Re: [galaxy-dev] Production environment and Apache's sendfile

2012-04-04 Thread Yuri D'Elia
On Tue, 3 Apr 2012 15:06:05 -0600
Nate Coraor n...@bx.psu.edu wrote:

  If I enable apache_xsendfile, the little eye icon (Display data in 
  browser) on each dataset stops working. I get the following instead:
  
  The requested URL /datasets/7e93e3cf926fb2b3/display/ was not found on this 
  server
  
  My document root is not the same as the galaxy root (as suggested). 
  Everything else seems to work. Is this a bug?
 
 Hi Yuri,
 
 Could you check your Apache error log to see if there's anything relevant 
 there?

Nothing relevant. It seems to be that the sendfile path sent by galaxy to 
apache is simply broken.

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Re: [galaxy-dev] Production environment and Apache's sendfile

2012-04-03 Thread Nate Coraor

On Mar 9, 2012, at 4:12 AM, Yuri D'Elia wrote:

 Hi everyone. I've set up a galaxy production environment and it seems to be 
 working.
 I've identified a couple of issues though:
 
 If I enable apache_xsendfile, the little eye icon (Display data in 
 browser) on each dataset stops working. I get the following instead:
 
 The requested URL /datasets/7e93e3cf926fb2b3/display/ was not found on this 
 server
 
 My document root is not the same as the galaxy root (as suggested). 
 Everything else seems to work. Is this a bug?

Hi Yuri,

Could you check your Apache error log to see if there's anything relevant there?

 Second question:
 
 I want to rotate the galaxy log file (as specified with paster.py serve 
 --log-file. I can't find a way to reopen the logfile in galaxy without taking 
 down the whole service, or a way to redirect the log to a pipe together while 
 using --daemon.
 
 I cannot let the file grow forever.
 Any suggestions?

Unfortunately, there's no way to reopen the log without restarting the process. 
 This is the way we handle our servers.

Thanks,
--nate

 
 Right now I've setup logrotate to copytruncate the log (the log is opened 
 in append anyway), but it's not a very nice solution. Does paster support 
 some standard signal such as SIGUSR1 to re-open log files?
 
 Thanks.
 
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[galaxy-dev] Production environment and Apache's sendfile

2012-03-09 Thread Yuri D'Elia
Hi everyone. I've set up a galaxy production environment and it seems to be 
working.
I've identified a couple of issues though:

If I enable apache_xsendfile, the little eye icon (Display data in browser) 
on each dataset stops working. I get the following instead:

The requested URL /datasets/7e93e3cf926fb2b3/display/ was not found on this 
server

My document root is not the same as the galaxy root (as suggested). Everything 
else seems to work. Is this a bug?

Second question:

I want to rotate the galaxy log file (as specified with paster.py serve 
--log-file. I can't find a way to reopen the logfile in galaxy without taking 
down the whole service, or a way to redirect the log to a pipe together while 
using --daemon.

I cannot let the file grow forever.
Any suggestions?

Right now I've setup logrotate to copytruncate the log (the log is opened in 
append anyway), but it's not a very nice solution. Does paster support some 
standard signal such as SIGUSR1 to re-open log files?

Thanks.

___
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in your mail client.  To manage your subscriptions to this
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