Re: [O] [BUG] superscripts exported as subscripts by ox-ascii

[Achim Gratz]

Nick Dokos  gmail.com> writes:
> 
> I pushed the obvious fix for this to master.
> 

As a bugfix, this should have gone to maint and then merged into master. 
Now you'll need to cherry-pick it onto maint and get a duplicate commit.

Regards,
Achim.

Re: [O] Confused about list indentation

[Guido Van Hoecke]

Hi, 

Leonard Avery Randall  writes:

> Guido Van Hoecke wrote:
>
>> I am a bit confused about indentation in the example at node
>> '2.7 Plain Lists' in the Org info file:
>> 
>> [quote]
>> ** Lord of the Rings
>>My favorite scenes are (in this order)
>>1. The attack of the Rohirrim
>>2. Eowyn's fight with the witch king
>>   + this was already my favorite scene in the book
>>   + I really like Miranda Otto.
>>3. Peter Jackson being shot by Legolas
>>   - on DVD only
>>   He makes a really funny face when it happens.
>>But in the end, no individual scenes matter but the film as a whole.
>>Important actors in this film are:
>>- Elijah Wood :: He plays Frodo
>>- Sean Austin :: He plays Sam, Frodo's friend.  I still remember
>>  him very well from his role as Mikey Walsh in The Goonies.
>> [unquote]
>> 
>>
>> The last line aligns the word 'him' directly under 'Sean', which
>> is what I expect.
>> 
>> The 'He makes a really...' sentence is aligned under the list hyphen,
>> rather than under 'on DVD...'
>> 
>> Is this not inconsistent? I'd expect it to be indented two extra
>> positions to the right, similar to the last sentence.
>
> I believe the reason for the disparity is that 'He makes a really
> funny face', is supposed to be associated with 'Peter Jackson being
> shot by legolas' rather than 'on DVD only'. I believe the example is
> supposed to show that list items can contain both subsidiary lists and
> whole paragraphs. If the paragraph were supposed to be associated with
> the lower level list item it would be indented as you expected. 

How does org decide that 'He makes a really...' is not associated with
the current list item? What keystrokes are required to produce this
alignment or the one with the extra indentation?


Guido

--
In these matters the only certainty is that there is nothing certain.
-- Pliny the Elder

Re: [O] [BUG] Symbol's function definition is void: function-put

[Achim Gratz]

Sharon Kimble  skimble.plus.com> writes:
> I've just tried to start emacs 24.3.90.1 without success, and it
> showed
> --8<---cut here---start->8---
> Warning (initialization): An error occurred while loading
`/home/boudiccas/.emacs':

If you're in a pinch, just replace all occurences of "function-put" with "put".

> .emacs.d/elpa/org-20140505/

Well, those two lines are not in the Org ELPA package that you supposedly
have installed and there's no trace of any "function-put" anywhere I can
find in the source.  I suspect that you installed the ELPA package either
with a much older Emacs version (certainly not any 24.x one) or that you had
something in your init scripts that defines function-put at the time of
installation.
 You need to remove the ELPA package, then install it anew from an Emacs
instance that doesn't have these initializations (i.e. start from "emacs -Q").


Regards,
Achim.

[O] [PATH] Customize org-annotate-file

[Daimrod]

Hi,

Here is a small patch for contrib/lisp/org-annotate-file.el.

This patch creates a customization group for org-annotate-file (child of
the org group) and convert defvars to defcustoms.

Okay to push?

>From ea5be445776f7d139f52b38306552e0012b47d0a Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Gr=C3=A9goire=20Jadi?= 
Date: Fri, 9 May 2014 14:58:59 +0900
Subject: [PATCH] contrib/lisp/org-annotate-file.el: Create a customization
 group and convert `defvar' customization variables to `defcustom'

* contrib/lisp/org-annotate-file.el (org-annotate-file): New customization
group.

(org-annotate-file-storage-file org-annotate-file-add-search
org-annotate-file-always-open): Convert `defvar' symbols to `defcustom' using the new group.
---
 contrib/lisp/org-annotate-file.el | 26 ++
 1 file changed, 18 insertions(+), 8 deletions(-)

diff --git a/contrib/lisp/org-annotate-file.el b/contrib/lisp/org-annotate-file.el
index 8fbb590..b8e8bd9 100644
--- a/contrib/lisp/org-annotate-file.el
+++ b/contrib/lisp/org-annotate-file.el
@@ -59,14 +59,24 @@
 
 (require 'org)
 
-(defvar org-annotate-file-storage-file "~/.org-annotate-file.org"
-  "File in which to keep annotations.")
-
-(defvar org-annotate-file-add-search nil
-  "If non-nil, add a link as a second level to the actual file location.")
-
-(defvar org-annotate-file-always-open t
-  "If non-nil, always expand the full tree when visiting the annotation file.")
+(defgroup org-annotate-file nil
+  "Org Annotate"
+  :group 'org)
+
+(defcustom org-annotate-file-storage-file "~/.org-annotate-file.org"
+  "File in which to keep annotations."
+  :group 'org-annotate-file
+  :type 'file)
+
+(defcustom org-annotate-file-add-search nil
+  "If non-nil, add a link as a second level to the actual file location."
+  :group 'org-annotate-file
+  :type 'boolean)
+
+(defcustom org-annotate-file-always-open t
+  "If non-nil, always expand the full tree when visiting the annotation file."
+  :group 'org-annotate-file
+  :type 'boolean)
 
 (defun org-annotate-file-ellipsify-desc (string &optional after)
   "Return shortened STRING with appended ellipsis.
-- 
1.8.0.2722.gc0242e5


-- 
Daimrod/Greg

[O] Bug: Literal Example does not work [7.9.3f (release_7.9.3f-17-g7524ef @ /usr/share/emacs/24.3/lisp/org/)]

[KURODA Hisao]

Remember to cover the basics, that is, what you expected to happen and
what in fact did happen.  You don't know how to make a good report?  See

 http://orgmode.org/manual/Feedback.html#Feedback

Your bug report will be posted to the Org-mode mailing list.


Hi,

A very simple literal example below seems not work 
with M-x org-export-as-html.

  #+BEGIN_SRC emacs-lisp
   (save-excursion  
  (goto-char (point-min)))
  #+END_SRC

The HTML output is class=example not emacs-lisp as follows.

  (save-excursion  
 (goto-char (point-min)))
  

It also reproducible on 8.2.6. But it works on org-7.8.11 as follows.

  (save-excursion  
 (goto-char (point-min)))
  


Emacs  : GNU Emacs 24.3.1 (x86_64-pc-linux-gnu, GTK+ Version 3.10.7)
 of 2014-03-08 on lamiak, modified by Debian
Package: Org-mode version 7.9.3f (release_7.9.3f-17-g7524ef @ 
/usr/share/emacs/24.3/lisp/org/)

current state:
==
(setq
 org-export-preprocess-before-selecting-backend-code-hook 
'(org-beamer-select-beamer-code)
 org-tab-first-hook '(org-hide-block-toggle-maybe
  org-src-native-tab-command-maybe
  org-babel-hide-result-toggle-maybe
  org-babel-header-arg-expand)
 org-speed-command-hook '(org-speed-command-default-hook
  org-babel-speed-command-hook)
 org-occur-hook '(org-first-headline-recenter)
 org-metaup-hook '(org-babel-load-in-session-maybe)
 org-export-preprocess-before-normalizing-links-hook 
'(org-remove-file-link-modifiers)
 org-confirm-shell-link-function 'yes-or-no-p
 org-export-latex-final-hook '(org-beamer-amend-header org-beamer-fix-toc
   org-beamer-auto-fragile-frames
   org-beamer-place-default-actions-for-lists)
 org-export-latex-after-initial-vars-hook '(org-beamer-after-initial-vars)
 org-after-todo-state-change-hook '(org-clock-out-if-current)
 org-src-mode-hook '(org-src-babel-configure-edit-buffer
 org-src-mode-configure-edit-buffer)
 org-agenda-before-write-hook '(org-agenda-add-entry-text)
 org-babel-pre-tangle-hook '(save-buffer)
 org-mode-hook '(#[nil "\300\301\302\303\304$\207"
   [org-add-hook change-major-mode-hook org-show-block-all
append local]
   5]
 #[nil "\300\301\302\303\304$\207"
   [org-add-hook change-major-mode-hook
org-babel-show-result-all append local]
   5]
 org-babel-result-hide-spec org-babel-hide-all-hashes)
 org-export-latex-default-packages-alist '(("AUTO" "inputenc" t)
   ("" "fixltx2e" nil)
   ("" "graphicx" t)
   ("" "longtable" nil)
   ("" "float" nil) ("" "wrapfig" nil)
   ("" "soul" t) ("" "textcomp" t)
   ("" "marvosym" t) ("" "wasysym" t)
   ("" "latexsym" t) ("" "amssymb" t)
   "\\tolerance=1000")
 org-ctrl-c-ctrl-c-hook '(org-babel-hash-at-point
  org-babel-execute-safely-maybe)
 org-cycle-hook '(org-cycle-hide-archived-subtrees org-cycle-hide-drawers
  org-cycle-show-empty-lines
  org-optimize-window-after-visibility-change)
 org-export-latex-format-toc-function 'org-export-latex-format-toc-default
 org-export-blocks '((src org-babel-exp-src-block nil)
 (export-comment org-export-blocks-format-comment t)
 (ditaa org-export-blocks-format-ditaa nil)
 (dot org-export-blocks-format-dot nil))
 org-export-first-hook '(org-beamer-initialize-open-trackers)
 org-export-interblocks '((src org-babel-exp-non-block-elements))
 org-export-latex-hyperref-options-format ""
 org-confirm-elisp-link-function 'yes-or-no-p
 org-metadown-hook '(org-babel-pop-to-session-maybe)
 org-clock-out-hook '(org-clock-remove-empty-clock-drawer)
 org-export-latex-classes '(("jarticle" "\\documentclass[a4j]{jarticle}"
 ("\\section{%s}" . "\\section*{%s}")
 ("\\subsection{%s}" . "\\subsection*{%s}")
 ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
 ("\\paragraph{%s}" . "\\paragraph*{%s}")
 ("\\subparagraph{%s}" . "\\subparagraph*{%s}"))
("article" "\\documentclass[11pt]{article}"
 ("\\section{%s}" . "\\section*{%s}")
 ("\\subsection{%s}" . "\\subsection*{%s}")
 ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
 ("

[O] [BUG] Symbol's function definition is void: function-put

[Sharon Kimble]

I've just tried to start emacs 24.3.90.1 without success, and it
showed
--8<---cut here---start->8---
Warning (initialization): An error occurred while loading 
`/home/boudiccas/.emacs':

Symbol's function definition is void: function-put
--8<---cut here---end--->8---

I eventually tracked it down to lines 2248 and 2284 of "org-loaddefs.el"
this is line 2248
╭
│(function-put 'org-export-to-buffer 'lisp-indent-function '2)
╰
and this is line 2284
╭
│(function-put 'org-export-to-file 'lisp-indent-function '2)
╰

It always shows up in 24.3.90.1 and stops it from fully loading,
whereas in 24.4.50.x there is no problem.

This is the backtrace/debugger for it
--8<---cut here---start->8---
Debugger entered--Lisp error: (void-function function-put)
  (function-put (quote org-export-to-buffer) (quote lisp-indent-function) 
(quote 2))
  eval-buffer(# nil 
"/home/boudiccas/.emacs.d/elpa/org-20140505/org-loaddefs.el" nil t)  ; Reading 
at buffer position 84568
  
load-with-code-conversion("/home/boudiccas/.emacs.d/elpa/org-20140505/org-loaddefs.el"
 "/home/boudiccas/.emacs.d/elpa/org-20140505/org-loaddefs.el" t t)
  load("org-loaddefs.el" t t t)
  
byte-code("\300\301!\210\302\303!\210\302\304!\210\302\305!\210\306\307\310\211\211$\210\302\311!\210\302\312!\207"
 [make-variable-buffer-local org-table-formula-constants-local require calendar 
find-func format-spec load "org-loaddefs.el" t org-macs org-compat] 5)
  autoload-do-load((autoload "org" "Show the org-mode version in the echo 
area.\nWith prefix argument HERE, insert it at point.\nWhen FULL is non-nil, 
use a verbose version string.\nWhen MESSAGE is non-nil, display a message with 
the version.\n\n(fn &optional HERE FULL MESSAGE)" t nil) org-version)
  command-execute(org-version record)
  execute-extended-command(nil "org-version")
  call-interactively(execute-extended-command nil nil)
  command-execute(execute-extended-command)
--8<---cut here---end--->8---

This is with Org-mode version 8.2.6 (8.2.6-14-g063c8b-elpa @ 
/home/boudiccas/.emacs.d/elpa/org-20140505/)

Sharon.
-- 
A taste of linux = http://www.sharons.org.uk
my git repo = https://bitbucket.org/boudiccas/dots
TGmeds = http://www.tgmeds.org.uk
Debian testing, Fluxbox 1.3.5, emacs 24.4.50.21


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Description: PGP signature

Re: [O] [PATCH] Fix error prone babel table output format detection

[Ian Kelling]

Eric Schulte  writes:

> This looks good to me.  Could you reformat the patch with
>
>   git format-patch
>
> and attach the results (this will be easier to apply).


Done. I was actually following the instructions in man git-format-patch by
not attaching it before, but I will avoid that in future.

> Also, this patch
> is small enough to apply without any sort of copyright attribution, but
> if you think you might make larger contributions in the future, please
> look over the org contribution instructions [1].>

I've completed emacs fsf copyright assignment. I also have another patch
that has been on the mailing list for about 2 weeks or so waiting for a reply.

>From 4122d20f1253c2cbf5e73070ea00665bbc802275 Mon Sep 17 00:00:00 2001
From: Ian Kelling 
Date: Wed, 30 Apr 2014 21:56:52 -0700
Subject: [PATCH] Fix error prone babel table output format detection

* lisp/ob-core.el: Test that all elements are in a list are lists or
'hline instead of just the first.

org-babel table output uses different formatting for a list of lists,
but detects it incorrectly causing an error. An example of a block
causing an error is an emacs lisp source block containing just 1 line:
'((1) 2)
---
 lisp/ob-core.el |6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/lisp/ob-core.el b/lisp/ob-core.el
index 1348f04..4ddafaf 100644
--- a/lisp/ob-core.el
+++ b/lisp/ob-core.el
@@ -2184,9 +2184,9 @@ code  the results are extracted in the syntax of the source
 		 ((funcall proper-list-p result)
 		  (goto-char beg)
 		  (insert (concat (orgtbl-to-orgtbl
-   (if (or (eq 'hline (car result))
-	   (and (listp (car result))
-		(listp (cdr (car result)
+   (if (org-every
+	(lambda (el) (or (listp el) (eq el 'hline)))
+	result)
    result (list result))
    '(:fmt (lambda (cell) (format "%s" cell "\n"))
 		  (goto-char beg) (when (org-at-table-p) (org-table-align)))
-- 
1.7.10.4

[O] (Bug)Open the attachment in the subheading in agenda view

[Kyutech]

I am wondering if I can open the attachment which is attached to the father
heading in agenda view.

I think it will be very convenient to open as the way above,

and I really do not want to attach the same file to all of the subheadings.

I have turned on the inheritance of the properties,

 but it seems like that the subheadings does not inherit the attachment
properties.

Is there anyway to solve this problems? Is it a bug?

Re: [O] [PATCH] Fix: Capture abort: (error: The mark is not set now, so there is no region)

[Alex Kosorukoff]

After I replaced my patch and merged Bastien's fix, I started seeing the
error though less frequently than before. It didn't occur in the template I
posted, but I started seeing it again in another template.

("w" "org-protocol tag" entry (file "~/org/bookmarks.org")
   "* %:description %(org-set-tags)\n  %i\n\n  %:link\n%?"
   :prepend t :empty-lines-after 1 :clock-in t :clock-resume t)

I switched back to my initial patch that was checking if the mark was set
before trying to access the region. This worked: the errors disappeared.
However, I couldn't understand why mark would be unset in the first place.
It turns out that this is a result of the function
org-capture-steal-local-variables that is copying mark-active variable from
another buffer. This results in an inconsistent state where mark is not set
and yet the variable mark-active is set. Emacs functions region-active-p
and use-region-p expect the state to be consistent and fail with this error
that they won't produce under normal circumstances. Here is the minimal
patch that fixes the root cause of this problem:

>From 3d84403964dec1ac55810883e4e8a812c3ff94fc Mon Sep 17 00:00:00 2001
From: Alex Kosorukoff 
Date: Thu, 8 May 2014 20:27:59 -0700
Subject: [PATCH] org-capture: better fix for error "The mark is not set
now, ..."

---
 lisp/org-capture.el |1 +
 1 files changed, 1 insertions(+), 0 deletions(-)

diff --git a/lisp/org-capture.el b/lisp/org-capture.el
index d57b9e0..3c62b1d 100644
--- a/lisp/org-capture.el
+++ b/lisp/org-capture.el
@@ -1590,6 +1590,7 @@ The template may still contain \"%?\" for cursor
positioning."
   (goto-char (point-min))
   (org-capture-steal-local-variables buffer)
   (setq buffer-file-name nil)
+  (setq mark-active nil)

   ;; %[] Insert contents of a file.
   (goto-char (point-min))
-- 
1.7.0.4





On Tue, Apr 29, 2014 at 4:05 AM, Bastien  wrote:

> Hi Alex,
>
> Alex Kosorukoff  writes:
>
> > I noticed a regression in the capture functionality after upgrading
> > org. Capture fails with error in subj
>
> fixed, thanks,
>
> --
>  Bastien
>

Re: [O] [BUG] superscripts exported as subscripts by ox-ascii

[Nick Dokos]

Suvayu Ali  writes:

> Hi,
>
> When exporting the following snippets, superscripts are exported as
> subscripts by the ascii exporter.
>
> Org src:
>
> - B⁺ → D(K_{s}ππ)K⁺, B → D(K_{s}KK)K⁺,
> - CPV in B^{±} → D(K_{s}K^{±}π^{∓})K^{±}, and B^{±} →
>   D(K_{s}K^{∓}π^{±})K^{±},
>
> Exported text:
>
> • B⁺ → D(K_{s}ππ)K⁺, B → D(K_{s}KK)K⁺,
> • CPV in B_{±} → D(K_{s}K_{±}π_{∓})K_{±}, and B_{±} →
>   D(K_{s}K_{∓}π_{±})K_{±},
>
> Unfortunately I noticed this after I sent the exported text to a bunch
> of my collaborators!  Thankfully we work for the same institute :).
>

I pushed the obvious fix for this to master.

-- 
Nick

[O] [PATCH] org-mime slightly out of date

[Eric Abrahamsen]

Hi,

org-mime still includes a call to `org-export-grab-title-from-buffer',
which doesn't exist any more. The attached patch does the same the
way org-export currently does it (I think).

Eric

>From c967afb70bd7c9039c09d7c7f22388e1eced30fa Mon Sep 17 00:00:00 2001
From: Eric Abrahamsen 
Date: Thu, 8 May 2014 22:32:01 +0800
Subject: [PATCH] Update org-mime to current export functions

* /contrib/lisp/org-mime.el (org-mime-send-buffer):

This function was using `org-export-grab-title-from-buffer', which no
longer exists.
---
 contrib/lisp/org-mime.el | 6 --
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/contrib/lisp/org-mime.el b/contrib/lisp/org-mime.el
index b0007ac..5f874d9 100644
--- a/contrib/lisp/org-mime.el
+++ b/contrib/lisp/org-mime.el
@@ -269,8 +269,10 @@ export that region, otherwise export the entire body."
 (defun org-mime-send-buffer (&optional fmt)
   (run-hooks 'org-mime-send-buffer-hook)
   (let* ((region-p (org-region-active-p))
-	 (subject (org-export-grab-title-from-buffer))
- (file (buffer-file-name (current-buffer)))
+	 (file (buffer-file-name (current-buffer)))
+	 (subject (if (not file) (buffer-name (buffer-base-buffer))
+		   (file-name-sans-extension
+		(file-name-nondirectory file
  (body-start (or (and region-p (region-beginning))
  (save-excursion (goto-char (point-min)
  (body-end (or (and region-p (region-end)) (point-max)))
-- 
1.9.2

Re: [O] Questions about mail, MIME, etc.

[Eric Abrahamsen]

Peter Davis  writes:

> On Thu, May 08, 2014 at 10:34:26PM +0800, Eric Abrahamsen wrote:
>> Peter Davis  writes:
>> 
>> Yeah I got that error too, a while ago, and your message prompted me to
>> look at it. It seems like org-mime is just a bit behind the state of
>> org-export, and fixing that one dead function link is enough to make it
>> work again. I've attached a patch.
>
> Excellent! That worked. Thank you!

Okay, I'll start a new thread and see if we can get the patch accepted.

>> 
>> Generating a message buffer is pretty much hard-coded into org-mime.
>> Once you're in that buffer, though, the (non-interactive) function
>> mml-generate-mime will return the fully encoded mime message as a
>> string -- you could save that to a file and do something else with it.
>> I'm not 100% confident that's the simplest way to do that.
>
> Ok, I was able to send the message through gnus, even though I don't 
> (normally) use it as a mail reader.
>
>> >  3) What I'd really like is a multipart/alternative message where
>> > one part is text/plain, and looks exactly like the emacs buffer
>> > display, and the other part is text/html, and
>> > looks like what org would export to html, complete with tables, 
>> > images, etc.
>> 
>> As far as I know, that's exactly what org-mime does!
>
> Almost. It looks like org-mime puts the actual contents of the buffer
> into the text/plain part, including links, etc. that would normally be
> hidden on display. I think it would be
> more useful to make the text/plain part contain what would be output from 
> exporting to text. But maybe that's just my preference.

org-mime assumes a native 'org export format for the plain text part of
the email. That looks like it's hard-coded in `org-mime-compose',
unfortunately.

Eric

Re: [O] crossing out tasks

[Sharon Kimble]

Ian Barton  writes:

> On 08/05/14 11:12, Sharon Kimble wrote:
>> This is so simple but I can't find a solution. If I have a list of
>> tasks with + in front, when done I can put a + at the end which
>> crosses them out, making it very easy to see what I have left to
>> do. Except, sometimes the preceding task inherits the crossing out
>> too, even though it does not have a + at the end, so how can I stop
>> the inheritance please?
>>
>> Sharon.
>
> I seem to remember that Carsten doesn't like strike through
> faces. Maybe it's his secret plot to stop people using them:)
>
> On a more constructive note. Why don't you just make them TODO's and
> then mark them DONE in the usual way. You should be able to customize
> the DONE face to a strike through one.
>
I've just converted them from TODOS, and this task-list seemed a
simpler and easier idea, but I'll try check-boxes like Nick
suggested. 

Sharon.
-- 
A taste of linux = http://www.sharons.org.uk
my git repo = https://bitbucket.org/boudiccas/dots
TGmeds = http://www.tgmeds.org.uk
Debian testing, Fluxbox 1.3.5, emacs 24.4.50.21


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Re: [O] Using KOMA and Memoir?

[Martin Schöön]

Tonight I have been a bit adventurous and I have seen some success.
But before that I tried to understand what lading ox-latex meant and how
to do it. I found something here: http://orgmode.org/worg/exporters/koma
-letter-export.html
and tried it with no luck. Then I thought, org + LaTeX and exporting to PDFworks
just fine as long as I stay away from trying KOMA so ox-latex must work...

Next I looked up org-latex.el in the directory org-mode version 8.2.5h
lives in
my computer and started to study the code. I soon found were
org-latex-classes
are defined and decided to add the code Eric has supplied.

Now komaarticle works!

This indicates to me that ox-latex has loaded just fine all the time and it
is indeed
the one from version 8.2.5h that loads.

So why didn't it work the way I was told to do it?
How much of my .emacs is needed to figure it out, all? Here are the parts I
think
are relevant. First the very beginning of my .emacs (comments are mixed
Swedish
and English):

;;; Martins nya .emacs
;;;
;;; (Re)creation started 130819
;;; Most material comes from .emacs.statler
;;;
;; Colours and fonts and what not ;;;
;; Added 2011-11-04
;; path till 'egna' lisp-filer
(add-to-list 'load-path "~/.emacs.d/my_lisp/")
;; (require 'color-theme-solarized)
;; Added 2011-11-18
;; Egenvald defaultfont
;;(set-default-font "-gohu-gohufont-medium-*-*-*-11-*-*-*-*-*-*-*")
;;(modify-frame-parameters nil '((wait-for-wm . nil)))
;; british spelling
(setq ispell-dictionary "british")

; To shift focus between frames ;;
;; Added 2013-08-19
;; from http://www.emacswiki.org/emacs/FrameMove
;; framemove.el is placed in my_lisp
;;
;;(require 'framemove)
;;(windmove-default-keybindings)  ;; default prefix is Meta
;;(setq framemove-hook-into-windmove t)


;; Org-mode stuff 
;; Added 2014-03-02
;; to make emacs find org-mode other than default:
(add-to-list 'load-path "/home/martin/Program/Org-mode/org-8.2.5h/lisp")
(add-to-list 'load-path "/home/martin/Program/Org-mode/org-8.2.5h/contrib
/lisp")
(require 'org)
;;
;; Added 2014-04-08
;; Trying to force ox-latex as per http://orgmode.org/worg/exporters/koma
-letter-export.html
;;
;(eval-after-load 'ox-latex
;  '(add-to-list 'org-latex-packages-alist '("AUTO" "babel" t) t))
;;

After this follows many lines of tweaks most of which is copied from
BerntHansen and
none of it related to bable or exporting. This is the stuff I have been
using for a while
and use every day at work.

Then near the end LaTeX and Eric's code (commented out):

;;;
;;;
;;; LaTeX
;;;
(org-babel-do-load-languages
 'org-babel-load-languages
 '((latex . t)))
;;;
;;; KOMA
;;;
;(add-to-list 'org-latex-classes
;   '("komaarticle" "\\documentclass{scrartcl}"
; ("\\section{%s}" . "\\section*{%s}")
; ("\\subsection{%s}" . "\\subsection*{%s}")
; ("\\subsubsection{%s}" . "\\subsubsection*{%s}")
; ("\\paragraph{%s}" . "\\paragraph*{%s}")
; ("\\subparagraph{%s}" . "\\subparagraph*{%s}")))
;;;

So much for Thursday evening.

-- 
Martin Schöön

http://hem.bredband.net/b262106/index.html

Re: [O] Adding export option for babel language

[Ken Mankoff]

I figured it out:

(setq org-latex-custom-lang-environments
 '((python "pyconsole")))

And of course \usepackage{pythontex} somewhere.

This is really nice. Now the Org buffer behaves as before, but the
exported LaTeX has the python code appear as if it were run right there
in an interactive session. I set ":export code" so the Org results are
not shown in the PDF, and PythonTeX re-generates the results and puts
them inline!

  -k.


On 2014-05-08 at 15:53, Ken Mankoff  wrote:
> Hi Chuck,
>
> On 2014-05-08 at 12:17, Charles Berry  wrote:
>>> I'd like the python code blocks to behave just as they do now, but if I
>>> have set (setq org-latex-listings 'pythontex) instead of (setq
>>> org-latex-listings 'minted), then instead of wrapping python code blocks
>>> with:
>>> 
>>> \begin{minted}[]{python}
>>> x+2
>>> print x
>>> \end{minted}
>>> 
>>> It should wrap them with
>>> 
>>> \begin{pyconsole}
>>> x+2
>>> print x
>>> \end{pyconsole}
>>> 
>>
>> A quick-and-dirty approach to do just that much would be to write an export
>> filter for `src-block' and maybe `inline-src-block', see
>>
>>(info "(org) Advanced configuration")
>>
>>http://orgmode.org/worg/dev/org-export-reference.html#filter-system
>>
>> and 
>>
>> http://orgmode.org/worg/exporters/filter-markup.html
>>
>>
>> Also, `C-h f org--filter TAB' should give you a buffer of such filter
>> functions (and a couple of false positives) that you might browse.
>
> I've briefly looked at the filters. Yes, it seems like that might be one
> way to do this. But I have a hunch it is already implemented, and that I
> just don't know how to access it or what variable to set.
>
> See:
> http://orgmode.org/cgit.cgi/org-mode.git/tree/lisp/ox-latex.el#n2280
>
> Where Case 1 is no fontification, Case 3 is minted, and Case 2 is
> custom. I can see that if `custom-env` is set correctly, it wraps the
> code exactly as I want above:
>
>(custom-env (format "\\begin{%s}\n%s\\end{%s}\n"
>  custom-env
>  (org-export-format-code-default src-block info)
>  custom-env))
>
> But I'm not sure where to set custom-env, although I know I want to set
> it to `pyconsole`.
>
>   -k.

Re: [O] Insert #+BEAMER_HEADER_EXTRA before \begin{document}?

[Andreas Leha]

Eric S Fraga  writes:

> On Thursday,  8 May 2014 at 15:38, Sebastien Vauban wrote:
>
> [...]
>
>> The above things are currently (almost, for some) impossible.  Changing
>> where the #+BEAMER_HEADER placeholder gets inserted makes them possible
>> and easy.
>
> but unfortunately would make other things more difficult.  For instance,
> I often redefine the date command (and sometimes title and author) to do
> something different.  If the header entries were placed after the use of
> theses, things would break for me.
>

Couldn't you use #+LATEX_HEADER for that sort of thing, then?

> I think the creation of an ...EXTRA directive would be better but I've
> argued for this before and have lost that argument.

I agree here.  Why not make that more transparent and
have #+LATEX_HEADER and #+LATEX_HEADER_END as well as #+BEAMER_HEADER
and #+BEAMER_HEADER_END ?

>
> You can achieve what you want by redefining \title, I would
> suggest.  Not pretty but it works.

(Isn't that true for your use case of redefining date, too?)


And last but not least:  I think the particular use case of adding a
short title to a beamer presentation is common enough to deserve proper
org mode support.

Regards,
Andreas

Re: [O] Adding export option for babel language

[Ken Mankoff]

Hi Chuck,

On 2014-05-08 at 12:17, Charles Berry  wrote:
>> I'd like the python code blocks to behave just as they do now, but if I
>> have set (setq org-latex-listings 'pythontex) instead of (setq
>> org-latex-listings 'minted), then instead of wrapping python code blocks
>> with:
>> 
>> \begin{minted}[]{python}
>> x+2
>> print x
>> \end{minted}
>> 
>> It should wrap them with
>> 
>> \begin{pyconsole}
>> x+2
>> print x
>> \end{pyconsole}
>> 
>
> A quick-and-dirty approach to do just that much would be to write an export
> filter for `src-block' and maybe `inline-src-block', see
>
>(info "(org) Advanced configuration")
>
>http://orgmode.org/worg/dev/org-export-reference.html#filter-system
>
> and 
>
> http://orgmode.org/worg/exporters/filter-markup.html
>
>
> Also, `C-h f org--filter TAB' should give you a buffer of such filter
> functions (and a couple of false positives) that you might browse.

I've briefly looked at the filters. Yes, it seems like that might be one
way to do this. But I have a hunch it is already implemented, and that I
just don't know how to access it or what variable to set.

See:
http://orgmode.org/cgit.cgi/org-mode.git/tree/lisp/ox-latex.el#n2280

Where Case 1 is no fontification, Case 3 is minted, and Case 2 is
custom. I can see that if `custom-env` is set correctly, it wraps the
code exactly as I want above:

   (custom-env (format "\\begin{%s}\n%s\\end{%s}\n"
   custom-env
   (org-export-format-code-default src-block info)
   custom-env))

But I'm not sure where to set custom-env, although I know I want to set
it to `pyconsole`.

  -k.

Re: [O] Confused about list indentation

[Leonard Avery Randall]

Guido Van Hoecke wrote:



I am a bit confused about indentation in the example at node
'2.7 Plain Lists' in the Org info file:





The last line aligns the word 'him' directly under 'Sean', which is
what I expect.

The 'He makes a really...' sentence is aligned under the list hyphen,
rather than under 'on DVD...'

Is this not inconsistent? I'd expect it to be indented two extra
positions to the right, similar to the last sentence.



I believe the reason for the disparity is that 'He makes a really funny 
face', is supposed to be associated with 'Peter Jackson being shot by 
legolas' rather than 'on DVD only'. I believe the example is supposed to 
show that list items can contain both subsidiary lists and whole 
paragraphs. If the paragraph were supposed to be associated with the 
lower level list item it would be indented as you expected.


All the best,
Leonard

Re: [O] Insert #+BEAMER_HEADER_EXTRA before \begin{document}?

[Eric S Fraga]

On Thursday,  8 May 2014 at 15:38, Sebastien Vauban wrote:

[...]

> The above things are currently (almost, for some) impossible.  Changing
> where the #+BEAMER_HEADER placeholder gets inserted makes them possible
> and easy.

but unfortunately would make other things more difficult.  For instance,
I often redefine the date command (and sometimes title and author) to do
something different.  If the header entries were placed after the use of
theses, things would break for me.

I think the creation of an ...EXTRA directive would be better but I've
argued for this before and have lost that argument.

You can achieve what you want by redefining \title, I would
suggest.  Not pretty but it works.
-- 
: Eric S Fraga (0xFFFCF67D), Emacs 24.3.1, Org release_8.2.6-937-g60502a

[O] words pre-"lexed" for use as keywords in an agenda view

[Haroldo Stenger]

hello,

is there alredy a word lexer connected somehow to org-mode, that uses the
most frequent words in the org-agenda-files , and offers them to you to
look for the lines in which they occur in an agenda view ?

best
haroldo

[O] bug#17416: bug#17416: insecure temp files in ob-screen.el

[Eric Schulte]

Glenn Morris  writes:

> Eric Schulte wrote:
>
>>> org-babel-screen-session-write-temp-file and org-babel-screen-test seem
>>> to use predictable temp-file names, which is a security issue. Using
>>> `make-temp-file', or if the file names really need to be predictable,
>>> something equivalent to `doc-view-make-safe-dir' (there should really be
>>> a general utility function for this IMO) to first create a /tmp
>>> subdirectory would avoid this.
>>
>> I just pushed up a fix for this issue.  Thanks,
>
> If you mean
>
> http://orgmode.org/cgit.cgi/org-mode.git/commit/?id=fea672d30ef4701721c0d4aa70462760a6b21be7
>
> then's there still org-babel-screen-test.
>

Fixed.

>
> (These are definitely fixes that need merging into the emacs-24 branch.
> IIUC this means they need to be in your maint branch?)

Cherrypicked into maint.

Thanks,

-- 
Eric Schulte
https://cs.unm.edu/~eschulte
PGP: 0x614CA05D

Re: [O] Questions about mail, MIME, etc.

[Peter Davis]

On Thu, May 08, 2014 at 10:34:26PM +0800, Eric Abrahamsen wrote:
> Peter Davis  writes:
> 
> Yeah I got that error too, a while ago, and your message prompted me to
> look at it. It seems like org-mime is just a bit behind the state of
> org-export, and fixing that one dead function link is enough to make it
> work again. I've attached a patch.

Excellent! That worked. Thank you!

> 
> Generating a message buffer is pretty much hard-coded into org-mime.
> Once you're in that buffer, though, the (non-interactive) function
> mml-generate-mime will return the fully encoded mime message as a
> string -- you could save that to a file and do something else with it.
> I'm not 100% confident that's the simplest way to do that.

Ok, I was able to send the message through gnus, even though I don't (normally) 
use it as a mail reader.

> >  3) What I'd really like is a multipart/alternative message where one part 
> > is text/plain, and looks exactly like the emacs buffer display, and the 
> > other part is text/html, and 
> > looks like what org would export to html, complete with tables, images, 
> > etc.
> 
> As far as I know, that's exactly what org-mime does!

Almost. It looks like org-mime puts the actual contents of the buffer into the 
text/plain part, including links, etc. that would normally be hidden on 
display. I think it would be
more useful to make the text/plain part contain what would be output from 
exporting to text. But maybe that's just my preference.

Thank you!

-pd


-- 

Peter Davis
The Tech Curmudgeon
www.techcurmudgeon.com

[O] Confused about list indentation

[Guido Van Hoecke]

Hi,

I am using Org version 8.2.6 (release_8.2.6-949-g751506).

I am a bit confused about indentation in the example at node
'2.7 Plain Lists' in the Org info file:

[quote]
** Lord of the Rings
   My favorite scenes are (in this order)
   1. The attack of the Rohirrim
   2. Eowyn's fight with the witch king
  + this was already my favorite scene in the book
  + I really like Miranda Otto.
   3. Peter Jackson being shot by Legolas
  - on DVD only
  He makes a really funny face when it happens.
   But in the end, no individual scenes matter but the film as a whole.
   Important actors in this film are:
   - Elijah Wood :: He plays Frodo
   - Sean Austin :: He plays Sam, Frodo's friend.  I still remember
 him very well from his role as Mikey Walsh in The Goonies.
[unquote]

The last line aligns the word 'him' directly under 'Sean', which is
what I expect.

The 'He makes a really...' sentence is aligned under the list hyphen,
rather than under 'on DVD...'

Is this not inconsistent? I'd expect it to be indented two extra
positions to the right, similar to the last sentence.

Please advise,


Guido

--
I came to MIT to get an education for myself and a diploma for my mother.

Re: [O] Managing bibtex database using org-mode?

[Richard Lawrence]

Hi Vikas and all,

Vikas Rawal  writes:

>> I manage my whole bibtex database on org. It makes my workflow more
>> integrated. It allows me to keep bib info, todo states and notes all
>> in the same place, and it allows me to access it all through the
>> agenda. I just periodically run org-bibtex to make sure that I have a
>> updated bib file.
>
> This is exactly what I have in mind. Would you mind sharing an example
> file, and may be an outline of your work flow?

I also manage my whole bibtex database in Org.  Here is my setup:

1) I store new readings as I come across them using a capture template.
(See the attached "reading.txt".)  This template is pretty basic, but I
think it could easily be adapted to store more data, such as links to
PDFs, or automatically import Bibtex entries (over org-protocol?) using
a function from org-bibtex.

The relevant stanza from my org-capture-templates is:
#+BEGIN_SRC elisp
("dr" "Reading" entry
 (file+olp ,dissertation-agenda-file "Reading list")
 (file ,(concat org-template-directory "/reading.txt"))
 :prepend t)
#+END_SRC

2) I use a post-capture hook to detect whether a captured entry is a
reading (it looks for the AUTHOR property) and optionally add
bibliographic data using org-bibtex-create-in-current-entry:

#+BEGIN_SRC elisp
(defun add-bibliographic-data ()
  ; this is a bit hacky: we detect the AUTHOR property, and create bibtex 
entries if
  ; it is present
  (message "optionally adding bibliographic data")
  (if (and (org-entry-get (point) "AUTHOR")
   (y-or-n-p "Add bibliographic data? "))
  ; with prefix arg to get all fields:
  (org-bibtex-create-in-current-entry 1)
nil))

(add-hook 'org-capture-before-finalize-hook (lambda () 
(add-bibliographic-data)))
#+END_SRC

This completes the `front-end' portion of my setup, which gets data on
new readings into Org.

The `back-end' setup, which exports the captured entries to a .bib file,
involves a Makefile that calls wrappers around org-bibtex functions.

3) All the wrapper functions do is walk over the Org tree containing my
reading list, using org-map-entries, and export each entry with a
defined CUSTOM_ID value using org-bibtex-headline to a new buffer.  (It
skips those with no CUSTOM_ID, since these won't produce valid bibtex
entries.)  This buffer then gets saved as the new .bib file.  The code
is in bib-export.el, attached.

Note that this code makes some assumptions about my setup (mostly that
all reading entries are stored under a top-level "Reading list" heading
in a certain Org file); it is not suitable for general use without some
adaptation.

You can call the wrapper functions from within Emacs using
M-x reading-list-to-bibtex.

4) I also call the wrapper functions from a Makefile.  This allows me to
get a fresh copy of my .bib file whenever it's needed, just by typing
`make bib'.  Here's the relevant stanza from the Makefile, which lives
in the same directory as the file containing my reading list
(tasks.org):

#+BEGIN_SRC make
EMACS=emacs
BATCH_EMACS=$(EMACS) --batch -Q --load lib/el/org-dissertation.el

build/dissertation.bib: tasks.org lib/el/bib-export.el
$(BATCH_EMACS) --load lib/el/bib-export.el --file tasks.org \
   --funcall reading-list-to-bibtex

bib: build/dissertation.bib
#+END_SRC

That's it!  Hope you find that useful.

Best,
Richard

** %^{Todo state|FIND|PRINT|READ|NOTES} [#%^{Priority|A|B|C}] 
%^{Description|Reading} %^g
   %^{TITLE}p %^{AUTHOR}p %^{AREA}p %?
   :PROPERTIES:
   :Entered: %U
   :END:


bib-export.el
Description: application/emacs-lisp

Re: [O] Adding export option for babel language

[Charles Berry]

Ken Mankoff  gmail.com> writes:

> 
> 
> I'd like to add support for PythonTeX to Org Babel 
> https://github.com/gpoore/pythontex
> 
> The motivation is that PythonTeX is a better literate environment than
> just Org + Babel, because it can print results inline just like an
> interactive Python session, instead of all the code followed by all the
> results. 
> 
> This is just a modification to the existing LaTeX export for python, it
> is not support for a new language. I'm new to Org development and seek
> advice how to begin approaching the solution.
> 
> I'd like the python code blocks to behave just as they do now, but if I
> have set (setq org-latex-listings 'pythontex) instead of (setq
> org-latex-listings 'minted), then instead of wrapping python code blocks
> with:
> 
> \begin{minted}[]{python}
> x+2
> print x
> \end{minted}
> 
> It should wrap them with
> 
> \begin{pyconsole}
> x+2
> print x
> \end{pyconsole}
> 

A quick-and-dirty approach to do just that much would be to write an export
filter for `src-block' and maybe `inline-src-block', see

   (info "(org) Advanced configuration")

   http://orgmode.org/worg/dev/org-export-reference.html#filter-system

and 

http://orgmode.org/worg/exporters/filter-markup.html


Also, `C-h f org--filter TAB' should give you a buffer of such filter
functions (and a couple of false positives) that you might browse.


HTH,

Chuck 

Re: [O] How to tangle?

[Suvayu Ali]

Hi John,

On Thu, May 08, 2014 at 11:36:25AM -0400, John Kitchin wrote:
> that is pretty strange. I just tried it and got
> 
> Tangled 51 code blocks from org-ref.org
> You can run the command `org-babel-tangle' with C-c C-v t
> 
> You could also try:
> [[elisp:(org-babel-load-file "org-ref.org")]]

I tried `M-: (org-babel-load-file "org-ref.org") RET'.  That gave me
the following backtrace:

Debugger entered--Lisp error: (wrong-type-argument stringp nil)
  expand-file-name(nil)
  load-file(nil)
  org-babel-load-file("org-ref.org")
  eval((org-babel-load-file "org-ref.org") nil)
  eval-expression((org-babel-load-file "org-ref.org") nil)
  call-interactively(eval-expression nil nil)
  command-execute(eval-expression)

Something is definitely wrong with my setup.  Although I can't think
where or how.

Cheers,

-- 
Suvayu

Open source is the future. It sets us free.

Re: [O] How to tangle?

[John Kitchin]

that is pretty strange. I just tried it and got

Tangled 51 code blocks from org-ref.org
You can run the command `org-babel-tangle' with C-c C-v t

You could also try:
[[elisp:(org-babel-load-file "org-ref.org")]]

John

---
John Kitchin
Associate Professor
Doherty Hall A207F
Department of Chemical Engineering
Carnegie Mellon University
Pittsburgh, PA 15213
412-268-7803
http://kitchingroup.cheme.cmu.edu



On Thu, May 8, 2014 at 11:27 AM, Suvayu Ali wrote:

> Hi,
>
> I was trying to tangle John's org-ref.org[1]; when I visit the file and
> do `M-x org-babel-tangle RET', all I get is:
>
>   Tangled 0 code blocks from org-ref.org
>
> Any ideas what is wrong?
>
> Footnotes:
>
> [1] 
>
> --
> Suvayu
>
> Open source is the future. It sets us free.
>
>

Re: [O] Questions about mail, MIME, etc.

[Peter Davis]

On Thu, May 08, 2014 at 10:34:26PM +0800, Eric Abrahamsen wrote:
> Peter Davis  writes:
> 
> > I'd love to get mail working so I could send MIME messages right from org 
> > mode. However, I have a couple of issues/questions:
> >
> >  1) I tried using org-mime 
> > , but when I try the 
> > command org-mime-org-buffer-htmlize, I get the error:
> > Symbol's function definition is void: org-export-grab-title-from-buffer
> > I think I followed the setup described on that page. Is this meant for 
> > an older version of orgmode? (I'm running 8.2.5g)
> 
> Yeah I got that error too, a while ago, and your message prompted me to
> look at it. It seems like org-mime is just a bit behind the state of
> org-export, and fixing that one dead function link is enough to make it
> work again. I've attached a patch.

Thanks, Eric! I'll give it a try.

> >  2) I actually use a number of email programs (MH, mutt, etc.), but not 
> > gnus or VM. Is there a way to get org to export the mime to a message file 
> > that I can send (as a message,
> > not as an attachment) from some other program?
> 
> Generating a message buffer is pretty much hard-coded into org-mime.
> Once you're in that buffer, though, the (non-interactive) function
> mml-generate-mime will return the fully encoded mime message as a
> string -- you could save that to a file and do something else with it.
> I'm not 100% confident that's the simplest way to do that.

Thanks. I suppose I can use gnus to send a message, even if I'm not using it to 
read mail.

> >  3) What I'd really like is a multipart/alternative message where one part 
> > is text/plain, and looks exactly like the emacs buffer display, and the 
> > other part is text/html, and 
> > looks like what org would export to html, complete with tables, images, 
> > etc.
> 
> As far as I know, that's exactly what org-mime does!

Great!

Thank you.

-pd


-- 

Peter Davis
The Tech Curmudgeon
www.techcurmudgeon.com

[O] How to tangle?

[Suvayu Ali]

Hi,

I was trying to tangle John's org-ref.org[1]; when I visit the file and
do `M-x org-babel-tangle RET', all I get is:

  Tangled 0 code blocks from org-ref.org

Any ideas what is wrong?

Footnotes:

[1] 

-- 
Suvayu

Open source is the future. It sets us free.

Re: [O] Insert #+BEAMER_HEADER_EXTRA before \begin{document}?

[Suvayu Ali]

On Thu, May 08, 2014 at 03:38:21PM +0200, Sebastien Vauban wrote:
> Suvayu Ali wrote:
> > On Wed, May 07, 2014 at 07:26:26PM -0400, Nick Dokos wrote:
> 
> > I think I looked into this sometime back and I don't think there was a
> > nice resolution (as evidenced by Seb's links).  That said, I vaguely
> > recall a discussion on this 1 and half to 2 years back (that would be
> > the old exporter of course).  I think supporting this as a feature was
> > bypassed since this is very much LaTeX specific.
> 
> While I think that LaTeX should be treated as a first-class backend (and
> not just 1 out of 10 or so), I'm not asking for something new to be
> added: just that #+BEAMER_HEADER is inserted before
> the \begin{document} -- hence *after* things like \title, \author, \date,
> and \usetheme.
> 
> Right now, in an Org Beamer document, we can add specific code via
> 3 different types of call (with example data):
> 
> - #+LaTeX_HEADER:   \institute[short name]{Full name}
> - #+LaTeX_HEADER_EXTRA: \usepackage{lxfonts}
> - #+BEAMER_HEADER:  \setbeamercolor{structure}{fg=craneblue}
> 
> If we simply allow the placeholder for #+BEAMER_HEADER to be somewhere
> else (right before \begin{document}) than where it currently is, it will
> allow one to:
> 
> - add a short title of the document for the footer
> - add a short author name for the footer (see AnnArbor)
> - add a short date version (for example, "May 2014" instead of the full
>   "8 May 2014")
> - customize some colors of the Beamer themes
> - and many other things...
> 
> The above things are currently (almost, for some) impossible.  Changing
> where the #+BEAMER_HEADER placeholder gets inserted makes them possible
> and easy.

You have good arguments.  Maybe it should be reconsidered.

-- 
Suvayu

Open source is the future. It sets us free.

Re: [O] Questions about mail, MIME, etc.

[Eric Abrahamsen]

Peter Davis  writes:

> I'd love to get mail working so I could send MIME messages right from org 
> mode. However, I have a couple of issues/questions:
>
>  1) I tried using org-mime 
> , but when I try the 
> command org-mime-org-buffer-htmlize, I get the error:
> Symbol's function definition is void: org-export-grab-title-from-buffer
> I think I followed the setup described on that page. Is this meant for an 
> older version of orgmode? (I'm running 8.2.5g)

Yeah I got that error too, a while ago, and your message prompted me to
look at it. It seems like org-mime is just a bit behind the state of
org-export, and fixing that one dead function link is enough to make it
work again. I've attached a patch.

>  2) I actually use a number of email programs (MH, mutt, etc.), but not gnus 
> or VM. Is there a way to get org to export the mime to a message file that I 
> can send (as a message,
> not as an attachment) from some other program?

Generating a message buffer is pretty much hard-coded into org-mime.
Once you're in that buffer, though, the (non-interactive) function
mml-generate-mime will return the fully encoded mime message as a
string -- you could save that to a file and do something else with it.
I'm not 100% confident that's the simplest way to do that.

>  3) What I'd really like is a multipart/alternative message where one part is 
> text/plain, and looks exactly like the emacs buffer display, and the other 
> part is text/html, and 
> looks like what org would export to html, complete with tables, images, 
> etc.

As far as I know, that's exactly what org-mime does!

HTH,
Eric

>From c967afb70bd7c9039c09d7c7f22388e1eced30fa Mon Sep 17 00:00:00 2001
From: Eric Abrahamsen 
Date: Thu, 8 May 2014 22:32:01 +0800
Subject: [PATCH] Update org-mime to current export functions

* /contrib/lisp/org-mime.el (org-mime-send-buffer):

This function was using `org-export-grab-title-from-buffer', which no
longer exists.
---
 contrib/lisp/org-mime.el | 6 --
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/contrib/lisp/org-mime.el b/contrib/lisp/org-mime.el
index b0007ac..5f874d9 100644
--- a/contrib/lisp/org-mime.el
+++ b/contrib/lisp/org-mime.el
@@ -269,8 +269,10 @@ export that region, otherwise export the entire body."
 (defun org-mime-send-buffer (&optional fmt)
   (run-hooks 'org-mime-send-buffer-hook)
   (let* ((region-p (org-region-active-p))
-	 (subject (org-export-grab-title-from-buffer))
- (file (buffer-file-name (current-buffer)))
+	 (file (buffer-file-name (current-buffer)))
+	 (subject (if (not file) (buffer-name (buffer-base-buffer))
+		   (file-name-sans-extension
+		(file-name-nondirectory file
  (body-start (or (and region-p (region-beginning))
  (save-excursion (goto-char (point-min)
  (body-end (or (and region-p (region-end)) (point-max)))
-- 
1.9.2

Re: [O] org-ref code

[John Kitchin]

I added a user variable for that key-binding. I like C-c ] because there is
no shift to get ). You can set org-ref-insert-cite-key to what ever
shortcut you prefer now.

I would prefer to keep org-ref where it is until it "stabilizes". This
summer my group will be using it pretty extensively for writing papers, so
I anticipate by this fall it will be pretty stable.

John

---
John Kitchin
Associate Professor
Doherty Hall A207F
Department of Chemical Engineering
Carnegie Mellon University
Pittsburgh, PA 15213
412-268-7803
http://kitchingroup.cheme.cmu.edu



On Thu, May 8, 2014 at 4:31 AM, Vikas Rawal  wrote:

>
>
> All the talk about citations in org-mode inspired me to finish and polish
> some code I have been working on for my group for a while on
> bibtex/reftex/org-mode integration. I packaged it up in a literate
> programming org-file here:
> https://github.com/jkitchin/jmax/blob/master/org-ref.org.
>
>
> Thanks John. This looks very useful.
>
> Do you plan to add this to org-mode/contrib?
>
> I was wondering if it would be useful to change the default keybinding C-c
> ] to C-c ) instead, since C-c ] is by default bound to org-remove-file.
>
> Vikas
>
>

[O] current task being worked in agenda time grid

[J. David Boyd]

Is there any way to do that?

It would be beneficial if, when I did C-a a, the time grid could show, at the
current time, what I am currently clocking time against.

I know that it shows up in the mode line, but my emacs window is seldom wide
enough for me to read that, actually.

Thanks for any pointer to the way to do this.

Dave in New Port Richey, FL

Re: [O] crossing out tasks

[Nick Dokos]

Ian Barton  writes:

> On 08/05/14 11:12, Sharon Kimble wrote:
>> This is so simple but I can't find a solution. If I have a list of
>> tasks with + in front, when done I can put a + at the end which
>> crosses them out, making it very easy to see what I have left to
>> do. Except, sometimes the preceding task inherits the crossing out
>> too, even though it does not have a + at the end, so how can I stop
>> the inheritance please?
>>
>> Sharon.
>
> I seem to remember that Carsten doesn't like strike through
> faces. Maybe it's his secret plot to stop people using them:)
>
> On a more constructive note. Why don't you just make them TODO's and
> then mark them DONE in the usual way. You should be able to customize
> the DONE face to a strike through one.
>

... or use checkboxes.

Nick

Re: [O] Insert #+BEAMER_HEADER_EXTRA before \begin{document}?

[Sebastien Vauban]

Suvayu Ali wrote:
> On Wed, May 07, 2014 at 07:26:26PM -0400, Nick Dokos wrote:
>> Suvayu Ali  writes:
>>> On Wed, May 07, 2014 at 09:01:39PM +0200, Sebastien Vauban wrote:
>>>
 To insert a short title for a Beamer presentation, you can glean
 the following answers on the Web:
 
 - Using `#+BEAMER_HEADER_EXTRA' which -is- +was+ exported /after/ the
   `\title' command.
>>>
>>> I use this:
>>>
>>>   #+LATEX_HEADER: \subtitle{Some subtitle}
>>
>> Are you sure it worked with beamer? AFAICT, it just adds a subtitle
>> to the title slide, nothing more. In particular, beamer does not seem
>> to use it for the purpose that Seb wants it: a (limited-length) marker
>> on each slide.
>
> You are right.  I misunderstood Seb's question.  :-p

Yes.

> I think I looked into this sometime back and I don't think there was a
> nice resolution (as evidenced by Seb's links).  That said, I vaguely
> recall a discussion on this 1 and half to 2 years back (that would be
> the old exporter of course).  I think supporting this as a feature was
> bypassed since this is very much LaTeX specific.

While I think that LaTeX should be treated as a first-class backend (and
not just 1 out of 10 or so), I'm not asking for something new to be
added: just that #+BEAMER_HEADER is inserted before
the \begin{document} -- hence *after* things like \title, \author, \date,
and \usetheme.

Right now, in an Org Beamer document, we can add specific code via
3 different types of call (with example data):

- #+LaTeX_HEADER:   \institute[short name]{Full name}
- #+LaTeX_HEADER_EXTRA: \usepackage{lxfonts}
- #+BEAMER_HEADER:  \setbeamercolor{structure}{fg=craneblue}

If we simply allow the placeholder for #+BEAMER_HEADER to be somewhere
else (right before \begin{document}) than where it currently is, it will
allow one to:

- add a short title of the document for the footer
- add a short author name for the footer (see AnnArbor)
- add a short date version (for example, "May 2014" instead of the full
  "8 May 2014")
- customize some colors of the Beamer themes
- and many other things...

The above things are currently (almost, for some) impossible.  Changing
where the #+BEAMER_HEADER placeholder gets inserted makes them possible
and easy.

Best regards,
  Seb

-- 
Sebastien Vauban

Re: [O] crossing out tasks

[Ian Barton]

On 08/05/14 11:12, Sharon Kimble wrote:

This is so simple but I can't find a solution. If I have a list of
tasks with + in front, when done I can put a + at the end which
crosses them out, making it very easy to see what I have left to
do. Except, sometimes the preceding task inherits the crossing out
too, even though it does not have a + at the end, so how can I stop
the inheritance please?

Sharon.


I seem to remember that Carsten doesn't like strike through faces. Maybe 
it's his secret plot to stop people using them:)


On a more constructive note. Why don't you just make them TODO's and 
then mark them DONE in the usual way. You should be able to customize 
the DONE face to a strike through one.


Ian.

[O] Questions about mail, MIME, etc.

[Peter Davis]

I'd love to get mail working so I could send MIME messages right from org mode. 
However, I have a couple of issues/questions:

 1) I tried using org-mime , 
but when I try the command org-mime-org-buffer-htmlize, I get the error:
Symbol's function definition is void: org-export-grab-title-from-buffer
I think I followed the setup described on that page. Is this meant for an 
older version of orgmode? (I'm running 8.2.5g)

 2) I actually use a number of email programs (MH, mutt, etc.), but not gnus or 
VM. Is there a way to get org to export the mime to a message file that I can 
send (as a message,
not as an attachment) from some other program?

 3) What I'd really like is a multipart/alternative message where one part is 
text/plain, and looks exactly like the emacs buffer display, and the other part 
is text/html, and 
looks like what org would export to html, complete with tables, images, etc.

Thanks!

-pd


-- 

Peter Davis
The Tech Curmudgeon
www.techcurmudgeon.com

Re: [O] Using KOMA and Memoir?

[Suvayu Ali]

On Thu, May 08, 2014 at 08:08:36AM +0200, Martin Schöön wrote:
> On 8 May 2014 00:29, Suvayu Ali  wrote:
> 
> > On Wed, May 07, 2014 at 11:19:07PM +0200, Martin Schöön wrote:
> > > Quick up-date before bed-time: I commented out the (add-to-list
> > > 'org-latex-classes stuff
> > > and restarted emacs: No rerror message and still no org-latex-classes
> > > variable found
> > > when trying out C-h v org-latex-classes.
> >
> > I have a feeling you are a victim of the infamous mixed install issue.
> >
> > 
> 
> The output of M-x org-version looks good

Unfortunately that is not a complete test.  You should compare the
load-path shadows and match them library for library (excluding
libraries that exist in only one of the distributions).

Hope this helps,

-- 
Suvayu

Open source is the future. It sets us free.

Re: [O] org-export-babel-evaluate

[Vikas Rawal]

> 
>> Could somebody tell me how to define org-export-babel-evaluate for a file?
>> 
>> I want the default to be t, but want to set it to nil in some of my files.
>> 
> 
> (info "(emacs) Specifying File Variables”)

Perfect. Thank you.

Vikas

Re: [O] html5?

[Nick Dokos]

Dave Pawson  writes:

> org.html says
>
> "
>
> Fancy HTML5 export
>
> HTML5 introduces several new element types. By default, Org will not
> make use of these element types, but you can set org-html-html5-fancy
> to t (or set html5-fancy item in an OPTIONS line), to enable a few new
> block-level elements. These are created using arbitrary #+BEGIN and
> #+END blocks. For instance:"
>
> C-h v org-html-html5  has no auto-complete, hence guessing this
> variable does not exist?
>

Not in orgmode 7.x, but it does exist in 8.x. Check with

M-x org-version


-- 
Nick

[O] html5?

[Dave Pawson]

org.html says

"

Fancy HTML5 export

HTML5 introduces several new element types. By default, Org will not
make use of these element types, but you can set org-html-html5-fancy
to t (or set html5-fancy item in an OPTIONS line), to enable a few new
block-level elements. These are created using arbitrary #+BEGIN and
#+END blocks. For instance:"

C-h v org-html-html5  has no auto-complete, hence guessing this
variable does not exist?

emacs vsn is :

GNU Emacs 24.3.1 (x86_64-redhat-linux-gnu, GTK+ Version 3.10.8)


regards

-- 
Dave Pawson
XSLT XSL-FO FAQ.
Docbook FAQ.
http://www.dpawson.co.uk

Re: [O] org-export-babel-evaluate

[Nick Dokos]

Vikas Rawal  writes:

> Could somebody tell me how to define org-export-babel-evaluate for a file?
>
> I want the default to be t, but want to set it to nil in some of my files.
>

(info "(emacs) Specifying File Variables")

-- 
Nick

[O] [BUG] superscripts exported as subscripts by ox-ascii

[Suvayu Ali]

Hi,

When exporting the following snippets, superscripts are exported as
subscripts by the ascii exporter.

Org src:

- B⁺ → D(K_{s}ππ)K⁺, B → D(K_{s}KK)K⁺,
- CPV in B^{±} → D(K_{s}K^{±}π^{∓})K^{±}, and B^{±} →
  D(K_{s}K^{∓}π^{±})K^{±},

Exported text:

• B⁺ → D(K_{s}ππ)K⁺, B → D(K_{s}KK)K⁺,
• CPV in B_{±} → D(K_{s}K_{±}π_{∓})K_{±}, and B_{±} →
  D(K_{s}K_{∓}π_{±})K_{±},

Unfortunately I noticed this after I sent the exported text to a bunch
of my collaborators!  Thankfully we work for the same institute :).

Cheers,

-- 
Suvayu

Open source is the future. It sets us free.

Re: [O] org-mode variables

[Igor Sosa Mayor]

Dave Pawson  writes:

> Searching http://orgmode.org/org.html
> I failed to find how to modify org-mode variables,
> where they are stored, etc.
>
> They are listed, but no mention of setting them?
>
> Are they standard emacs vars, if so , perhaps
> this could be made clear in the manual please?

yes, they are standard emacs variables, you can normally set with

(setq variable value)

[O] org-mode variables

[Dave Pawson]

Searching http://orgmode.org/org.html
I failed to find how to modify org-mode variables,
where they are stored, etc.

They are listed, but no mention of setting them?

Are they standard emacs vars, if so , perhaps
this could be made clear in the manual please?

regards

-- 
Dave Pawson
XSLT XSL-FO FAQ.
Docbook FAQ.
http://www.dpawson.co.uk

Re: [O] Managing bibtex database using org-mode?

[Leonard Avery Randall]

Hi Vikas,

Vikas Rawal wrote:



This is exactly what I have in mind. Would you mind sharing an example 
file, and may be an outline of your work flow?



I only switched over to using org-bibtex about 4 weeks ago, so I have 
not yet perfected my workflow. However, I will try to give you some idea 
of what has worked best for me thus far. I am rather busy for the next 
couple of days, so I do not have the time to put together an example 
file etc. right now, but hopefully I will have a bit of time this weekend.


All best,
Leonard

[O] crossing out tasks

[Sharon Kimble]

This is so simple but I can't find a solution. If I have a list of
tasks with + in front, when done I can put a + at the end which
crosses them out, making it very easy to see what I have left to
do. Except, sometimes the preceding task inherits the crossing out
too, even though it does not have a + at the end, so how can I stop
the inheritance please?

Sharon.
-- 
A taste of linux = http://www.sharons.org.uk
my git repo = https://bitbucket.org/boudiccas/dots
TGmeds = http://www.tgmeds.org.uk
Debian testing, Fluxbox 1.3.5, emacs 24.4.50.20


signature.asc
Description: PGP signature

Re: [O] [babel][PATCHES] ob-R patches for review

[Rainer M Krug]

Envoyé de mon iPhone

> Le 8 mai 2014 à 04:26, Charles Berry  a écrit :
> 
> Eric Schulte  gmail.com> writes:
> 
>> 
>> Rainer M Krug  krugs.de> writes:
>> 
>>> Hi
>>> 
>>> Attached please find seven patches for review to implement the storing
>>> of org variables in their own environment and to make the org-issued R
>>> code look nicer in the R session.
>>> 
>>> Thanks,
>>> 
>>> Rainer
>> 
>> Hi Rainer,
>> 
>> Thanks for these patches.  I don't have the R experience to review or
>> maintain them, but I'm happy to apply them.
>> 
>> I missed some previous discussion in this thread.  Are these patches
>> ready to be applied as is?
> 
> 
> IMO, the patches hard coded behaviors that would better be customizable
> and optional. 

I'll give feedback tomorrow and let you know about customization of the name of 
the environment. The general behavior of storing the variables in an 
environment should not be customizable as it is

1) safer then the behavior of storing each variable separately
2) no changes for the user are introduced 

Cheers

Rainer

> 
> Rainer and I had some back and forth about this -- see the thread.
> 
> Best,
> 
> Chuck
> 
> 
> 

[O] strange behaviour in org-agenda-diary-entry

[Eric S Fraga]

Dear all,

Just a quick heads up to say that I have some strange behaviour that
appeared within the past week or so:  I manage my diary by viewing it in
org-agenda and adding entries from that view with "i d"
(org-agenda-diary-entry).  I have org-agenda-diary-file defined and my
diary entries are in a date-tree format.  Therefore, new entries should
be inserted as fourth level headings (year -> month -> day -> entry) and
this is how things have been until recently.

Something has changed so that my entries are now inserted at the second
level.

There have been no obvious changes in org-agenda that would lead to
this, at least nothing in the past month.

This happens with up to date org, with emacs -Q and only
org-agenda-files and org-agenda-diary-file set.

I don't have time right now to investigate this further but I thought I
would post this in case anybody has any insight.  I'll come back to this
later as I rely on this functionality a lot!

Thanks,
eric

-- 
: Eric S Fraga (0xFFFCF67D), Emacs 24.4.50.2, Org release_8.2.6-949-g751506

Re: [O] [babel][PATCHES] ob-R patches for review

[Rainer M Krug]

> Le 7 mai 2014 à 12:27, Eric Schulte  a écrit :
> 
> Rainer M Krug  writes:
> 
>> Hi
>> 
>> Attached please find seven patches for review to implement the storing
>> of org variables in their own environment and to make the org-issued R
>> code look nicer in the R session.
>> 
>> Thanks,
>> 
>> Rainer
> 
> Hi Rainer,
> 
> Thanks for these patches.  I don't have the R experience to review or
> maintain them, but I'm happy to apply them.
> 
> I missed some previous discussion in this thread.  Are these patches
> ready to be applied as is?

I'll look at it again tomorrow and let you know as I made some changes since 
then. Do you prefer one patch to several?

Cheers,

Rainer

> 
> Thanks,
> 
> -- 
> Eric Schulte
> https://cs.unm.edu/~eschulte
> PGP: 0x614CA05D

Re: [O] Exporting org-mode source

[Sebastien Vauban]

Vikas Rawal wrote:
>>> It does not work without ":exports code”
>> 
>> I don't understand that, as ":exports code" is the default for Org code
>> blocks, as shown by:
>> 
>>  ╭
>>  │ org-babel-default-header-args:org is a variable defined in `ob-org.el'.
>>  │ Its value is ((:results . "raw silent") (:exports . "code"))
>>  │
>>  │ Documentation:
>>  │ Default arguments for evaluating a org source block.
>>  ╰
>
> Indeed, my bad.
>
> I had "#+property: exports results” in the file header, something that I have
> been routinely copying from one file to another, since usually do not want to
> export code.
>
> Sorry.

Indeed, that explains a lot of the misunderstandings!

Best regards,
  Seb

-- 
Sebastien Vauban

Re: [O] problem with org-caldav and ox-icalendar: UID property wrapping

[Eric S Fraga]

On Wednesday,  7 May 2014 at 22:45, David Engster wrote:

[...]

> I've already rewritten that part in org-caldav, but it needs more
> testing. I'll push a fix in the coming days.

Excellent!  I look forward to the fix.  Thanks.

-- 
: Eric S Fraga (0xFFFCF67D), Emacs 24.4.50.2, Org release_8.2.6-937-g60502a

Re: [O] org-ref code

[Vikas Rawal]

> 
> All the talk about citations in org-mode inspired me to finish and polish 
> some code I have been working on for my group for a while on 
> bibtex/reftex/org-mode integration. I packaged it up in a literate 
> programming org-file here: 
> https://github.com/jkitchin/jmax/blob/master/org-ref.org.
> 

Thanks John. This looks very useful. 

Do you plan to add this to org-mode/contrib?

I was wondering if it would be useful to change the default keybinding C-c ] to 
C-c ) instead, since C-c ] is by default bound to org-remove-file.

Vikas

Re: [O] Using KOMA and Memoir?

[Eric S Fraga]

On Wednesday,  7 May 2014 at 23:03, Martin Schöön wrote:

[...]

> The LaTeX call sits just before the KOMA stuff. No ox-latex to be found, I
> haven't
> needed it so far. Is that maybe...

Could you post the initialisation you do have?  It's difficult to debug
your case with partial information.  My gut feeling is that you are not
loading org properly and are indeed falling victim to a mixed
installation scenario, as mentioned by Suvayu.

In m experience, you need to load org, then ox-latex and finally
customise org-latex-classes.  If you are not doing this, things won't
work.

-- 
: Eric S Fraga (0xFFFCF67D), Emacs 24.3.1, Org release_8.2.6-937-g60502a

Re: [O] Exporting org-mode source

[Sebastien Vauban]

Vikas Rawal wrote:
> On 04-May-2014, at 11:46 am, Han Fan  wrote:
>> Fletcher Charest  writes:
>>> 
>>> Sorry if I misunderstood... If you create an Org source block like
>>> this with nothing inside:
>>> 
>>> #+begin_src org
>>> 
>>> #+end_src
>>> 
>>> ...then, with your cursor inside, enter it with C-c ', write your
>>> org tree, and validate with C-c ' again, then export... Does it do
>>> what you want?
> 
> This is what works for me
>
> #+begin_src org :exports code
>
> #+end_src
>
> It does not work without ":exports code”

I don't understand that, as ":exports code" is the default for Org code
blocks, as shown by:

  ╭
  │ org-babel-default-header-args:org is a variable defined in `ob-org.el'.
  │ Its value is ((:results . "raw silent") (:exports . "code"))
  │
  │ Documentation:
  │ Default arguments for evaluating a org source block.
  ╰

Best regards,
  Seb

-- 
Sebastien Vauban

[O] org-export-babel-evaluate

[Vikas Rawal]

Could somebody tell me how to define org-export-babel-evaluate for a file?

I want the default to be t, but want to set it to nil in some of my files.

Vikas

[O] bug#17416: bug#17416: insecure temp files in ob-screen.el

[Glenn Morris]

Eric Schulte wrote:

>> org-babel-screen-session-write-temp-file and org-babel-screen-test seem
>> to use predictable temp-file names, which is a security issue. Using
>> `make-temp-file', or if the file names really need to be predictable,
>> something equivalent to `doc-view-make-safe-dir' (there should really be
>> a general utility function for this IMO) to first create a /tmp
>> subdirectory would avoid this.
>
> I just pushed up a fix for this issue.  Thanks,

If you mean

http://orgmode.org/cgit.cgi/org-mode.git/commit/?id=fea672d30ef4701721c0d4aa70462760a6b21be7

then's there still org-babel-screen-test.

(These are definitely fixes that need merging into the emacs-24 branch.
IIUC this means they need to be in your maint branch?)