Hello FreeSurfer Developers I'm attempting to evaluate a segmentation result from CAT12, (sorry) with the Freeview program. For version 1.0 superimposing a gifti surface on top of a nifti volume works beautifully (see results here: https://www.dropbox.com/s/lwhonnzy7n2t87x/Freeview1.0.pdf?dl=0 <https://www.dropbox.com/s/lwhonnzy7n2t87x/Freeview1.0.pdf?dl=0> ), but with the new version 2.0 the orientation is messed up (see result here: https://www.dropbox.com/s/ma6p4batv2cc6w4/Freeview2.0.pdf?dl=0 <https://www.dropbox.com/s/ma6p4batv2cc6w4/Freeview2.0.pdf?dl=0> ), for the exact same files. Has anybody else experienced this problem, and could it potentially be caused by recent changes in the minc tools which nifti converter I know have been changed between the two Freeview versions.
The issue seems to be platform independent and exist for both MacOS 10.12.15 and linux (Ubuntu 16.04.1 LTS) Best Torben Torben Ellegaard Lund Associate Professor, PhD Center of Functionally Integrative Neuroscience (CFIN) Aarhus University Aarhus University Hospital Building 10G, 5th floor, room 31 Noerrebrogade 44 8000 Aarhus C Denmark Phone: +45 7846 4380 Fax: +45 7846 4400 http://www.cfin.au.dk <http://www.cfin.au.dk/> torbenel...@cfin.au.dk <mailto:torbenel...@cfin.au.dk> (for official stuff) torbenel...@me.com <mailto:torbenel...@me.com> (for faster response)
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