280ffaef8b860511ec1ada6d0 324246 python optional 
fenics-ufl_2023.1.0.orig.tar.gz
 0c3ac36faf95b76230c528b853f3589c 7044 python optional 
fenics-ufl_2023.1.0-1exp2.debian.tar.xz
 cf5a68627e5a49edf594741885c94c71 8525 python optional 
fenics-ufl_2023.1.0-1exp2_amd64.buildinfo
 5d81a132b87a4d3c7ef80c2b7bbf250c 467444 doc optional 
python-ufl-doc_2023.1.0-1exp2_all.deb
 97bfbfdd27db20649377a925720d7f7a 166316 python optional 
python3-ufl_2023.1.0-1exp2_all.deb

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nmodl_0.4-1_amd64.changes is NEW

2023-01-26 Thread Debian FTP Masters
binary:nmodl is NEW.
binary:python3-nmodl is NEW.
binary:nmodl is NEW.
binary:python3-nmodl is NEW.
source:nmodl is NEW.

Your package has been put into the NEW queue, which requires manual action
from the ftpteam to process. The upload was otherwise valid (it had a good
OpenPGP signature and file hashes are valid), so please be patient.

Packages are routinely processed through to the archive, and do feel
free to browse the NEW queue[1].

If there is an issue with the upload, you will receive an email from a
member of the ftpteam.

If you have any questions, you may reply to this email.

[1]: https://ftp-master.debian.org/new.html
 or https://ftp-master.debian.org/backports-new.html for *-backports

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Processed: fixed 1004869 in 2022.12.0-2

2023-01-26 Thread Debian Bug Tracking System
Processing commands for cont...@bugs.debian.org:

> fixed 1004869 2022.12.0-2
Bug #1004869 [src:python-xarray] python-xarray: autopkgtest regression on i386
Marked as fixed in versions python-xarray/2022.12.0-2.
> thanks
Stopping processing here.

Please contact me if you need assistance.
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Bug#1025183: silx: (autopkgtest) needs update for python3.11: Segmentation fault

2023-01-26 Thread Simon Quigley

Hello,

While I can't confirm the original error in the bug report, I can confirm that the autopkgtests fail with Python 3.11, 
and require some fixes.


I have uploaded a fix for this to Ubuntu, the delta is attached. I also uploaded this to DELAYED/2 (the fix is 
non-intrusive and only affects the test suite, so it should be safe). Please let me know if you would like this delayed 
further, cancelled, or expedited.


Thanks,
--
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si...@tsimonq2.net
tsimonq2 on LiberaChat and OFTC
@tsimonq2:linuxdelta.com on Matrix
5C7A BEA2 0F86 3045 9CC8
C8B5 E27F 2CF8 458C 2FA4
diff -Nru silx-1.1.0+dfsg/debian/changelog silx-1.1.0+dfsg/debian/changelog
--- silx-1.1.0+dfsg/debian/changelog	2022-11-04 15:54:24.0 +
+++ silx-1.1.0+dfsg/debian/changelog	2023-01-26 22:56:43.0 +
@@ -1,3 +1,9 @@
+silx (1.1.0+dfsg-3ubuntu1) lunar; urgency=medium
+
+  * Add a patch fixing the build with Python 3.11.
+
+ -- Simon Quigley   Thu, 26 Jan 2023 16:56:43 -0600
+
 silx (1.1.0+dfsg-3) unstable; urgency=medium
 
   * do not run test which use lot's of memory
diff -Nru silx-1.1.0+dfsg/debian/control silx-1.1.0+dfsg/debian/control
--- silx-1.1.0+dfsg/debian/control	2022-11-04 15:54:24.0 +
+++ silx-1.1.0+dfsg/debian/control	2023-01-26 22:56:43.0 +
@@ -1,5 +1,6 @@
 Source: silx
-Maintainer: Debian Science Maintainers 
+Maintainer: Ubuntu Developers 
+XSBC-Original-Maintainer: Debian Science Maintainers 
 Uploaders:
  Jerome Kieffer ,
  Picca Frédéric-Emmanuel ,
diff -Nru silx-1.1.0+dfsg/debian/patches/0008-python3.11-fix.patch silx-1.1.0+dfsg/debian/patches/0008-python3.11-fix.patch
--- silx-1.1.0+dfsg/debian/patches/0008-python3.11-fix.patch	1970-01-01 00:00:00.0 +
+++ silx-1.1.0+dfsg/debian/patches/0008-python3.11-fix.patch	2023-01-26 22:56:38.0 +
@@ -0,0 +1,27 @@
+Description: Remove special-case for Python 3.11
+Author: Simon Quigley 
+Origin: vendor
+Last-Update: 2023-01-26
+---
+This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
+--- a/src/silx/gui/utils/testutils.py
 b/src/silx/gui/utils/testutils.py
+@@ -141,14 +141,10 @@ class TestCaseQt(unittest.TestCase):
+ 
+ def _currentTestSucceeded(self):
+ if hasattr(self, '_outcome'):
+-if hasattr(self, '_feedErrorsToResult'):
+-# For Python 3.4 -3.10
+-result = self.defaultTestResult()  # these 2 methods have no side effects
+-if hasattr(self._outcome, 'errors'):
+-self._feedErrorsToResult(result, self._outcome.errors)
+-else:
+-# Python 3.11+
+-result = self._outcome.result
++# For Python 3.4 -3.10
++result = self.defaultTestResult()  # these 2 methods have no side effects
++if hasattr(self._outcome, 'errors'):
++self._feedErrorsToResult(result, self._outcome.errors)
+ else:
+ # For Python < 3.4
+ result = getattr(self, '_outcomeForDoCleanups', self._resultForDoCleanups)
diff -Nru silx-1.1.0+dfsg/debian/patches/series silx-1.1.0+dfsg/debian/patches/series
--- silx-1.1.0+dfsg/debian/patches/series	2022-11-04 15:54:24.0 +
+++ silx-1.1.0+dfsg/debian/patches/series	2023-01-26 22:54:36.0 +
@@ -5,3 +5,4 @@
 0005-removed-hdf5plugin-from-full-dependencies.patch
 0007-python3.10-fix.patch
 0007-do-not-install-scipy_spatial-COPYING.txt.patch
+0008-python3.11-fix.patch


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