Re: [Freesurfer] Qdec crash while analysis almost finished

2021-01-15 Thread chenbh35 
External Email - Use Caution

Hi Douglas,

I used to work with v5.3(centOS6) before and recently I changed a new computer, 
so I hope to keep using the same version(v5.3) in case of some version problem 
with old results. But I couldn't perform a qdec analysis because It kept giving 
me the invalid license key error when I press the analyze button. Owing to I am 
using different linux system(Ubuntu20), I install v6 to see if the error still 
exist. Qdec kept well during loading table file and generate stats file, but 
after I press the analyze  button and it almost finished, the interface 
suddenly crashed and disappear as the content of terminal I have sent before. 
Wheareas, I used the mri_glmfit command in the terminal and it can work. That 
really confused me. 

As to the license file, they have the same content as I have apply for license 
file three times after I downloaded different versions(v5.3,v6.0,v7.1). So I 
think using which one is OK maybe.

Chan

-原始邮件-
发件人:"Greve, Douglas N.,Ph.D." 
发送时间:2021-01-15 00:05:53 (星期五)
收件人: "freesurfer@nmr.mgh.harvard.edu" 
抄送:
主题: Re: [Freesurfer] Qdec crash while analysis almost finished

I'm not sure I understand. Are you using v6 qdec with a 5.3 license file?


On 1/13/2021 2:54 AM, chenb...@mail.sysu.edu.cn wrote:


External Email - Use Caution

Hi, dear Freesurfer experts,




I recently came across an invalid Freesurfer license key error while using 
v5.3, and I tried apply for another license key, it just sent me the same 
license key as I have apply before. Then I put the licence file to 
/usr/local/freesurfer and has changed the name to .license as well. But it 
still doesn't work. Owing to the version I used last time was v6.0, so I 
reinstall a v6.0 and use the same license file. 

But here comes the new problem, when the analysis almost finished, qdec just 
crash and disappear, parts of the contents in the command window are:

""""""""""""""""""""""

Writing results
  lh-Avg-Intercept-thickness
maxvox sig=1e+10  F=3846.45  at  index 14 0 0seed=1611502349
  lh-Diff-PCE-CON-Intercept-thickness
maxvox sig=3.52355  F=15.3058  at  index 11472 0 0seed=1611502349
mri_glmfit done
ninputs = 2
Checking inputs
nframestot = 2
Allocing output
Done allocing
nframes = 2
Writing to /media/lava/DATA/ESSAY/FirstWave/qdec/Untitled/contrasts.sig.mgh

--
ERROR: Invalid FreeSurfer license key found in license file 
/usr/local/freesurfer/license.txt
  If you are outside the NMR-Martinos Center,
  go to 
http://secure-web.cisco.com/12IMz3Y7rTVztzuldpNKAzkOidv5aXs4jMwblK0uNWTRHT39sbFSESHbr6MlSyJSfw3U64yrVx7i9kelES7w6JlB43Y8Vk-KkYgRL0uUuZljVYMjYZ3SQg63KdDqU_t5ooLkrlkk_PNACjX6LLWlLAVMVxXKhp3b-pqIMQT0VciDmBgvmCpU8B85n8cPn1eWXnuaZhfzUL5ciYRZBw1Vffn5aNtHj8tcYSKaG0qPdEed-QcrxPauza2vgmTcvsv8L/http%3A%2F%2Fsurfer.nmr.mgh.harvard.edu
 to 
  get a valid license file (it's free).
  If you are inside the NMR-Martinos Center,
  make sure to source the standard environment.




"""""""""""""""""""""""

I wonder what was the question?  Appreciate for any suggestions.





Freesurfer mailing list 
freesur...@nmr.mgh.harvard.eduhttps://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer

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Re: [Freesurfer] Qdec crash while analysis almost finished

2021-01-14 Thread Greve, Douglas N.,Ph.D. 
I'm not sure I understand. Are you using v6 qdec with a 5.3 license file?

On 1/13/2021 2:54 AM, 
chenb...@mail.sysu.edu.cn wrote:

External Email - Use Caution

Hi, dear Freesurfer experts,


I recently came across an invalid Freesurfer license key error while using 
v5.3, and I tried apply for another license key, it just sent me the same 
license key as I have apply before. Then I put the licence file to 
/usr/local/freesurfer and has changed the name to .license as well. But it 
still doesn't work. Owing to the version I used last time was v6.0, so I 
reinstall a v6.0 and use the same license file.

But here comes the new problem, when the analysis almost finished, qdec just 
crash and disappear, parts of the contents in the command window are:

""

Writing results
  lh-Avg-Intercept-thickness
maxvox sig=1e+10  F=3846.45  at  index 14 0 0seed=1611502349
  lh-Diff-PCE-CON-Intercept-thickness
maxvox sig=3.52355  F=15.3058  at  index 11472 0 0seed=1611502349
mri_glmfit done
ninputs = 2
Checking inputs
nframestot = 2
Allocing output
Done allocing
nframes = 2
Writing to /media/lava/DATA/ESSAY/FirstWave/qdec/Untitled/contrasts.sig.mgh

--
ERROR: Invalid FreeSurfer license key found in license file 
/usr/local/freesurfer/license.txt
  If you are outside the NMR-Martinos Center,
  go to http://surfer.nmr.mgh.harvard.edu to
  get a valid license file (it's free).
  If you are inside the NMR-Martinos Center,
  make sure to source the standard environment.

"""

I wonder what was the question?  Appreciate for any suggestions.



[http://secure-web.cisco.com/1N7MvMMUAzUFVKiAhFS9HCZFHP0gkEQEMQAsYuTzXoEKRkoOuKB_AhEFB5zdNZFwnwH1DDVYl51OHr_EAEKrId7WN2vAOxQBV-lDKsqXFn_p9CKX_lv11fVyPy5KfbZ23_0OORgctDnyFj7pGLqIWfs0fM6QZL9yLZaurVYO_UIHuoqvLNQwCYuCPv9rJ-E-usUU9SEhYghI_jvtqq1aoADY_Quq9q3OSCPfqOg_5ASng6npTQhe3j2sIudyil2cpJFrsVrjrJwjMkILJ55skNg/http%3A%2F%2Fwww.sysu.edu.cn%2F2012%2Fimages%2Fsysu-mail-logo.png]

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[Freesurfer] Qdec crash while analysis almost finished

2021-01-12 Thread chenbh35 
External Email - Use Caution

Hi, dear Freesurfer experts,




I recently came across an invalid Freesurfer license key error while using 
v5.3, and I tried apply for another license key, it just sent me the same 
license key as I have apply before. Then I put the licence file to 
/usr/local/freesurfer and has changed the name to .license as well. But it 
still doesn't work. Owing to the version I used last time was v6.0, so I 
reinstall a v6.0 and use the same license file. 

But here comes the new problem, when the analysis almost finished, qdec just 
crash and disappear, parts of the contents in the command window are:

""

Writing results
  lh-Avg-Intercept-thickness
maxvox sig=1e+10  F=3846.45  at  index 14 0 0seed=1611502349
  lh-Diff-PCE-CON-Intercept-thickness
maxvox sig=3.52355  F=15.3058  at  index 11472 0 0seed=1611502349
mri_glmfit done
ninputs = 2
Checking inputs
nframestot = 2
Allocing output
Done allocing
nframes = 2
Writing to /media/lava/DATA/ESSAY/FirstWave/qdec/Untitled/contrasts.sig.mgh

--
ERROR: Invalid FreeSurfer license key found in license file 
/usr/local/freesurfer/license.txt
  If you are outside the NMR-Martinos Center,
  go to 
http://secure-web.cisco.com/1l89yx4rr6CbgxQdMiHeY9D8oLAHswLvN7Y1eaaby-Qvn6BVAZuZXwQTAmP0xC7E_rBnRtenwucOyHla0XC9xw2XeIb4JxTVdGUe7DvwQWkZeHZrUqHnr9ytKduEorS6hP5vcMYSHddgx_sm5IuMyMwUIclL1iy7aEMQi4_WDwbqmWFSL9JHrJR0Pi8jESAhxmMm7PAdyF8HtflWq5QA7WU7ccAdPF1EbObmbe9JfgZ9HMqGuzIq5iaG5WpkQHMBFU-RRra2y1iv0boOXppQN-w/http%3A%2F%2Fsurfer.nmr.mgh.harvard.edu
 to 
  get a valid license file (it's free).
  If you are inside the NMR-Martinos Center,
  make sure to source the standard environment.


"""

I wonder what was the question?  Appreciate for any suggestions.___
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer