[galaxy-dev] Upload files to a data library - Invalid Paths

2014-06-25 Thread Dooley, Damion 
Hi folks,
In Upload files to a data library form, seems like whatever valid path I 
enter for linking to data on the server, even with galaxy as user and r 
permissions on the folder and files - I get the invalid paths message after 
submitting?  The basic form info:

   ***
   Invalid paths:
   /projects/gia/gia_analysis/blast/homologs_index_Spade_genomes/xml_reports/

   Upload option: Upload files from filesystem paths
   File Format: blastxml

   Paths to upload
   /projects/gia/gia_analysis/blast/homologs_index_Spade_genomes/xml_reports/

   Preserve directory structure?
   [yes or no]

   Copy data into Galaxy?
   Link to files without copying into Galaxy
   ***

Does anyone know a trick to this?  Would be nice to have more helpful error 
explanation here!

My galaxy: 5e605ed6069f+ (stable) release_2014.02.10 .  I think it is a pretty 
normal installation.

Thanks for any tips,

Regards,

Damion

Hsiao lab, BC Public Health Microbiology  Reference Laboratory, BC Centre for 
Disease Control
655 West 12th Avenue, Vancouver, British Columbia, V5Z 4R4 Canada
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Re: [galaxy-dev] Upload files to a data library - Invalid Paths

2014-06-25 Thread Dooley, Damion 
p.s. I do have allow_library_path_paste = True set in universe_wsgi.ini

Damion
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Re: [galaxy-dev] Upload files to a data library - Invalid Paths - Solved

2014-06-25 Thread Dooley, Damion 
Solved.  It was actually a file permissions thing on an ancestral folder.  I 
will add a trello card to suggest slightly better error reporting on this 
though.

Regards,

Damion

Hsiao lab, BC Public Health Microbiology  Reference Laboratory, BC Centre for 
Disease Control
655 West 12th Avenue, Vancouver, British Columbia, V5Z 4R4 Canada

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