In FreeView, go to "View/Edit". From the resulting interface, you can
turn on and off any parcellations you want.
On 7/5/2021 1:04 PM, Ellen Ji wrote:
> External Email - Use Caution
>
> Dear experts,
>
> I have a basic visualization question.
> I would like to create a surface brain figure with specific cortical
> parcels colored. Similar to
> https://secure-web.cisco.com/1DryTPj2WrD-LULa8TF6HVh2xwKTLAaWDFvIpAUrs4z6O2VOFttAjezDQX2aR4Z5m6bFRIWk8l6q3Kc0B4K1EjsGa3Ps7AUkb5SPODPx-r-FwnmCtHYHHKbdbpiaWUNhY_vlBvQaG-4Cl9kGxomgOLjtwUjpfxAwjLULtd8raS9pKKnnCsUkx0wW3RSuyX62NEemue5GJ8QZ5J46l4PfzCFjifys8EQeNVKxstOck3xiE-BXhju-kVWs7GQxLXjjk6zMrtaHPswi0sl3CPcqM2A/https%3A%2F%2Fsurfer.nmr.mgh.harvard.edu%2Ffswiki%2FFsTutorial%2FOutputData_freeview%3Faction%3DAttachFile%26do%3Dget%26target%3Dgood_output_aparc_crop.png
> but not with ALL parcels in the atlas selected.
>
> I know that I can go into a subject folder and load this freeview -f
> surf/lh.pial:annot=aparc.annot in order to see the entire Desikan
> Killiany atlas. However, I would like to select 4-5 rois.
>
> What's the best way to do this? It won't be related to any results and
> doesn't need to be from a particular subject's brain (can also be
> fsaverage). It's purely to highlight some cortical parcels for
> visualisation purposes.
>
> Thanks,
> Ellen
>
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