Re: dh-r_20180403_source.changes REJECTED
Hi Andreas, 2018-04-03 17:05 GMT+02:00 Debian FTP Masters : > > Source-only uploads to NEW are not allowed. > > binary:pkg-r-autopkgtest is NEW. > Thanks for the upload of dh-r, unfortunately it was rejected because a new binary package is generated. The new binary package is pkg-r-autopkgtest which is design to improve the Testsuite: autopkgtest-pkg-r. Could you upload it again to NEW? Thanks. Best, Dylan -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#887682: r-cran-utf8: FTBFS on m68k: missing value where TRUE/FALSE needed
Hi Aaron, On Thu, 18 Jan 2018 21:33:47 -0500 "Aaron M. Ucko" wrote: > The build of r-cran-utf8 for m68k (admittedly not a release > architecture) failed: > > Error in if (any(i)) x[i] <- paste0(x[i], "\n", indentString) : > missing value where TRUE/FALSE needed > ERROR: installing package indices failed > > This is the same mysterious error message as with r-cran-git2r, just > in a different context; there may well be a bug in R itself here. > > Could you please take a look? This package was built correctly for m68k on 2018-02-27 [1]. Can we close this bug? Best, Dylan [1] https://buildd.debian.org/status/logs.php?pkg=r-cran-utf8&arch=m68k -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#882555: r-cran-ddalpha: FTBFS on m68k: no boost::math::Rlog1p
Hi Aaron, On Thu, 23 Nov 2017 16:54:33 -0500 "Aaron M. Ucko" wrote: > The build of r-cran-ddalpha for m68k (admittedly not a release > architecture) failed: > > g++ -std=gnu++11 -I/usr/share/R/include -DNDEBUG > -I"/usr/lib/R/site-library/Rcpp/include"-fpic -g -O2 > -fdebug-prefix-map=/build/r-base-vkBOGA/r-base-3.4.2.20171120=. > -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time > -D_FORTIFY_SOURCE=2 -g -c Polynomial.cpp -o Polynomial.o > In file included from > /usr/lib/R/site-library/Rcpp/include/RcppCommon.h:72:0, >from /usr/lib/R/site-library/Rcpp/include/Rcpp.h:27, >from stdafx.h:27, >from Polynomial.cpp:14: > /usr/include/boost/math/special_functions/log1p.hpp: In static member > function 'static void boost::math::detail::log1p_initializer tag>::init::do_init(const mpl_::int_<64>&)': > /usr/share/R/include/Rmath.h:76:15: error: 'Rlog1p' is not a member of > 'boost::math' >#define log1p Rlog1p > ^ > /usr/share/R/include/Rmath.h:76:15: note: suggested alternative: 'log1p' > /usr/lib/R/etc/Makeconf:168: recipe for target 'Polynomial.o' failed > make[1]: *** [Polynomial.o] Error 1 > > Could you please take a look? This package was built correctly for m68k on 2018-03-23 [1]. Can we close this bug? Best, Dylan [1] https://buildd.debian.org/status/logs.php?pkg=r-cran-ddalpha&arch=m68k -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#887680: r-cran-git2r: FTBFS on m68k: missing value where TRUE/FALSE needed
Hi Aaron, On Thu, 18 Jan 2018 21:05:31 -0500 "Aaron M. Ucko" wrote: > The build of r-cran-git2r for m68k (admittedly not a release > architecture) failed: > > Error in if (nc[currentIndex] == 0L) upperBlockIndex <- c(upperBlockIndex, > : > missing value where TRUE/FALSE needed > ERROR: installing package DESCRIPTION failed for package 'git2r' > > Could you please take a look? > This package was built correctly for m68k on 2018-02-27 [1]. Can we close this bug? Best, Dylan [1] https://buildd.debian.org/status/logs.php?pkg=r-cran-git2r&arch=m68k -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#890451: Bug#891231: lintian: Improve r-data-without-readme-source by comparing r-data filenames to README.source contents
Hi Chris, 2018-02-23 17:22 GMT+01:00 Chris Lamb : >> To improve the check r-data-without-readme-source and to avoid unmaintained >> README.source, lintian could check if the filename of all .RData files from >> a package are referenced into the README.source. > > Good idea! > >> A simple example where it could be useful is: a new version of a package >> contains a new binary R data file, but if the maintainer does not update >> the README.source, lintian will no emits any tag whereas this binary is not >> properly described. > > Sounds like we want something a bit more machine-readable than README.source. > Is it legal to add fields to a DEP-5 debian/copyright for this? If not, > I wonder if a debian/source/rdata with some field (or similar) could work? I'm not sure if d/copyright could be a correct place for this, but d/source/rdata sounds nice. Anyway this should be discussed with the team (we still don't have a place for discussion #886854 excepted to spam Debian Med and Debian Science teams). We should also probably have a tool to generate (at least) a skeleton of this file (#890451 in CC) to avoid a manual editing :-). > An example from the R maintainers (especially including a violating case) > would be extremely useful. Let's wait and see what the team will decide before to go further. Best, Dylan -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#891080: Generate a skeleton of debian/upstream/metadata using upstream inst/CITATION
Package: dh-r Severity: wishlist Hi, dh-make-R (and dh-update-R) could generate (and update) a d/upstream/metadata file or at least a skeleton with relevant information from the upstream inst/CITATION file. Lintian will now emit an (experimental) tag when the metadata file is missing [1]. Best, Dylan [1] https://lintian.debian.org/tags/upstream-metadata-file-is-missing.html -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers
Bug#890451: Generate a skeleton of README.source about rda and rdata files
Package: dh-r Severity: wishlist Hi, dh-make-R (and dh-update-R) could generate (and update) a README.source file or at least a skeleton with relevant information for .rda (and *.Rda, *.rdata, *.Rdata, etc.) files, see [2] for more information. Andreas already wrote a shell script [2] to do this. Best, Dylan [1] https://lintian.debian.org/tags/r-data-without-readme-source.html [2] https://lists.debian.org/debian-science/2017/10/msg00070.html -- debian-science-maintainers mailing list debian-science-maintainers@lists.alioth.debian.org http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-science-maintainers