External Email - Use Caution        

That looks fine. You are logged in and you changed the directory. Just put the 
file now:
 
   put <file>

(In general the command depends on your FTP client, but a 'put' command should 
be available in every FTP client I guess.) 

A general note: you may be better off using a graphical FTP client. Depending 
on your Operating System, you may want to try something like WinSCP, FileZilla 
Client, or CyberDuck.

> On December 3, 2018 at 4:33 PM Rosalia Dacosta Aguayo <rdacos...@gmail.com> 
> wrote:
> 
> 
>         External Email - Use Caution        
> 
> Hi Bruce,
> 
> Sorry for double posting.
> I am advancing, but there is still some point I am missing. I would greatly
> appreciate your help:
> 
> rosalia@rosalia-Lenovo-Y520-15IKBN ~/Desktop $ cd
> /home/rosalia/Desktop/transferrosalia@rosalia-Lenovo-Y520-15IKBN
> ~/Desktop/transfer $ ftp surfer.nmr.mgh.harvard.edu
> Connected to surfer.nmr.mgh.harvard.edu.
> 220-This is the Martinos Center Anonymous FTP service. Use of this
> site
> 220-shows implicit consent to our Acceptable Use Policy outlined
> at
> 220-http://www.nmr.mgh.harvard.edu/martinos/userInfo/computer/nmr-aup.php
> 
> 220-
> 220-OPERATIONAL NOTE:  If, when doing a GET or PUT, you encounter either
> 220-
> 220-229 Entering Extended Passive Mode
> 220-
> 220-                   and nothing happens OR
> 220-
> 220-229 Entering Extended Passive Mode
> 220-500 Bad EPRT protocol.
> 220-
> 220-                  try issuing the EPSV command prior to GET or PUT.
> 220-
> 220
> Name (surfer.nmr.mgh.harvard.edu:rosalia): anonymous
> 331 Please specify the password.
> Password:
> 230 Login successful.
> Remote system type is UNIX.
> Using binary mode to transfer files.
> ftp> cd transfer/incoming
> 250 Directory successfully changed.
> ftp> two_different_problems.txt
> ?Invalid command
> ftp>
> 
> 
> On Mon, Dec 3, 2018 at 4:06 PM Rosalia Dacosta Aguayo <rdacos...@gmail.com>
> wrote:
> 
> > Hi Bruce,
> >
> > Thank you for your reply.
> > I am having problems when trying to upload the two files with FTP, it
> > seems the problem is with the directory.
> > rosalia@rosalia-Lenovo-Y520-15IKBN ~/Desktop $ ftp
> > surfer.nmr.mgh.harvard.edu
> > Connected to surfer.nmr.mgh.harvard.edu.
> > 220-This is the Martinos Center Anonymous FTP service. Use of this
> > site
> > 220-shows implicit consent to our Acceptable Use Policy outlined
> > at
> > 220-http://www.nmr.mgh.harvard.edu/martinos/userInfo/computer/nmr-aup.php
> >
> > 220-
> > 220-OPERATIONAL NOTE:  If, when doing a GET or PUT, you encounter either
> > 220-
> > 220-229 Entering Extended Passive Mode
> > 220-
> > 220-                   and nothing happens OR
> > 220-
> > 220-229 Entering Extended Passive Mode
> > 220-500 Bad EPRT protocol.
> > 220-
> > 220-                  try issuing the EPSV command prior to GET or PUT.
> > 220-
> > 220
> > Name (surfer.nmr.mgh.harvard.edu:rosalia): anonymous
> > 331 Please specify the password.
> > Password:
> > 230 Login successful.
> > Remote system type is UNIX.
> > Using binary mode to transfer files.
> > ftp> cd home/rosalia/Desktop/transfer
> > 550 Failed to change directory.
> > ftp>
> >
> >
> > On Mon, Dec 3, 2018 at 3:50 PM Bruce Fischl <fis...@nmr.mgh.harvard.edu>
> > wrote:
> >
> >> Hi Rosalia
> >>
> >> you always have to run autorecon3 every time autorecon2 is run
> >>
> >> cheers
> >> Bruce
> >>
> >>
> >> On Mon, 3 Dec 2018, Rosalia
> >> Dacosta Aguayo wrote:
> >>
> >> >
> >> >         External Email - Use Caution
> >> >
> >> > Dear Bruce and Bram,
> >> >
> >> > After improving the pial surface for my participants, I have seen that
> >> some of them do not need
> >> > control points. My question is: for those ones, should I run
> >> -autorecon2 and -autorecon3 or only
> >> > -autorecon3.
> >> >
> >> > Hi Bruce and Bram, I will try to upload two problematic files. When I
> >> told you that I have been
> >> > editing all my participants I was referring that some of them need more
> >> editing than others, and the
> >> > ones that needed the less I just tried to improve the pial surface not
> >> too much, but now the results
> >> > are better than before.
> >> >
> >> > Thank you in advance for your help.Yours sincerely,
> >> > Rosalia
> >> >
> >> >_______________________________________________
> >> Freesurfer mailing list
> >> Freesurfer@nmr.mgh.harvard.edu
> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
> >
> >
> _______________________________________________
> Freesurfer mailing list
> Freesurfer@nmr.mgh.harvard.edu
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-- 
Tim

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