Re: [Dspace-tech] maven error

2015-03-06 Thread Lewatle Phaladi
Hi Tim, 

Inside my ~/.m2/ there is :

dspace@lcstest:~$ ls .m2/
repository/   settings.xml

The file /usr/lib/jvm/java-7-openjdk-amd64/lib/tools.jar is not existing on my 
test server I have only :

dspace@lcstest:~$ ls -l /usr/lib/jvm/java-7-openjdk-amd64/
bin/  docs/ jre/  man/

environment variable is set as follows:.
 JAVA_HOME=/usr/lib/jvm/java-7-openjdk-amd64

Regards,
Lewatle 


-Original Message-
From: Tim Donohue [mailto:tdono...@duraspace.org] 
Sent: 06 March 2015 04:16 PM
To: Lewatle Phaladi; dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] maven error

Hi Lewatle,

Interesting. I have a nearly identical setup (Ubuntu 14.04, OpenJDK 7, Maven 
3.0.5) and I'm not seeing this same behavior.

Does this file exist on your server? Is it publicly readable (mine is 644)?

/usr/lib/jvm/java-7-openjdk-amd64/lib/tools.jar

Do you have the JAVA_HOME environment variable set?

Essentially, the Maven command is trying to locate the tools.jar on your 
server, and it's trying to find it at JAVA_HOME/../lib/tools.jar. 
(This logic was added initially in DSpace 4.0 and is unchanged in DSpace 5)

For some reason it is working on my Ubuntu 14.04 server, but not on yours...so, 
I'm just trying to narrow down the cause of the issue here.

You also could try to run the following to ensure any prior maven builds are 
first cleaned out (in case that could be causing issues):

mvn -U clean package

(The -U tells Maven to also update its dependencies in your local ~/.m2/
repository)

- Tim

On 3/6/2015 2:17 AM, Lewatle Phaladi wrote:
 Hi Tim,

 I am running Ubuntu OS version  : Distributor ID: Ubuntu
   
 Description:Ubuntu 14.04.1 LTS
   
 Release:14.04
   
 Codename:   trusty


 Java version :  java version 1.7.0_75
   OpenJDK Runtime Environment (IcedTea 2.5.4) 
 (7u75-2.5.4-1~trusty1)
OpenJDK 64-Bit Server VM (build 
 24.75-b04, mixed mode)

 Maven : Apache Maven 3.0.5
Maven home: /usr/share/maven
Java version: 1.7.0_75, vendor: Oracle Corporation
Java home: /usr/lib/jvm/java-7-openjdk-amd64/jre
Default locale: en_ZA, platform encoding: UTF-8
OS name: linux, version: 3.13.0-46-generic, arch: 
 amd64, family: unix

 Ant : Apache Ant(TM) version 1.9.3 compiled on April 8 2014

 Tomcat version  : apache-tomcat-8.0.20 Database : PostgreSQL 9.3 
 database server

 Regards,
 Lewatle

 -Original Message-
 From: Tim Donohue [mailto:tdono...@duraspace.org]
 Sent: 05 March 2015 11:40 PM
 To: Lewatle Phaladi; dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] maven error

 Hi Lewatle,

 We likely need more information here on your environment. What OS are you 
 using?  What version of Java?

 The ${toolsjar} setting is supposed to be auto-determined by our Maven POM 
 based on your JAVA_HOME..and it's different based on your operating system.

 Here's the relevant part of the Maven POM which seems to be having issues:
 https://github.com/DSpace/DSpace/blob/master/pom.xml#L447

 - Tim

 On 3/4/2015 4:06 AM, Lewatle Phaladi wrote:
 Hi,

 I am getting the following error, any idea what am I doing wrongly

 dspace@lcstest:~/dspace-5.0-src-release$ mvn package

 [INFO] Scanning for projects...

 [ERROR] The build could not read 1 project - [Help 1]

 [ERROR]

 [ERROR]   The project org.dspace:dspace-parent:5.0
 (/home/dspace/dspace-5.0-src-release/pom.xml) has 1 error

 [ERROR]
 'build.plugins.plugin[org.apache.maven.plugins:maven-antrun-plugin].dependencies.dependency.systemPath'
 for com.sun:tools:jar must specify an absolute path but is 
 ${toolsjar} @ line 176, column 28

 [ERROR]

 [ERROR] To see the full stack trace of the errors, re-run Maven with 
 the -e switch.

 [ERROR] Re-run Maven using the -X switch to enable full debug logging.

 [ERROR]

 [ERROR] For more information about the errors and possible solutions, 
 please read the following articles:

 [ERROR] [Help 1]
 http://cwiki.apache.org/confluence/display/MAVEN/ProjectBuildingExcep
 t
 ion

 Regards,

 Lewatle

 This communication is intended for the addressee only. It is 
 confidential. If you have received this communication in error, 
 please notify us immediately and destroy the original message. You 
 may not copy or disseminate this communication without the permission 
 of the University. Only authorised signatories are competent to enter 
 into agreements on behalf of the University and recipients are thus 
 advised that the content of this message may not be legally binding 
 on the University and may contain the personal views and opinions of 
 the author, which are not necessarily the views and opinions of The 
 University of the 

Re: [Dspace-tech] maven error

2015-03-06 Thread Tim Donohue
Hi Lewatle,

Interesting. I have a nearly identical setup (Ubuntu 14.04, OpenJDK 7, 
Maven 3.0.5) and I'm not seeing this same behavior.

Does this file exist on your server? Is it publicly readable (mine is 644)?

/usr/lib/jvm/java-7-openjdk-amd64/lib/tools.jar

Do you have the JAVA_HOME environment variable set?

Essentially, the Maven command is trying to locate the tools.jar on 
your server, and it's trying to find it at JAVA_HOME/../lib/tools.jar. 
(This logic was added initially in DSpace 4.0 and is unchanged in DSpace 5)

For some reason it is working on my Ubuntu 14.04 server, but not on 
yours...so, I'm just trying to narrow down the cause of the issue here.

You also could try to run the following to ensure any prior maven builds 
are first cleaned out (in case that could be causing issues):

mvn -U clean package

(The -U tells Maven to also update its dependencies in your local ~/.m2/ 
repository)

- Tim

On 3/6/2015 2:17 AM, Lewatle Phaladi wrote:
 Hi Tim,

 I am running Ubuntu OS version  : Distributor ID: Ubuntu
   
 Description:Ubuntu 14.04.1 LTS
   
 Release:14.04
   
 Codename:   trusty


 Java version :  java version 1.7.0_75
   OpenJDK Runtime Environment (IcedTea 2.5.4) 
 (7u75-2.5.4-1~trusty1)
OpenJDK 64-Bit Server VM (build 24.75-b04, 
 mixed mode)

 Maven : Apache Maven 3.0.5
Maven home: /usr/share/maven
Java version: 1.7.0_75, vendor: Oracle Corporation
Java home: /usr/lib/jvm/java-7-openjdk-amd64/jre
Default locale: en_ZA, platform encoding: UTF-8
OS name: linux, version: 3.13.0-46-generic, arch: 
 amd64, family: unix

 Ant : Apache Ant(TM) version 1.9.3 compiled on April 8 2014

 Tomcat version  : apache-tomcat-8.0.20
 Database : PostgreSQL 9.3 database server

 Regards,
 Lewatle

 -Original Message-
 From: Tim Donohue [mailto:tdono...@duraspace.org]
 Sent: 05 March 2015 11:40 PM
 To: Lewatle Phaladi; dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] maven error

 Hi Lewatle,

 We likely need more information here on your environment. What OS are you 
 using?  What version of Java?

 The ${toolsjar} setting is supposed to be auto-determined by our Maven POM 
 based on your JAVA_HOME..and it's different based on your operating system.

 Here's the relevant part of the Maven POM which seems to be having issues:
 https://github.com/DSpace/DSpace/blob/master/pom.xml#L447

 - Tim

 On 3/4/2015 4:06 AM, Lewatle Phaladi wrote:
 Hi,

 I am getting the following error, any idea what am I doing wrongly

 dspace@lcstest:~/dspace-5.0-src-release$ mvn package

 [INFO] Scanning for projects...

 [ERROR] The build could not read 1 project - [Help 1]

 [ERROR]

 [ERROR]   The project org.dspace:dspace-parent:5.0
 (/home/dspace/dspace-5.0-src-release/pom.xml) has 1 error

 [ERROR]
 'build.plugins.plugin[org.apache.maven.plugins:maven-antrun-plugin].dependencies.dependency.systemPath'
 for com.sun:tools:jar must specify an absolute path but is ${toolsjar}
 @ line 176, column 28

 [ERROR]

 [ERROR] To see the full stack trace of the errors, re-run Maven with
 the -e switch.

 [ERROR] Re-run Maven using the -X switch to enable full debug logging.

 [ERROR]

 [ERROR] For more information about the errors and possible solutions,
 please read the following articles:

 [ERROR] [Help 1]
 http://cwiki.apache.org/confluence/display/MAVEN/ProjectBuildingExcept
 ion

 Regards,

 Lewatle

 This communication is intended for the addressee only. It is
 confidential. If you have received this communication in error, please
 notify us immediately and destroy the original message. You may not
 copy or disseminate this communication without the permission of the
 University. Only authorised signatories are competent to enter into
 agreements on behalf of the University and recipients are thus advised
 that the content of this message may not be legally binding on the
 University and may contain the personal views and opinions of the
 author, which are not necessarily the views and opinions of The
 University of the Witwatersrand, Johannesburg. All agreements between
 the University and outsiders are subject to South African Law unless
 the University agrees in writing to the contrary.





 --
  Dive into the World of Parallel Programming The Go Parallel
 Website, sponsored by Intel and developed in partnership with Slashdot
 Media, is your hub for all things parallel software development, from
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Re: [Dspace-tech] maven error

2015-03-06 Thread Hilton Gibson
Ok, Try to install the following:

sudo apt-get install default-jdk default-jre

Also see: http://wiki.lib.sun.ac.za/index.php/SUNScholar/Prepare_Ubuntu/S03

Cheers

hg

*Hilton Gibson*
Ubuntu Linux Systems Administrator
JS Gericke Library
Room 1025C
Stellenbosch University
Private Bag X5036
Stellenbosch
7599
South Africa

Tel: +27 21 808 4100 | Cell: +27 84 646 4758

On 6 March 2015 at 16:53, Lewatle Phaladi lewatle.phal...@wits.ac.za
wrote:

 Hi Tim,

 Inside my ~/.m2/ there is :

 dspace@lcstest:~$ ls .m2/
 repository/   settings.xml

 The file /usr/lib/jvm/java-7-openjdk-amd64/lib/tools.jar is not existing
 on my test server I have only :

 dspace@lcstest:~$ ls -l /usr/lib/jvm/java-7-openjdk-amd64/
 bin/  docs/ jre/  man/

 environment variable is set as follows:.
  JAVA_HOME=/usr/lib/jvm/java-7-openjdk-amd64

 Regards,
 Lewatle


 -Original Message-
 From: Tim Donohue [mailto:tdono...@duraspace.org]
 Sent: 06 March 2015 04:16 PM
 To: Lewatle Phaladi; dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] maven error

 Hi Lewatle,

 Interesting. I have a nearly identical setup (Ubuntu 14.04, OpenJDK 7,
 Maven 3.0.5) and I'm not seeing this same behavior.

 Does this file exist on your server? Is it publicly readable (mine is 644)?

 /usr/lib/jvm/java-7-openjdk-amd64/lib/tools.jar

 Do you have the JAVA_HOME environment variable set?

 Essentially, the Maven command is trying to locate the tools.jar on your
 server, and it's trying to find it at JAVA_HOME/../lib/tools.jar.
 (This logic was added initially in DSpace 4.0 and is unchanged in DSpace 5)

 For some reason it is working on my Ubuntu 14.04 server, but not on
 yours...so, I'm just trying to narrow down the cause of the issue here.

 You also could try to run the following to ensure any prior maven builds
 are first cleaned out (in case that could be causing issues):

 mvn -U clean package

 (The -U tells Maven to also update its dependencies in your local ~/.m2/
 repository)

 - Tim

 On 3/6/2015 2:17 AM, Lewatle Phaladi wrote:
  Hi Tim,
 
  I am running Ubuntu OS version  : Distributor ID: Ubuntu
 
  Description:Ubuntu 14.04.1 LTS
 
  Release:14.04
 
  Codename:   trusty
 
 
  Java version :  java version 1.7.0_75
OpenJDK Runtime Environment (IcedTea
 2.5.4) (7u75-2.5.4-1~trusty1)
 OpenJDK 64-Bit Server VM (build
  24.75-b04, mixed mode)
 
  Maven : Apache Maven 3.0.5
 Maven home: /usr/share/maven
 Java version: 1.7.0_75, vendor: Oracle Corporation
 Java home: /usr/lib/jvm/java-7-openjdk-amd64/jre
 Default locale: en_ZA, platform encoding: UTF-8
 OS name: linux, version: 3.13.0-46-generic, arch:
 amd64, family: unix
 
  Ant : Apache Ant(TM) version 1.9.3 compiled on April 8 2014
 
  Tomcat version  : apache-tomcat-8.0.20 Database : PostgreSQL 9.3
  database server
 
  Regards,
  Lewatle
 
  -Original Message-
  From: Tim Donohue [mailto:tdono...@duraspace.org]
  Sent: 05 March 2015 11:40 PM
  To: Lewatle Phaladi; dspace-tech@lists.sourceforge.net
  Subject: Re: [Dspace-tech] maven error
 
  Hi Lewatle,
 
  We likely need more information here on your environment. What OS are
 you using?  What version of Java?
 
  The ${toolsjar} setting is supposed to be auto-determined by our Maven
 POM based on your JAVA_HOME..and it's different based on your operating
 system.
 
  Here's the relevant part of the Maven POM which seems to be having
 issues:
  https://github.com/DSpace/DSpace/blob/master/pom.xml#L447
 
  - Tim
 
  On 3/4/2015 4:06 AM, Lewatle Phaladi wrote:
  Hi,
 
  I am getting the following error, any idea what am I doing wrongly
 
  dspace@lcstest:~/dspace-5.0-src-release$ mvn package
 
  [INFO] Scanning for projects...
 
  [ERROR] The build could not read 1 project - [Help 1]
 
  [ERROR]
 
  [ERROR]   The project org.dspace:dspace-parent:5.0
  (/home/dspace/dspace-5.0-src-release/pom.xml) has 1 error
 
  [ERROR]
 
 'build.plugins.plugin[org.apache.maven.plugins:maven-antrun-plugin].dependencies.dependency.systemPath'
  for com.sun:tools:jar must specify an absolute path but is
  ${toolsjar} @ line 176, column 28
 
  [ERROR]
 
  [ERROR] To see the full stack trace of the errors, re-run Maven with
  the -e switch.
 
  [ERROR] Re-run Maven using the -X switch to enable full debug logging.
 
  [ERROR]
 
  [ERROR] For more information about the errors and possible solutions,
  please read the following articles:
 
  [ERROR] [Help 1]
  http://cwiki.apache.org/confluence/display/MAVEN/ProjectBuildingExcep
  t
  ion
 
  Regards,
 
  Lewatle
 
  This communication is intended for the addressee only. It is
  confidential. If you have received this communication in error,
  please notify us immediately and destroy the original message. You
  may not copy or disseminate this communication without the permission
  of the University. Only authorised 

Re: [Dspace-tech] browse list with contains option not starts_with

2015-03-06 Thread Tim Donohue
Hi Pablo,

You can get to the same list of items in either the Search or the Browse 
interfaces. The Browse interface is more meant for known items, where 
we assume you likely know what you are looking for.  The Search 
interface is used for finding items where you know it contains (or 
should contain a particular word).

You can even search within a specific Collection (which sounds like what 
you are looking for). Simply browse to the Collection of Items, and put 
a search into the search box on that page.

I hope that helps.

- Tim

On 3/6/2015 1:33 AM, Pablo Buenaposada wrote:
 because I still want to show the full list of items, the only that I can't
 understand is why you have to search something knowing how it starts, that's
 not the general case, normally you know that contains some word but you
 don't know the first ones.



 --
 View this message in context: 
 http://dspace.2283337.n4.nabble.com/browse-list-with-contains-option-not-starts-with-tp4676815p4676915.html
 Sent from the DSpace - Tech mailing list archive at Nabble.com.

 --
 Dive into the World of Parallel Programming The Go Parallel Website, sponsored
 by Intel and developed in partnership with Slashdot Media, is your hub for all
 things parallel software development, from weekly thought leadership blogs to
 news, videos, case studies, tutorials and more. Take a look and join the
 conversation now. http://goparallel.sourceforge.net/
 ___
 DSpace-tech mailing list
 DSpace-tech@lists.sourceforge.net
 https://lists.sourceforge.net/lists/listinfo/dspace-tech
 List Etiquette: 
 https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette


--
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by Intel and developed in partnership with Slashdot Media, is your hub for all
things parallel software development, from weekly thought leadership blogs to
news, videos, case studies, tutorials and more. Take a look and join the 
conversation now. http://goparallel.sourceforge.net/
___
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DSpace-tech@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/dspace-tech
List Etiquette: https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette


Re: [Dspace-tech] maven error

2015-03-06 Thread Hilton Gibson
PS: Also see:
http://wiki.lib.sun.ac.za/index.php/SUNScholar/Prepare_Ubuntu/S08


*Hilton Gibson*
Ubuntu Linux Systems Administrator
JS Gericke Library
Room 1025C
Stellenbosch University
Private Bag X5036
Stellenbosch
7599
South Africa

Tel: +27 21 808 4100 | Cell: +27 84 646 4758

On 6 March 2015 at 16:53, Lewatle Phaladi lewatle.phal...@wits.ac.za
wrote:

 Hi Tim,

 Inside my ~/.m2/ there is :

 dspace@lcstest:~$ ls .m2/
 repository/   settings.xml

 The file /usr/lib/jvm/java-7-openjdk-amd64/lib/tools.jar is not existing
 on my test server I have only :

 dspace@lcstest:~$ ls -l /usr/lib/jvm/java-7-openjdk-amd64/
 bin/  docs/ jre/  man/

 environment variable is set as follows:.
  JAVA_HOME=/usr/lib/jvm/java-7-openjdk-amd64

 Regards,
 Lewatle


 -Original Message-
 From: Tim Donohue [mailto:tdono...@duraspace.org]
 Sent: 06 March 2015 04:16 PM
 To: Lewatle Phaladi; dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] maven error

 Hi Lewatle,

 Interesting. I have a nearly identical setup (Ubuntu 14.04, OpenJDK 7,
 Maven 3.0.5) and I'm not seeing this same behavior.

 Does this file exist on your server? Is it publicly readable (mine is 644)?

 /usr/lib/jvm/java-7-openjdk-amd64/lib/tools.jar

 Do you have the JAVA_HOME environment variable set?

 Essentially, the Maven command is trying to locate the tools.jar on your
 server, and it's trying to find it at JAVA_HOME/../lib/tools.jar.
 (This logic was added initially in DSpace 4.0 and is unchanged in DSpace 5)

 For some reason it is working on my Ubuntu 14.04 server, but not on
 yours...so, I'm just trying to narrow down the cause of the issue here.

 You also could try to run the following to ensure any prior maven builds
 are first cleaned out (in case that could be causing issues):

 mvn -U clean package

 (The -U tells Maven to also update its dependencies in your local ~/.m2/
 repository)

 - Tim

 On 3/6/2015 2:17 AM, Lewatle Phaladi wrote:
  Hi Tim,
 
  I am running Ubuntu OS version  : Distributor ID: Ubuntu
 
  Description:Ubuntu 14.04.1 LTS
 
  Release:14.04
 
  Codename:   trusty
 
 
  Java version :  java version 1.7.0_75
OpenJDK Runtime Environment (IcedTea
 2.5.4) (7u75-2.5.4-1~trusty1)
 OpenJDK 64-Bit Server VM (build
  24.75-b04, mixed mode)
 
  Maven : Apache Maven 3.0.5
 Maven home: /usr/share/maven
 Java version: 1.7.0_75, vendor: Oracle Corporation
 Java home: /usr/lib/jvm/java-7-openjdk-amd64/jre
 Default locale: en_ZA, platform encoding: UTF-8
 OS name: linux, version: 3.13.0-46-generic, arch:
 amd64, family: unix
 
  Ant : Apache Ant(TM) version 1.9.3 compiled on April 8 2014
 
  Tomcat version  : apache-tomcat-8.0.20 Database : PostgreSQL 9.3
  database server
 
  Regards,
  Lewatle
 
  -Original Message-
  From: Tim Donohue [mailto:tdono...@duraspace.org]
  Sent: 05 March 2015 11:40 PM
  To: Lewatle Phaladi; dspace-tech@lists.sourceforge.net
  Subject: Re: [Dspace-tech] maven error
 
  Hi Lewatle,
 
  We likely need more information here on your environment. What OS are
 you using?  What version of Java?
 
  The ${toolsjar} setting is supposed to be auto-determined by our Maven
 POM based on your JAVA_HOME..and it's different based on your operating
 system.
 
  Here's the relevant part of the Maven POM which seems to be having
 issues:
  https://github.com/DSpace/DSpace/blob/master/pom.xml#L447
 
  - Tim
 
  On 3/4/2015 4:06 AM, Lewatle Phaladi wrote:
  Hi,
 
  I am getting the following error, any idea what am I doing wrongly
 
  dspace@lcstest:~/dspace-5.0-src-release$ mvn package
 
  [INFO] Scanning for projects...
 
  [ERROR] The build could not read 1 project - [Help 1]
 
  [ERROR]
 
  [ERROR]   The project org.dspace:dspace-parent:5.0
  (/home/dspace/dspace-5.0-src-release/pom.xml) has 1 error
 
  [ERROR]
 
 'build.plugins.plugin[org.apache.maven.plugins:maven-antrun-plugin].dependencies.dependency.systemPath'
  for com.sun:tools:jar must specify an absolute path but is
  ${toolsjar} @ line 176, column 28
 
  [ERROR]
 
  [ERROR] To see the full stack trace of the errors, re-run Maven with
  the -e switch.
 
  [ERROR] Re-run Maven using the -X switch to enable full debug logging.
 
  [ERROR]
 
  [ERROR] For more information about the errors and possible solutions,
  please read the following articles:
 
  [ERROR] [Help 1]
  http://cwiki.apache.org/confluence/display/MAVEN/ProjectBuildingExcep
  t
  ion
 
  Regards,
 
  Lewatle
 
  This communication is intended for the addressee only. It is
  confidential. If you have received this communication in error,
  please notify us immediately and destroy the original message. You
  may not copy or disseminate this communication without the permission
  of the University. Only authorised signatories are competent to enter
  into agreements on behalf of the University and 

Re: [Dspace-tech] OAI-PMH data provider 2.0 not persistent?

2015-03-06 Thread Kristian Roberto Salcedo
Hi Ivan,

I might have overlooked something, but from your comments on 
https://jira.duraspace.org/browse/DS-2491 wouldnt it be meaningful
to do both your declaration change and Ondřej's suggestion in order to match 
both what is declared and what the documentation says about OAI and deleted 
items?

regards,
Kristian

-Original Message-
From: ivan.ma...@gmail.com [mailto:ivan.ma...@gmail.com] On Behalf Of
helix84
Sent: Thursday, March 05, 2015 3:46 PM
To: Kristian Roberto Salcedo
Cc: dspace-tech@lists.sourceforge.net; João Melo
Subject: Re: [Dspace-tech] OAI-PMH data provider 2.0 not persistent?

Hi Kristian,

I think you're right that the declared
deletedRecordpersistent/deletedRecord doesn't match how DSpace
behaves. I filed a Jira issue and created a pull request to change the declared
status to deletedRecordtransient/deletedRecord.

https://jira.duraspace.org/browse/DS-2491


Regards,
~~helix84

Compulsory reading: DSpace Mailing List Etiquette
https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette


On Thu, Mar 5, 2015 at 2:52 PM, Kristian Roberto Salcedo
k.r.salc...@ub.uio.no wrote:
 Hi all,

 In Dspace 4.2 we are currently seeing that our OAI feeds are not being
persistent as per these definitions when it comes to deleted (withdrawn)
items:

 http://www.openarchives.org/OAI/openarchivesprotocol.html#deletion
 https://wiki.duraspace.org/pages/viewpage.action?pageId=34640887#OAI-
P
 MHDataProvider2.0(Internals)-Deletions

 Withdrawn items do not get the header status=deleted as they should,
like in this example:


http://webservices.itcs.umich.edu/mediawiki/oaibp/index.php/Deleted_Re
 cord_Example_1

 Withdrawing an item is not reflected in the OAI entry in any way.

 --

 This is our Identify page at the moment:

 https://www.duo.uio.no/oai/request?verb=Identify

 --

 I believe we're doing everything right regarding config parameters and
maintenance of the solr oai index.

 The only place I can find a persistent-parameter is in this config file:
 /www/var/data/dspace/config/oaicat.properties
 which I thought was deprecated, but we still set it just to be sure:
 Identify.deletedRecord=persistent

 All other relevant config parameters are set in these two files as far as I 
 can
tell:

 /www/var/data/dspace/config/modules/oai.cfg
 /www/var/data/dspace/config/crosswalks/oai/description.xml

 We are running the oai import -o command nightly.

 --

 The only way we've found to remove withdrawn items from the OAI feed is
by running a complete re-indexing of the oai solr index:

 /www/var/data/dspace/bin/dspace oai import -c

 with a subsequent

 /www/var/data/dspace/bin/dspace oai clean-cache

 This removes a withdrawn item:

 https://www.duo.uio.no/handle/10852/42670

 completely from the feed:


https://www.duo.uio.no/oai/request?verb=GetRecordmetadataPrefix=oai
_d
 cidentifier=oai:localhost:10852/42670

 which is not what we want...

 --


 Is anyone else experiencing the same problem?

 Maybe I've missed something - If this actually works differently than we
expect or has been addressed in OAI 2.1, please let me know.


 regards,
 Kristian Salcedo
 Universitetet of Oslo Library
 Department of digital services


 --
  Dive into the World of Parallel Programming The Go Parallel
 Website, sponsored by Intel and developed in partnership with Slashdot
 Media, is your hub for all things parallel software development, from
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Re: [Dspace-tech] OAI-PMH data provider 2.0 not persistent?

2015-03-06 Thread helix84
Yes, that makes sense. Still, it needs a brief verification because
sometimes our understanding of a concept and its implementation may
differ.


On Fri, Mar 6, 2015 at 10:12 AM, Kristian Roberto Salcedo
k.r.salc...@ub.uio.no wrote:
 Hi Ivan,

 I might have overlooked something, but from your comments on 
 https://jira.duraspace.org/browse/DS-2491 wouldnt it be meaningful
 to do both your declaration change and Ondřej's suggestion in order to match 
 both what is declared and what the documentation says about OAI and deleted 
 items?

 regards,
 Kristian

-Original Message-
From: ivan.ma...@gmail.com [mailto:ivan.ma...@gmail.com] On Behalf Of
helix84
Sent: Thursday, March 05, 2015 3:46 PM
To: Kristian Roberto Salcedo
Cc: dspace-tech@lists.sourceforge.net; João Melo
Subject: Re: [Dspace-tech] OAI-PMH data provider 2.0 not persistent?

Hi Kristian,

I think you're right that the declared
deletedRecordpersistent/deletedRecord doesn't match how DSpace
behaves. I filed a Jira issue and created a pull request to change the 
declared
status to deletedRecordtransient/deletedRecord.

https://jira.duraspace.org/browse/DS-2491


Regards,
~~helix84

Compulsory reading: DSpace Mailing List Etiquette
https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette


On Thu, Mar 5, 2015 at 2:52 PM, Kristian Roberto Salcedo
k.r.salc...@ub.uio.no wrote:
 Hi all,

 In Dspace 4.2 we are currently seeing that our OAI feeds are not being
persistent as per these definitions when it comes to deleted (withdrawn)
items:

 http://www.openarchives.org/OAI/openarchivesprotocol.html#deletion
 https://wiki.duraspace.org/pages/viewpage.action?pageId=34640887#OAI-
P
 MHDataProvider2.0(Internals)-Deletions

 Withdrawn items do not get the header status=deleted as they should,
like in this example:


http://webservices.itcs.umich.edu/mediawiki/oaibp/index.php/Deleted_Re
 cord_Example_1

 Withdrawing an item is not reflected in the OAI entry in any way.

 --

 This is our Identify page at the moment:

 https://www.duo.uio.no/oai/request?verb=Identify

 --

 I believe we're doing everything right regarding config parameters and
maintenance of the solr oai index.

 The only place I can find a persistent-parameter is in this config file:
 /www/var/data/dspace/config/oaicat.properties
 which I thought was deprecated, but we still set it just to be sure:
 Identify.deletedRecord=persistent

 All other relevant config parameters are set in these two files as far as I 
 can
tell:

 /www/var/data/dspace/config/modules/oai.cfg
 /www/var/data/dspace/config/crosswalks/oai/description.xml

 We are running the oai import -o command nightly.

 --

 The only way we've found to remove withdrawn items from the OAI feed is
by running a complete re-indexing of the oai solr index:

 /www/var/data/dspace/bin/dspace oai import -c

 with a subsequent

 /www/var/data/dspace/bin/dspace oai clean-cache

 This removes a withdrawn item:

 https://www.duo.uio.no/handle/10852/42670

 completely from the feed:


https://www.duo.uio.no/oai/request?verb=GetRecordmetadataPrefix=oai
_d
 cidentifier=oai:localhost:10852/42670

 which is not what we want...

 --


 Is anyone else experiencing the same problem?

 Maybe I've missed something - If this actually works differently than we
expect or has been addressed in OAI 2.1, please let me know.


 regards,
 Kristian Salcedo
 Universitetet of Oslo Library
 Department of digital services


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[Dspace-tech] displaying full titles for pool tasks

2015-03-06 Thread Bran, Adela
Hello,

I am new to Dspace and I need to display the full title for the tasks in the 
pool. This seemed to be an easy task and I thought I can easily obtain this by 
making some changes in the Submissions class 
(org.dspace.app.xmlui.aspect.xmlworkflow.Submissions.java). More precisely by 
removing the ifs where the length of the displayTitle is checked. But it turned 
out that this doesn't work. I would like to mention that I have packaged and 
updated the code, but without any success.

Could anyone help me with this (or at least give me some hints)?  I would be 
very grateful for any help.

Best,

Adela


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Re: [Dspace-tech] maven error

2015-03-06 Thread Tim Donohue
Hi Lewatle,

Aha, there's the issue then.

It looks like you only installed the JRE.  DSpace requires the JDK as 
noted in the Installation docs:

https://wiki.duraspace.org/display/DSDOC5x/Installing+DSpace#InstallingDSpace-OracleJavaJDK7orOpenJDK7

So, you need to install the *full* JDK:

sudo apt-get install openjdk-7-jdk

(It's likely you just installed openjdk-7-jre previously, which 
doesn't include that /lib folder and the tools.jar)

After installing the full JDK, things should work properly.

- Tim


On 3/6/2015 8:53 AM, Lewatle Phaladi wrote:
 Hi Tim,

 Inside my ~/.m2/ there is :

 dspace@lcstest:~$ ls .m2/
 repository/   settings.xml

 The file /usr/lib/jvm/java-7-openjdk-amd64/lib/tools.jar is not existing on 
 my test server I have only :

 dspace@lcstest:~$ ls -l /usr/lib/jvm/java-7-openjdk-amd64/
 bin/  docs/ jre/  man/

 environment variable is set as follows:.
   JAVA_HOME=/usr/lib/jvm/java-7-openjdk-amd64

 Regards,
 Lewatle


 -Original Message-
 From: Tim Donohue [mailto:tdono...@duraspace.org]
 Sent: 06 March 2015 04:16 PM
 To: Lewatle Phaladi; dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] maven error

 Hi Lewatle,

 Interesting. I have a nearly identical setup (Ubuntu 14.04, OpenJDK 7, Maven 
 3.0.5) and I'm not seeing this same behavior.

 Does this file exist on your server? Is it publicly readable (mine is 644)?

 /usr/lib/jvm/java-7-openjdk-amd64/lib/tools.jar

 Do you have the JAVA_HOME environment variable set?

 Essentially, the Maven command is trying to locate the tools.jar on your 
 server, and it's trying to find it at JAVA_HOME/../lib/tools.jar.
 (This logic was added initially in DSpace 4.0 and is unchanged in DSpace 5)

 For some reason it is working on my Ubuntu 14.04 server, but not on 
 yours...so, I'm just trying to narrow down the cause of the issue here.

 You also could try to run the following to ensure any prior maven builds are 
 first cleaned out (in case that could be causing issues):

 mvn -U clean package

 (The -U tells Maven to also update its dependencies in your local ~/.m2/
 repository)

 - Tim

 On 3/6/2015 2:17 AM, Lewatle Phaladi wrote:
 Hi Tim,

 I am running Ubuntu OS version  : Distributor ID: Ubuntu

 Description:Ubuntu 14.04.1 LTS

 Release:14.04

 Codename:   trusty


 Java version :  java version 1.7.0_75
OpenJDK Runtime Environment (IcedTea 2.5.4) 
 (7u75-2.5.4-1~trusty1)
 OpenJDK 64-Bit Server VM (build
 24.75-b04, mixed mode)

 Maven : Apache Maven 3.0.5
 Maven home: /usr/share/maven
 Java version: 1.7.0_75, vendor: Oracle Corporation
 Java home: /usr/lib/jvm/java-7-openjdk-amd64/jre
 Default locale: en_ZA, platform encoding: UTF-8
 OS name: linux, version: 3.13.0-46-generic, arch: 
 amd64, family: unix

 Ant : Apache Ant(TM) version 1.9.3 compiled on April 8 2014

 Tomcat version  : apache-tomcat-8.0.20 Database : PostgreSQL 9.3
 database server

 Regards,
 Lewatle

 -Original Message-
 From: Tim Donohue [mailto:tdono...@duraspace.org]
 Sent: 05 March 2015 11:40 PM
 To: Lewatle Phaladi; dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] maven error

 Hi Lewatle,

 We likely need more information here on your environment. What OS are you 
 using?  What version of Java?

 The ${toolsjar} setting is supposed to be auto-determined by our Maven POM 
 based on your JAVA_HOME..and it's different based on your operating system.

 Here's the relevant part of the Maven POM which seems to be having issues:
 https://github.com/DSpace/DSpace/blob/master/pom.xml#L447

 - Tim

 On 3/4/2015 4:06 AM, Lewatle Phaladi wrote:
 Hi,

 I am getting the following error, any idea what am I doing wrongly

 dspace@lcstest:~/dspace-5.0-src-release$ mvn package

 [INFO] Scanning for projects...

 [ERROR] The build could not read 1 project - [Help 1]

 [ERROR]

 [ERROR]   The project org.dspace:dspace-parent:5.0
 (/home/dspace/dspace-5.0-src-release/pom.xml) has 1 error

 [ERROR]
 'build.plugins.plugin[org.apache.maven.plugins:maven-antrun-plugin].dependencies.dependency.systemPath'
 for com.sun:tools:jar must specify an absolute path but is
 ${toolsjar} @ line 176, column 28

 [ERROR]

 [ERROR] To see the full stack trace of the errors, re-run Maven with
 the -e switch.

 [ERROR] Re-run Maven using the -X switch to enable full debug logging.

 [ERROR]

 [ERROR] For more information about the errors and possible solutions,
 please read the following articles:

 [ERROR] [Help 1]
 http://cwiki.apache.org/confluence/display/MAVEN/ProjectBuildingExcep
 t
 ion

 Regards,

 Lewatle

 This communication is intended for the addressee only. 

Re: [Dspace-tech] Batch data change

2015-03-06 Thread Nason Bimbe
Hi Hakim,
You can also use Dspace batch metadata  editing facility, see the
instructions at
https://wiki.duraspace.org/display/DSDOC4x/Batch+Metadata+Editing

Nason

On 6 March 2015 at 08:47, Hilton Gibson hilton.gib...@gmail.com wrote:

 Hi Hakan

 Perahsp this will help:
 http://wiki.lib.sun.ac.za/index.php/SUNScholar/SQL_Tips

 Cheers

 hg

 *Hilton Gibson*
 Ubuntu Linux Systems Administrator
 JS Gericke Library
 Room 1025C
 Stellenbosch University
 Private Bag X5036
 Stellenbosch
 7599
 South Africa

 Tel: +27 21 808 4100 | Cell: +27 84 646 4758

 On 4 March 2015 at 16:36, Hakan Yanaz hakan.ya...@ozyegin.edu.tr wrote:

 Hi,

 I want to change document type of all items inserted as Article to
 article.

 I do some research about that and the result is :

 in Postgresql, pgAdmin interface:

 The metadata_field_id of type field is 66 in
 metadatafieldregistry table.

 I can listed all Articles from metadatavalue table where
 metadata_field_id = 66 and text_value = Article

 If I change all text_value fields to article which I can listed like
 above, all things is that?

 Thanks for any advice.

 Best Regards

 Hakan Yanaz


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[Dspace-tech] Open Repositories 2015 Developer Track : Submission deadline Friday 13th March

2015-03-06 Thread KNOWLES Claire
--- Apologies for cross posting ---

JUST ONE WEEK LEFT TO SUBMIT YOUR IDEAS

Open Repositories 2015 DEVELOPER TRACK
June 8-11, 2015, Indianapolis, Indiana, http://www.or2015.net
*** Deadline 13th March 2015 ***

Cool Tools, Daring Demos and Fab Features

The OR2015 developer track presents an opportunity to share the latest
developments across the technical community. We will be running informal
sessions of presentations and demonstrations showcasing community
expertise and progress:

- What cool development tools, frameworks, languages and technologies
could you not get on without?

- Is there a particular technique or process that you find apt for solving
particular day-to-day repository problems?  Demonstrate it to the
community.  Extra credit for command-line shenanigans and live debugging.

- What new features (however small) have you added to your organisation¹s
repository?  What technologies were used and how did you arrive at your
solution?

Presentations will be flexibly timed (5 to 20 minutes). Live demos, code
repositories, ssh, hacking and audience participation are encouraged.

Submissions should take the form of a title and short paragraph detailing
what will be shared with the community (including the specific platform
and/or technologies you will be showcasing). Please also give an estimate
of the duration of your demonstration.

Submit your proposal here: https://www.conftool.com/or2015/  by March 13,
2015


** Ideas Challenge **

The Developer Challenge this year has been replaced by the more inclusive
IDEAS CHALLENGE. We would like to encourage teams to form before and
during the conference to propose an innovative solution to a real-world
problem that repository users currently face.  Each team should include
members from both the developer and user community, and represent more
than one institution.

Teams¹ ideas will be presented to the conference and prizes will be
awarded based on the nature of the problem, the quality of the solution
and the make-up of the team. Find out more at
http://www.or2015.net/ideas-challenge/

Please contact the Developer Track Co-Chairs, Adam Field and Claire
Knowles at af05v[AT]ecs.soton.ac.uk and claire.knowles[AT]ed.ac.uk for
further information.

Adam Field and Claire Knowles
Developer Track Co-Chairs


-- 
The University of Edinburgh is a charitable body, registered in
Scotland, with registration number SC005336.


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Re: [Dspace-tech] displaying full titles for pool tasks

2015-03-06 Thread helix84
On Fri, Mar 6, 2015 at 4:55 PM, Bran, Adela adela.b...@gesis.org wrote:
 by making some changes in the Submissions class
 (org.dspace.app.xmlui.aspect.xmlworkflow.Submissions.java). More precisely

Are you sure you're using XMLWorkflow? This is an optional module that
has to be enabled.
Check out these classes:

dspace-xmlui/src/main/java/org/dspace/app/xmlui/aspect/submission/Submissions.java
dspace-xmlui/src/main/java/org/dspace/app/xmlui/aspect/workflow/Submissions.java
dspace-xmlui/src/main/java/org/dspace/app/xmlui/aspect/xmlworkflow/Submissions.java


Regards,
~~helix84

Compulsory reading: DSpace Mailing List Etiquette
https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette

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Re: [Dspace-tech] install error for upstream/master

2015-03-06 Thread Monika C. Mevenkamp
That was it - an indirect dependency. The older servlet jar vanished after 
removing 
-dependency
-groupIdcom.google.oauth-client/groupId
-artifactIdgoogle-oauth-client-jetty/artifactId
-/dependency
from dspace-api.pom.xml 

mvn is still somewhat mysterious to me.  make on steroids with so many options 
it makes your head spin. I have seen the tutorials that explain how to compile 
HelloWorld.java. But those are not very helpful when dealing with poms 
referring to poms.  Best way to search for apps / jars/ version … mvm just 
some packages .. analyzing an issue 

In short : does anybody have a favorite tutorial / book to recommend ? 

Monika



Monika Mevenkamp
phone: 609-258-4161
Lewis Library,Washington Road and Ivy Lane, Princeton University, Princeton, NJ 
08544


 On Mar 5, 2015, at 9:16 AM, Mark H. Wood mw...@iupui.edu wrote:
 
 On Wed, Mar 04, 2015 at 07:34:44PM +, Monika C. Mevenkamp wrote:
 Ah - Yikes - Thanks
 
 It compiles now   after I changed the dependencies to rely on  
 artifactIdjavax.servlet-api/artifactId
 Unfortunately this had to be done in all sorts of pom.xml files
 
 BUT
 
 after the compile I still find WEB-INF/lib/servlet-api-2.5-20081211.jar in 
 webapps/*/WEB-INF/lib directories
 
 when I do
 ant update
 rm $DSPACE_HOME/webapps/jspui/WEB-INF/lib/*servlet*
 then restart tomcat and localhost:8080/jspui comes up fine
 
 My reading of the output of 'mvn dependency:tree' suggests that this
 is org.mortbay.jetty:servlet-api, pulled in transitively due to the
 dependency on org.mortbay.jetty.jetty by
 com.google.oauth-client-jetty, which for some reason is a dependency
 of dspace-api.  I wonder what happens when we exclude
 o.m.j:servlet-api?
 
 It looks to me as though at least oauth-client-jetty, and perhaps
 others, should be in scopetest/scope.  That's probably a better fix.
 
 -- 
 Mark H. Wood
 Lead Technology Analyst
 
 University Library
 Indiana University - Purdue University Indianapolis
 755 W. Michigan Street
 Indianapolis, IN 46202
 317-274-0749
 www.ulib.iupui.edu
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Re: [Dspace-tech] maven error

2015-03-06 Thread Lewatle Phaladi
Hi Tim, 

I am running Ubuntu OS version  : Distributor ID: Ubuntu
 
Description:Ubuntu 14.04.1 LTS
 Release:   
 14.04
 Codename:  
 trusty


Java version :  java version 1.7.0_75
 OpenJDK Runtime Environment (IcedTea 2.5.4) 
(7u75-2.5.4-1~trusty1)
  OpenJDK 64-Bit Server VM (build 24.75-b04, mixed 
mode)

Maven : Apache Maven 3.0.5
  Maven home: /usr/share/maven
  Java version: 1.7.0_75, vendor: Oracle Corporation
  Java home: /usr/lib/jvm/java-7-openjdk-amd64/jre
  Default locale: en_ZA, platform encoding: UTF-8
  OS name: linux, version: 3.13.0-46-generic, arch: 
amd64, family: unix

Ant : Apache Ant(TM) version 1.9.3 compiled on April 8 2014

Tomcat version  : apache-tomcat-8.0.20
Database : PostgreSQL 9.3 database server

Regards,
Lewatle 

-Original Message-
From: Tim Donohue [mailto:tdono...@duraspace.org] 
Sent: 05 March 2015 11:40 PM
To: Lewatle Phaladi; dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] maven error

Hi Lewatle,

We likely need more information here on your environment. What OS are you 
using?  What version of Java?

The ${toolsjar} setting is supposed to be auto-determined by our Maven POM 
based on your JAVA_HOME..and it's different based on your operating system.

Here's the relevant part of the Maven POM which seems to be having issues:
https://github.com/DSpace/DSpace/blob/master/pom.xml#L447

- Tim

On 3/4/2015 4:06 AM, Lewatle Phaladi wrote:
 Hi,

 I am getting the following error, any idea what am I doing wrongly

 dspace@lcstest:~/dspace-5.0-src-release$ mvn package

 [INFO] Scanning for projects...

 [ERROR] The build could not read 1 project - [Help 1]

 [ERROR]

 [ERROR]   The project org.dspace:dspace-parent:5.0
 (/home/dspace/dspace-5.0-src-release/pom.xml) has 1 error

 [ERROR]
 'build.plugins.plugin[org.apache.maven.plugins:maven-antrun-plugin].dependencies.dependency.systemPath'
 for com.sun:tools:jar must specify an absolute path but is ${toolsjar} 
 @ line 176, column 28

 [ERROR]

 [ERROR] To see the full stack trace of the errors, re-run Maven with 
 the -e switch.

 [ERROR] Re-run Maven using the -X switch to enable full debug logging.

 [ERROR]

 [ERROR] For more information about the errors and possible solutions, 
 please read the following articles:

 [ERROR] [Help 1]
 http://cwiki.apache.org/confluence/display/MAVEN/ProjectBuildingExcept
 ion

 Regards,

 Lewatle

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Re: [Dspace-tech] Batch data change

2015-03-06 Thread Hilton Gibson
Hi Hakan

Perahsp this will help:
http://wiki.lib.sun.ac.za/index.php/SUNScholar/SQL_Tips

Cheers

hg

*Hilton Gibson*
Ubuntu Linux Systems Administrator
JS Gericke Library
Room 1025C
Stellenbosch University
Private Bag X5036
Stellenbosch
7599
South Africa

Tel: +27 21 808 4100 | Cell: +27 84 646 4758

On 4 March 2015 at 16:36, Hakan Yanaz hakan.ya...@ozyegin.edu.tr wrote:

 Hi,

 I want to change document type of all items inserted as Article to
 article.

 I do some research about that and the result is :

 in Postgresql, pgAdmin interface:

 The metadata_field_id of type field is 66 in metadatafieldregistry
 table.

 I can listed all Articles from metadatavalue table where
 metadata_field_id = 66 and text_value = Article

 If I change all text_value fields to article which I can listed like
 above, all things is that?

 Thanks for any advice.

 Best Regards

 Hakan Yanaz


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