[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-20 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16056225#comment-16056225
 ] 

Hudson commented on HBASE-9393:
---

SUCCESS: Integrated in Jenkins build HBase-1.1-JDK8 #1966 (See 
[https://builds.apache.org/job/HBase-1.1-JDK8/1966/])
HBASE-9393 Hbase does not closing a closed socket resulting in many (busbey: 
rev 0aa1343cdb2256ca1b6c7fab6d9ae569ba35e2fc)
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
* (edit) hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java


> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0, 1.3.2, 1.2.7, 1.1.12
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.4.14#64029)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-20 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16056205#comment-16056205
 ] 

Hudson commented on HBASE-9393:
---

SUCCESS: Integrated in Jenkins build HBase-1.1-JDK7 #1883 (See 
[https://builds.apache.org/job/HBase-1.1-JDK7/1883/])
HBASE-9393 Hbase does not closing a closed socket resulting in many (busbey: 
rev 0aa1343cdb2256ca1b6c7fab6d9ae569ba35e2fc)
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java
* (edit) hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java


> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0, 1.3.2, 1.2.7, 1.1.12
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.4.14#64029)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-20 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16056030#comment-16056030
 ] 

Sean Busbey commented on HBASE-9393:


backported to branch-1.1+. Is it worth calling this out in the Hadoop section 
of the ref guide?

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0, 1.3.2, 1.2.7, 1.1.12
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.4.14#64029)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-20 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16055656#comment-16055656
 ] 

Hudson commented on HBASE-9393:
---

SUCCESS: Integrated in Jenkins build HBase-1.2-JDK7 #153 (See 
[https://builds.apache.org/job/HBase-1.2-JDK7/153/])
HBASE-9393 Hbase does not closing a closed socket resulting in many (busbey: 
rev 2bde1ac4050eeaaa262c41459a6590359e69d78c)
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java
* (edit) hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java


> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.4.14#64029)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-20 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16055650#comment-16055650
 ] 

Hudson commented on HBASE-9393:
---

SUCCESS: Integrated in Jenkins build HBase-1.2-JDK8 #149 (See 
[https://builds.apache.org/job/HBase-1.2-JDK8/149/])
HBASE-9393 Hbase does not closing a closed socket resulting in many (busbey: 
rev 2bde1ac4050eeaaa262c41459a6590359e69d78c)
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileScanner.java
* (edit) hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java


> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.4.14#64029)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-20 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16055610#comment-16055610
 ] 

Hudson commented on HBASE-9393:
---

SUCCESS: Integrated in Jenkins build HBase-1.3-JDK7 #183 (See 
[https://builds.apache.org/job/HBase-1.3-JDK7/183/])
HBASE-9393 Hbase does not closing a closed socket resulting in many (busbey: 
rev e3bda837947ad2d49fc59942e062a37124a754dc)
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java
* (edit) hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java


> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.4.14#64029)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-20 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16055597#comment-16055597
 ] 

Hudson commented on HBASE-9393:
---

SUCCESS: Integrated in Jenkins build HBase-1.3-JDK8 #197 (See 
[https://builds.apache.org/job/HBase-1.3-JDK8/197/])
HBASE-9393 Hbase does not closing a closed socket resulting in many (busbey: 
rev e3bda837947ad2d49fc59942e062a37124a754dc)
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java
* (edit) hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java


> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.4.14#64029)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-20 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16055520#comment-16055520
 ] 

Hudson commented on HBASE-9393:
---

SUCCESS: Integrated in Jenkins build HBase-1.2-IT #886 (See 
[https://builds.apache.org/job/HBase-1.2-IT/886/])
HBASE-9393 Hbase does not closing a closed socket resulting in many (busbey: 
rev 2bde1ac4050eeaaa262c41459a6590359e69d78c)
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
* (edit) hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileScanner.java


> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.4.14#64029)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-20 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16055428#comment-16055428
 ] 

Hudson commented on HBASE-9393:
---

SUCCESS: Integrated in Jenkins build HBase-1.3-IT #65 (See 
[https://builds.apache.org/job/HBase-1.3-IT/65/])
HBASE-9393 Hbase does not closing a closed socket resulting in many (busbey: 
rev e3bda837947ad2d49fc59942e062a37124a754dc)
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java
* (edit) hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileScanner.java


> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.4.14#64029)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-15 Thread Mikhail Antonov (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16051162#comment-16051162
 ] 

Mikhail Antonov commented on HBASE-9393:


Missed this one. Yeah, that would be good to get to branch-1.3 [~busbey] - 
thanks!

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.4.14#64029)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-15 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16050909#comment-16050909
 ] 

Sean Busbey commented on HBASE-9393:


I agree, good for backport. [~mantonov] any concerns for branch-1.3?

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.4.14#64029)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-10 Thread Nick Dimiduk (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16045755#comment-16045755
 ] 

Nick Dimiduk commented on HBASE-9393:
-

This does seem like a good fix to backport.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.15#6346)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-06 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16039886#comment-16039886
 ] 

Hudson commented on HBASE-9393:
---

FAILURE: Integrated in Jenkins build HBase-Trunk_matrix #3148 (See 
[https://builds.apache.org/job/HBase-Trunk_matrix/3148/])
HBASE-9393 Hbase does not closing a closed socket resulting in many (apurtell: 
rev 1950acc67a2510be370d6fc7859b562e58070942)
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
* (edit) hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderImpl.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java


> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.15#6346)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-06 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16039823#comment-16039823
 ] 

Hudson commented on HBASE-9393:
---

FAILURE: Integrated in Jenkins build HBase-1.4 #762 (See 
[https://builds.apache.org/job/HBase-1.4/762/])
HBASE-9393 Hbase does not closing a closed socket resulting in many (apurtell: 
rev 356d4e9187fc6748169d3aaebe516fb2257d8835)
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/AbstractHFileReader.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderV2.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/HalfStoreFileReader.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/regionserver/StoreFileScanner.java
* (edit) 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
* (edit) hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java


> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0, 1.4.0
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.15#6346)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-06 Thread Andrew Purtell (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16039523#comment-16039523
 ] 

Andrew Purtell commented on HBASE-9393:
---

Thanks [~ashish singhi]. Will check if the branch-1 failures are repeatable. 
That findbugs warning doesn't come from this patch. Master patch looks good in 
any case. Will commit shortly unless objection

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393-branch-1.patch, HBASE-9393.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v16.patch, HBASE-9393.v16.patch, 
> HBASE-9393.v17.patch, HBASE-9393.v18.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.15#6346)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-06 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16039001#comment-16039001
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 26s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 2m 
9s {color} | {color:green} branch-1 passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 42s 
{color} | {color:green} branch-1 passed with JDK v1.8.0_131 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 43s 
{color} | {color:green} branch-1 passed with JDK v1.7.0_131 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 1m 
0s {color} | {color:green} branch-1 passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
20s {color} | {color:green} branch-1 passed {color} |
| {color:red}-1{color} | {color:red} findbugs {color} | {color:red} 2m 22s 
{color} | {color:red} hbase-server in branch-1 has 1 extant Findbugs warnings. 
{color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 35s 
{color} | {color:green} branch-1 passed with JDK v1.8.0_131 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 40s 
{color} | {color:green} branch-1 passed with JDK v1.7.0_131 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
50s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 39s 
{color} | {color:green} the patch passed with JDK v1.8.0_131 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 39s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 41s 
{color} | {color:green} the patch passed with JDK v1.7.0_131 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 41s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 1m 
2s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
19s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} The patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
17m 49s {color} | {color:green} The patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:green}+1{color} | {color:green} hbaseprotoc {color} | {color:green} 0m 
19s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
37s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed with JDK v1.8.0_131 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 40s 
{color} | {color:green} the patch passed with JDK v1.7.0_131 {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 97m 53s {color} 
| {color:red} hbase-server in the patch failed. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
16s {color} | {color:green} The patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 133m 5s {color} 
| {color:black} {color} |
\\
\\
|| Reason || Tests ||
| Failed junit tests | hadoop.hbase.client.TestReplicasClient |
|   | hadoop.hbase.regionserver.TestAtomicOperation |
\\
\\
|| Subsystem || Report/Notes ||
| Docker | Client=1.12.3 Server=1.12.3 Image:yetus/hbase:395d9a0 |
| JIRA Patch URL | 
https://issues.apache.org/jira/secure/attachment/12871590/HBASE-9393-branch-1.patch
 |
| JIRA Issue | HBASE-9393 |
| Optional Tests |  asflicense  javac  javadoc  unit  findbugs  hadoopcheck  
hbaseanti  checkstyle  compile  |
| uname | Linux 52a043469a39 3.13.0-106-generic #153-Ubuntu SMP Tue Dec 6 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-06 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16038596#comment-16038596
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 15m 9s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 4m 
34s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 46s 
{color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 0m 
53s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
17s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 36s 
{color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
54s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 45s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 45s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 0m 
51s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
18s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} The patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
36m 0s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.6.1 2.6.2 2.6.3 2.6.4 2.6.5 2.7.1 2.7.2 2.7.3 or 3.0.0-alpha2. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
21s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} unit {color} | {color:green} 131m 52s 
{color} | {color:green} hbase-server in the patch passed. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
18s {color} | {color:green} The patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 198m 56s {color} 
| {color:black} {color} |
\\
\\
|| Subsystem || Report/Notes ||
| Docker | Client=1.12.3 Server=1.12.3 Image:yetus/hbase:757bf37 |
| JIRA Patch URL | 
https://issues.apache.org/jira/secure/attachment/12871505/HBASE-9393.v18.patch |
| JIRA Issue | HBASE-9393 |
| Optional Tests |  asflicense  javac  javadoc  unit  findbugs  hadoopcheck  
hbaseanti  checkstyle  compile  |
| uname | Linux f49a50d71c79 4.4.0-43-generic #63-Ubuntu SMP Wed Oct 12 
13:48:03 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux |
| Build tool | maven |
| Personality | 
/home/jenkins/jenkins-slave/workspace/PreCommit-HBASE-Build/component/dev-support/hbase-personality.sh
 |
| git revision | master / 8bfa8aa |
| Default Java | 1.8.0_131 |
| findbugs | v3.0.0 |
|  Test Results | 
https://builds.apache.org/job/PreCommit-HBASE-Build/7093/testReport/ |
| modules | C: hbase-server U: hbase-server |
| Console output | 
https://builds.apache.org/job/PreCommit-HBASE-Build/7093/console |
| Powered by | Apache Yetus 0.3.0   http://yetus.apache.org |


This message was automatically generated.



> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-06 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16038259#comment-16038259
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 11m 43s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 3m 
59s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 44s 
{color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 0m 
52s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
16s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 2s 
{color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 29s 
{color} | {color:green} master passed {color} |
| {color:red}-1{color} | {color:red} mvninstall {color} | {color:red} 0m 25s 
{color} | {color:red} hbase-server in the patch failed. {color} |
| {color:red}-1{color} | {color:red} compile {color} | {color:red} 0m 25s 
{color} | {color:red} hbase-server in the patch failed. {color} |
| {color:red}-1{color} | {color:red} javac {color} | {color:red} 0m 25s {color} 
| {color:red} hbase-server in the patch failed. {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 0m 
47s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
14s {color} | {color:green} the patch passed {color} |
| {color:red}-1{color} | {color:red} whitespace {color} | {color:red} 0m 0s 
{color} | {color:red} The patch has 2 line(s) that end in whitespace. Use git 
apply --whitespace=fix. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 1m 26s 
{color} | {color:red} The patch causes 20 errors with Hadoop v2.6.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 2m 37s 
{color} | {color:red} The patch causes 20 errors with Hadoop v2.6.2. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 3m 50s 
{color} | {color:red} The patch causes 20 errors with Hadoop v2.6.3. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 5m 11s 
{color} | {color:red} The patch causes 20 errors with Hadoop v2.6.4. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 6m 28s 
{color} | {color:red} The patch causes 20 errors with Hadoop v2.6.5. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 7m 49s 
{color} | {color:red} The patch causes 20 errors with Hadoop v2.7.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 9m 8s 
{color} | {color:red} The patch causes 20 errors with Hadoop v2.7.2. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 10m 25s 
{color} | {color:red} The patch causes 20 errors with Hadoop v2.7.3. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 11m 41s 
{color} | {color:red} The patch causes 20 errors with Hadoop v3.0.0-alpha2. 
{color} |
| {color:red}-1{color} | {color:red} findbugs {color} | {color:red} 0m 23s 
{color} | {color:red} hbase-server in the patch failed. {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 30s 
{color} | {color:green} the patch passed {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 0m 29s {color} 
| {color:red} hbase-server in the patch failed. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
9s {color} | {color:green} The patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 35m 25s {color} 
| {color:black} {color} |
\\
\\
|| Subsystem || Report/Notes ||
| Docker | Client=17.03.0-ce Server=17.03.0-ce Image:yetus/hbase:757bf37 |
| JIRA Patch URL | 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-05 Thread Andrew Purtell (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16037204#comment-16037204
 ] 

Andrew Purtell commented on HBASE-9393:
---

Please rebase and make the changes [~busbey] wants to javadoc [~ashish singhi] 
and I will commit this, or if you don't have time please let me know and I'll 
do that to finish it and get it in. 

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v10.patch, 
> HBASE-9393.v11.patch, HBASE-9393.v12.patch, HBASE-9393.v13.patch, 
> HBASE-9393.v14.patch, HBASE-9393.v15.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v16.patch, HBASE-9393.v16.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.15#6346)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-05 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16037096#comment-16037096
 ] 

Sean Busbey commented on HBASE-9393:


I think I still disagree here:

{quote}
bq. The addition of the unbuffer call here means that we need to update the 
javadocs for HFile.createReader(FileSystem, Path, FSDataInputStreamWrapper, 
long, CacheConfig, Configuration) and HFile.createReaderFromStream(Path, 
FSDataInputStream, long, CacheConfig, Configuration) to note that callers need 
to ensure no other threads have access to the passed FSDISW instance.
bq. We should also ensure that existing calls to those methods are safely 
passing the FSDISW instance.

No need, the new reference of FSDISW is just created and passed from this 
methods.
{quote}

This response sounds like the second half of my concern is addressed; we 
currently safely pass FSDISW instances. But without the change to the javadoc 
there's effectively no warning for those who might reuse those methods in the 
future.

I think the need to fix this issue outweighs the risk of future incorrect use 
due to missing the javadoc, so I'm -0.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v10.patch, 
> HBASE-9393.v11.patch, HBASE-9393.v12.patch, HBASE-9393.v13.patch, 
> HBASE-9393.v14.patch, HBASE-9393.v15.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v16.patch, HBASE-9393.v16.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.15#6346)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-05 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16036623#comment-16036623
 ] 

Ashish Singhi commented on HBASE-9393:
--

I can rebase this again if I can get reviews on 3rd April patch ?
We are using this in our customised version for more than one and half years 
and we didn't receive any complaint from this till now. 

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v10.patch, 
> HBASE-9393.v11.patch, HBASE-9393.v12.patch, HBASE-9393.v13.patch, 
> HBASE-9393.v14.patch, HBASE-9393.v15.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v16.patch, HBASE-9393.v16.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.15#6346)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-02 Thread Esteban Gutierrez (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16035435#comment-16035435
 ] 

Esteban Gutierrez commented on HBASE-9393:
--

I don't think there is anything left to do [~apurtell]. Maybe just rebasing the 
patch for branch-1 and master is the only thing left to do. [~busbey] do you 
have any other comment here?

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v10.patch, 
> HBASE-9393.v11.patch, HBASE-9393.v12.patch, HBASE-9393.v13.patch, 
> HBASE-9393.v14.patch, HBASE-9393.v15.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v16.patch, HBASE-9393.v16.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.15#6346)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-02 Thread Andrew Purtell (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16035257#comment-16035257
 ] 

Andrew Purtell commented on HBASE-9393:
---

[~esteban] [~ashish singhi] What are you thinking still needs doing? 
I have this applied on top of 1.3.1 pending deployment to our production later 
this year. We run on a HDFS that supports CanUnbuffer. If you're looking for 
someone to take it over I could do that, since we will be trying it out in 
earnest. 

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v10.patch, 
> HBASE-9393.v11.patch, HBASE-9393.v12.patch, HBASE-9393.v13.patch, 
> HBASE-9393.v14.patch, HBASE-9393.v15.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v16.patch, HBASE-9393.v16.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.15#6346)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-06-02 Thread Esteban Gutierrez (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=16034998#comment-16034998
 ] 

Esteban Gutierrez commented on HBASE-9393:
--

[~ashish singhi] are you still working on this patch?

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v10.patch, 
> HBASE-9393.v11.patch, HBASE-9393.v12.patch, HBASE-9393.v13.patch, 
> HBASE-9393.v14.patch, HBASE-9393.v15.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v16.patch, HBASE-9393.v16.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.15#6346)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-04-03 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15953073#comment-15953073
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 19s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 3m 
29s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 37s 
{color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 0m 
46s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
14s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 
46s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 27s 
{color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
42s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 37s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 37s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 0m 
47s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
14s {color} | {color:green} the patch passed {color} |
| {color:red}-1{color} | {color:red} whitespace {color} | {color:red} 0m 0s 
{color} | {color:red} The patch has 6 line(s) that end in whitespace. Use git 
apply --whitespace=fix. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
27m 36s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.6.1 2.6.2 2.6.3 2.6.4 2.6.5 2.7.1 2.7.2 2.7.3 or 3.0.0-alpha2. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 
56s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 26s 
{color} | {color:green} the patch passed {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 102m 13s 
{color} | {color:red} hbase-server in the patch failed. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
16s {color} | {color:green} The patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 142m 49s {color} 
| {color:black} {color} |
\\
\\
|| Subsystem || Report/Notes ||
| Docker | Client=1.12.3 Server=1.12.3 Image:yetus/hbase:8d52d23 |
| JIRA Patch URL | 
https://issues.apache.org/jira/secure/attachment/12861657/HBASE-9393.v16.patch |
| JIRA Issue | HBASE-9393 |
| Optional Tests |  asflicense  javac  javadoc  unit  findbugs  hadoopcheck  
hbaseanti  checkstyle  compile  |
| uname | Linux aa34e09c1275 3.13.0-107-generic #154-Ubuntu SMP Tue Dec 20 
09:57:27 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux |
| Build tool | maven |
| Personality | 
/home/jenkins/jenkins-slave/workspace/PreCommit-HBASE-Build/component/dev-support/hbase-personality.sh
 |
| git revision | master / 73e1bcd |
| Default Java | 1.8.0_121 |
| findbugs | v3.0.0 |
| whitespace | 
https://builds.apache.org/job/PreCommit-HBASE-Build/6296/artifact/patchprocess/whitespace-eol.txt
 |
| unit | 
https://builds.apache.org/job/PreCommit-HBASE-Build/6296/artifact/patchprocess/patch-unit-hbase-server.txt
 |
|  Test Results | 
https://builds.apache.org/job/PreCommit-HBASE-Build/6296/testReport/ |
| modules | C: hbase-server U: hbase-server |
| Console output | 
https://builds.apache.org/job/PreCommit-HBASE-Build/6296/console |
| Powered by | Apache Yetus 0.3.0   http://yetus.apache.org |


This message was automatically generated.



> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-03-31 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15950785#comment-15950785
 ] 

Ashish Singhi commented on HBASE-9393:
--

Attached patch v16 for further reviews. Once the master branch patch is 
accepted I will attach patches for other branches.
Response to [~busbey] comments,
{quote}
The addition of the unbuffer call here means that we need to update the 
javadocs for HFile.createReader(FileSystem, Path, FSDataInputStreamWrapper, 
long, CacheConfig, Configuration) and HFile.createReaderFromStream(Path, 
FSDataInputStream, long, CacheConfig, Configuration) to note that callers need 
to ensure no other threads have access to the passed FSDISW instance.
We should also ensure that existing calls to those methods are safely passing 
the FSDISW instance.
{quote}
No need, the new reference of FSDISW is just created and passed from this 
methods.

{quote}
Just want to make sure I'm following the rationale correctly here. This won't 
actually take care of unbuffering if the lock is held e.g. for reading. I think 
this is fine, since it implies someone else is still using the stream and 
presumably they will also attempt to unbuffer when they are done.
{quote}
Yes.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v10.patch, 
> HBASE-9393.v11.patch, HBASE-9393.v12.patch, HBASE-9393.v13.patch, 
> HBASE-9393.v14.patch, HBASE-9393.v15.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v16.patch, HBASE-9393.v1.patch, HBASE-9393.v2.patch, 
> HBASE-9393.v3.patch, HBASE-9393.v4.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v7.patch, 
> HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.15#6346)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-01-16 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15825501#comment-15825501
 ] 

Ashish Singhi commented on HBASE-9393:
--

Will get back to this very soon with patches for all the versions.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v10.patch, 
> HBASE-9393.v11.patch, HBASE-9393.v12.patch, HBASE-9393.v13.patch, 
> HBASE-9393.v14.patch, HBASE-9393.v15.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v1.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-01-16 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15824679#comment-15824679
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 19s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 3m 
52s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 47s 
{color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 0m 
56s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
17s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 36s 
{color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
55s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 47s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 47s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 0m 
49s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} The patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
31m 47s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.6.1 2.6.2 2.6.3 2.6.4 2.6.5 2.7.1 2.7.2 2.7.3 or 3.0.0-alpha1. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 9s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} unit {color} | {color:green} 101m 31s 
{color} | {color:green} hbase-server in the patch passed. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
16s {color} | {color:green} The patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 148m 28s {color} 
| {color:black} {color} |
\\
\\
|| Subsystem || Report/Notes ||
| Docker | Client=1.11.2 Server=1.11.2 Image:yetus/hbase:8d52d23 |
| JIRA Patch URL | 
https://issues.apache.org/jira/secure/attachment/12794484/HBASE-9393.v15.patch |
| JIRA Issue | HBASE-9393 |
| Optional Tests |  asflicense  javac  javadoc  unit  findbugs  hadoopcheck  
hbaseanti  checkstyle  compile  |
| uname | Linux 97ef674eb251 3.13.0-105-generic #152-Ubuntu SMP Fri Dec 2 
15:37:11 UTC 2016 x86_64 x86_64 x86_64 GNU/Linux |
| Build tool | maven |
| Personality | 
/home/jenkins/jenkins-slave/workspace/PreCommit-HBASE-Build/component/dev-support/hbase-personality.sh
 |
| git revision | master / 4cb09a4 |
| Default Java | 1.8.0_111 |
| findbugs | v3.0.0 |
|  Test Results | 
https://builds.apache.org/job/PreCommit-HBASE-Build/5281/testReport/ |
| modules | C: hbase-server U: hbase-server |
| Console output | 
https://builds.apache.org/job/PreCommit-HBASE-Build/5281/console |
| Powered by | Apache Yetus 0.3.0   http://yetus.apache.org |


This message was automatically generated.



> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
>

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2017-01-16 Thread Ted Yu (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15824530#comment-15824530
 ] 

Ted Yu commented on HBASE-9393:
---

[~ashish singhi]:
Can you attach patch backported to branch-1.2 ?

Thanks

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v10.patch, 
> HBASE-9393.v11.patch, HBASE-9393.v12.patch, HBASE-9393.v13.patch, 
> HBASE-9393.v14.patch, HBASE-9393.v15.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v1.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-09-07 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15472782#comment-15472782
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 15s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 3m 
3s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 32s 
{color} | {color:green} master passed with JDK v1.8.0_101 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 35s 
{color} | {color:green} master passed with JDK v1.7.0_111 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 0m 
50s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 0s 
{color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 26s 
{color} | {color:green} master passed with JDK v1.8.0_101 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 34s 
{color} | {color:green} master passed with JDK v1.7.0_111 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
47s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed with JDK v1.8.0_101 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 36s 
{color} | {color:green} the patch passed with JDK v1.7.0_111 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 36s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 0m 
50s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} The patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
28m 2s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:green}+1{color} | {color:green} hbaseprotoc {color} | {color:green} 0m 
15s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
18s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 30s 
{color} | {color:green} the patch passed with JDK v1.8.0_101 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 36s 
{color} | {color:green} the patch passed with JDK v1.7.0_111 {color} |
| {color:green}+1{color} | {color:green} unit {color} | {color:green} 94m 50s 
{color} | {color:green} hbase-server in the patch passed. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
17s {color} | {color:green} The patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 138m 46s {color} 
| {color:black} {color} |
\\
\\
|| Subsystem || Report/Notes ||
| Docker | Client=1.11.2 Server=1.11.2 Image:yetus/hbase:date2016-09-08 |
| JIRA Patch URL | 
https://issues.apache.org/jira/secure/attachment/12794484/HBASE-9393.v15.patch |
| JIRA Issue | HBASE-9393 |
| Optional Tests |  asflicense  javac  javadoc  unit  findbugs  hadoopcheck  
hbaseanti  checkstyle  compile  |
| uname | Linux 2fcb24bf9520 3.13.0-36-lowlatency #63-Ubuntu SMP PREEMPT Wed 
Sep 3 21:56:12 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux |
| Build tool | maven |
| Personality | 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-17 Thread Vladimir Rodionov (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15337251#comment-15337251
 ] 

Vladimir Rodionov commented on HBASE-9393:
--

That was our root cause:
https://issues.apache.org/jira/browse/HBASE-16062

in combination with a bad name for WAL splitter class in some old files. RS 
could not instantiate WAL Readers for such files and did not handle error 
correctly leaving hanging socket  in CLOSE_WAIT state.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-16 Thread Vladimir Rodionov (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15334461#comment-15334461
 ] 

Vladimir Rodionov commented on HBASE-9393:
--

Some stats from env:

# 15 node cluster / 11 for HBase
# HBASE 1.1.2.x (HDP 2.4.2)
# Phoenix
# 5500 regions
# 2844 (!)  tables
3860 (!) snapshots
# Kerberos
# UI shows 3 dead regions, which are not dead
# They run M/R jobs (Phoenix), M/R jobs (with direct HFiles access), Storm and 
Flume application writes to HBase
# Number of files: archive - 7320, data - 43349, rest dirs are small
# All CLOSE_WAIT connections are bound to remote nodes on 1019 port (Kerberized 
DN?)
# Distribution of CLOSE_WAIT socket is very uneven: 011 server has 59K, 006 has 
less than 1K
# Enabling / disabling tables does not make any positive effect on # of 
CLOSE_WAIT connections. 

The number of CLOSE_WAIT connections grows steadily over time, it reached 60K 
on oo1 node in less than 24 hours.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-15 Thread Chris Nauroth (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15332014#comment-15332014
 ] 

Chris Nauroth commented on HBASE-9393:
--

[~vinayrpet], I apologize.  I re-reviewed this code, and you are correct.  
Please disregard my prior comment.  Thanks for checking on this.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-15 Thread Vladimir Rodionov (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15331960#comment-15331960
 ] 

Vladimir Rodionov commented on HBASE-9393:
--

{quote}
We see this issue in one of our customer's installation. HBase 1.1.2 (hdfs - 
2.5.1). 
{quote}

Correction: hdfs-2.7.1

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-15 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15331941#comment-15331941
 ] 

Sean Busbey commented on HBASE-9393:


{code}
diff --git 
a/hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
 
b/hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
index b06be6b..4f9e96e 100644
--- 
a/hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
+++ 
b/hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java
...
+  private volatile Boolean instanceOfCanUnbuffer = null;
+  // Using reflection to get org.apache.hadoop.fs.CanUnbuffer#unbuffer method 
to avoid compilation
+  // errors against Hadoop pre 2.6.4 and 2.7.1 versions.
+  private volatile Method unbuffer = null;
+
{code}

AFAICT, these are only used in the {{unbuffer}} method. That method declares 
itself not threadsafe, so why are these volatile?

{code}
@@ -493,8 +499,8 @@ public class HFile {
*/
   
@edu.umd.cs.findbugs.annotations.SuppressWarnings(value="SF_SWITCH_FALLTHROUGH",
   justification="Intentional")
-  private static Reader pickReaderVersion(Path path, FSDataInputStreamWrapper 
fsdis,
-  long size, CacheConfig cacheConf, HFileSystem hfs, Configuration conf) 
throws IOException {
+  private static Reader openReader(Path path, FSDataInputStreamWrapper fsdis, 
long size,
+  CacheConfig cacheConf, HFileSystem hfs, Configuration conf) throws 
IOException {
 FixedFileTrailer trailer = null;
 try {
   boolean isHBaseChecksum = fsdis.shouldUseHBaseChecksum();
@@ -516,6 +522,8 @@ public class HFile {
 LOG.warn("Error closing fsdis FSDataInputStreamWrapper", t2);
   }
   throw new CorruptHFileException("Problem reading HFile Trailer from file 
" + path, t);
+} finally {
+  fsdis.unbuffer();
 }
   }
{code}

The addition of the unbuffer call here means that we need to update the 
javadocs for {{HFile.createReader(FileSystem, Path, FSDataInputStreamWrapper, 
long, CacheConfig, Configuration)}} and {{HFile.createReaderFromStream(Path, 
FSDataInputStream, long, CacheConfig, Configuration)}} to note that callers 
need to ensure no other threads have access to the passed FSDISW instance.

We should also ensure that existing calls to those methods are safely passing 
the FSDISW instance.

{code}
diff --git 
a/hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java 
b/hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
index 6268f2e..a68900a 100644
--- 
a/hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
+++ 
b/hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
@@ -1351,6 +1351,12 @@ public class HFileBlock implements Cacheable {
 
 void setIncludesMemstoreTS(boolean includesMemstoreTS);
 void setDataBlockEncoder(HFileDataBlockEncoder encoder);
+
+/**
+ * To close the stream's socket. Note: This can be concurrently called 
from multiple threads and
+ * implementation should take care of thread safety
+ */
+void unbufferStream();
   }
 
   /**
@@ -1817,6 +1823,19 @@ public class HFileBlock implements Cacheable {
 public String toString() {
   return "hfs=" + hfs + ", path=" + pathName + ", fileContext=" + 
fileContext;
 }
+
+@Override
+public void unbufferStream() {
+  // To handle concurrent reads, ensure that no other client is accessing 
the streams while we
+  // unbuffer it.
+  if (streamLock.tryLock()) {
+try {
+  this.streamWrapper.unbuffer();
+} finally {
+  streamLock.unlock();
+}
+  }
+}
{code}

Just want to make sure I'm following the rationale correctly here. This won't 
actually take care of unbuffering if the lock is held e.g. for reading. I think 
this is fine, since it implies someone else is still using the stream and 
presumably they will also attempt to unbuffer when they are done.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-15 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15331905#comment-15331905
 ] 

Sean Busbey commented on HBASE-9393:


Okay, I'm rereading the comments and I'll re-review v15 to see if I still hold 
my same concerns over proper docs / usage for concurrency.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-15 Thread Vinayakumar B (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15331410#comment-15331410
 ] 

Vinayakumar B commented on HBASE-9393:
--

Its correct that file descriptors will be shared. But from the Latest branch-2 
code I can see that, sharing happens via DomainSocket, not TCP socket. Didn't 
check what was exactly available in 2.5.1.
{code}new Sender(out).requestShortCircuitFds(block, token, slotId, 1,
failureInjector.getSupportsReceiptVerification());
DataInputStream in = new DataInputStream(peer.getInputStream());
BlockOpResponseProto resp = BlockOpResponseProto.parseFrom(
PBHelperClient.vintPrefixed(in));
DomainSocket sock = peer.getDomainSocket();
failureInjector.injectRequestFileDescriptorsFailure();
switch (resp.getStatus()) {
case SUCCESS:
  byte buf[] = new byte[1];
  FileInputStream[] fis = new FileInputStream[2];
  sock.recvFileInputStreams(fis, buf, 0, buf.length);{code}

Will this also count for CLOSE_WAITs? I dont think so.

If legacy local reader (BlockReaderLocalLegacy) is used, sharing of Block/meta 
file information was via IPC port, not data port. 

Am I missing something here?

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-15 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15331342#comment-15331342
 ] 

Ashish Singhi commented on HBASE-9393:
--

Thanks for the knowledge sharing.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-15 Thread Anoop Sam John (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15331234#comment-15331234
 ] 

Anoop Sam John commented on HBASE-9393:
---

Thanks..
We should get this work in.  Seems many users get this issue here and there.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-15 Thread Chris Nauroth (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15331202#comment-15331202
 ] 

Chris Nauroth commented on HBASE-9393:
--

With short-circuit read, there is still a brief interaction between the HDFS 
client and the DataNode's data transfer port to request sharing file 
descriptors to perform the direct read.  It's much less data compared to an 
actual block transfer, but the TCP socket is still there.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-14 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15331195#comment-15331195
 ] 

Ashish Singhi commented on HBASE-9393:
--

I think If scr is enabled then there will not be any socket connection to DN 
port. The sockets in CLOSE_WAIT's are connected to which port then ?

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-14 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15330965#comment-15330965
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 3m 
45s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 51s 
{color} | {color:green} master passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 36s 
{color} | {color:green} master passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 0m 
54s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
15s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 2s 
{color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 42s 
{color} | {color:green} master passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 37s 
{color} | {color:green} master passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
50s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 53s 
{color} | {color:green} the patch passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 53s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 37s 
{color} | {color:green} the patch passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 36s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 1m 
15s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
16s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
27m 2s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
25s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 41s 
{color} | {color:green} the patch passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 36s 
{color} | {color:green} the patch passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} unit {color} | {color:green} 90m 26s 
{color} | {color:green} hbase-server in the patch passed. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
20s {color} | {color:green} Patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 135m 29s {color} 
| {color:black} {color} |
\\
\\
|| Subsystem || Report/Notes ||
| JIRA Patch URL | 
https://issues.apache.org/jira/secure/attachment/12794484/HBASE-9393.v15.patch |
| JIRA Issue | HBASE-9393 |
| Optional Tests |  asflicense  javac  javadoc  unit  findbugs  hadoopcheck  
hbaseanti  checkstyle  compile  |
| uname | Linux asf906.gq1.ygridcore.net 3.13.0-36-lowlatency #63-Ubuntu SMP 
PREEMPT Wed Sep 3 21:56:12 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux |
| Build tool | maven |
| Personality | 
/home/jenkins/jenkins-slave/workspace/PreCommit-HBASE-Build/component/dev-support/hbase-personality.sh
 |
| git revision | master / b69c77a |
| Default Java | 1.7.0_79 |
| Multi-JDK versions |  /home/jenkins/tools/java/jdk1.8.0:1.8.0 
/usr/local/jenkins/java/jdk1.7.0_79:1.7.0_79 |
| findbugs | 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-06-14 Thread Vladimir Rodionov (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15330678#comment-15330678
 ] 

Vladimir Rodionov commented on HBASE-9393:
--

We see this issue in one of our customer's installation. HBase 1.1.2 (hdfs - 
2.5.1). One question:

If we have scr enabled (no socket access, direct reads), how it is possible to 
get into thousands of sockets in CLOSE_WAIT states in RS? I read all this 
thread but found no explanation, may be I missed something. 

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-05-05 Thread Chris Nauroth (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15272836#comment-15272836
 ] 

Chris Nauroth commented on HBASE-9393:
--

Does the above question amount to asking whether or not it is safe for multiple 
threads to read concurrently from a {{DFSInputStream}}?  If so, then I can 
provide some feedback.

One case to consider is positional read, which is the following method 
signature:

{code}
int read(long position, byte[] buffer, int offset, int length) throws 
IOException;
{code}

If all calling threads are using positional read, then it's correct that each 
caller would operate on its own unique instance of {{BlockReader}}, backed by 
its own dedicated socket connection to a DataNode.

Another case to consider is any of the other non-positional read APIs.  These 
APIs are thread-safe at the method level via {{synchronized}}, however that's 
not sufficient to guarantee isolation for a sequence of multiple method calls, 
such as {{seek}} + {{read}} or {{skip}} + {{read}}.  That would require 
external synchronization.  Even with external synchronization, there would be a 
risk of thrashing if multiple threads were trying to read drastically different 
positions spanning block boundaries.  The {{DFSInputStream}} would have to keep 
updating its single {{BlockReader}} instance and related state to point at the 
new position.  That amounts to additional NameNode RPC and connection 
reestablishment to a DataNode (unless a cached connection is available).

Caveat: I don't know HBase code well enough to comment authoritatively on its 
usage patterns.  If HBase code additionally relies on locking the stream 
objects for mutual exclusion around its own higher-level operations, then 
that's another concern.

I hope this helps.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-05-04 Thread Ted Yu (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15271615#comment-15271615
 ] 

Ted Yu commented on HBASE-9393:
---

[~busbey]:
What do you think of Ashish's response ?

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0, 1.0.1.1, 1.1.2
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-27 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15213842#comment-15213842
 ] 

Ashish Singhi commented on HBASE-9393:
--

I replied to them in my above comment. It is not mandatory to call them in a 
lock so only I did not add any specific javadoc for it.
{quote}
bq. This call means that openReader can only be called within a lock for fsdis. 
The javadocs should say so. (do all uses already do this?)
bq. This call means that createReader(FileSystem, Path, 
FSDataInputStreamWrapper, long, CacheConfig, Configuration) can only be called 
within a lock for fsdis, javadocs should say so. (do all uses already do this?)
As per my knowledge the concurrent thing is already handled in HDFS. Each 
client will have its own BlockReader and socket, so if the first client 
unbuffer the socket also it will not cause any problem to the other client 
block reads.
{quote}

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-25 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15211834#comment-15211834
 ] 

Sean Busbey commented on HBASE-9393:


I don't see these previous javadoc and verification requests handled in v15:

{quote}
{code}
+} finally {
+  fsdis.unbuffer();
 }
{code}
This call means that {{openReader}} can only be called within a lock for 
{{fsdis}}. The javadocs should say so. (do all uses already do this?)
{code}
@@ -543,7 +550,7 @@ public class HFile {
 } else {
   hfs = (HFileSystem)fs;
 }
-return pickReaderVersion(path, fsdis, size, cacheConf, hfs, conf);
+return openReader(path, fsdis, size, cacheConf, hfs, conf);
   }
{code}
This call means that {{createReader(FileSystem, Path, FSDataInputStreamWrapper, 
long, CacheConfig, Configuration)}} can only be called within a lock for 
{{fsdis}}, javadocs should say so. (do all uses already do this?)
{quote}

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-25 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15211711#comment-15211711
 ] 

Ashish Singhi commented on HBASE-9393:
--

[~busbey], can you take a look at v15 patch.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v15.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-21 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15204084#comment-15204084
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 5m 
37s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 1m 14s 
{color} | {color:green} master passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 43s 
{color} | {color:green} master passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
56s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
20s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
20s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 44s 
{color} | {color:green} master passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 43s 
{color} | {color:green} master passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
53s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 1m 2s 
{color} | {color:green} the patch passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 1m 2s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 33s 
{color} | {color:green} the patch passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 33s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 5m 
59s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
31s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
32m 48s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
32s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 44s 
{color} | {color:green} the patch passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 41s 
{color} | {color:green} the patch passed with JDK v1.7.0_79 {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 142m 37s 
{color} | {color:red} hbase-server in the patch failed. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
27s {color} | {color:green} Patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 206m 0s {color} 
| {color:black} {color} |
\\
\\
|| Reason || Tests ||
| Timed out junit tests | 
org.apache.hadoop.hbase.master.procedure.TestMasterFailoverWithProcedures |
|   | org.apache.hadoop.hbase.snapshot.TestFlushSnapshotFromClient |
\\
\\
|| Subsystem || Report/Notes ||
| JIRA Patch URL | 
https://issues.apache.org/jira/secure/attachment/12794484/HBASE-9393.v15.patch |
| JIRA Issue | HBASE-9393 |
| Optional Tests |  asflicense  javac  javadoc  unit  findbugs  hadoopcheck  
hbaseanti  checkstyle  compile  |
| uname | Linux asf909.gq1.ygridcore.net 3.13.0-36-lowlatency #63-Ubuntu SMP 
PREEMPT Wed Sep 3 21:56:12 UTC 2014 x86_64 x86_64 x86_64 GNU/Linux |
| Build tool | maven |
| Personality | 
/home/jenkins/jenkins-slave/workspace/PreCommit-HBASE-Build/component/dev-support/hbase-personality.sh
 |
| 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-19 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15197886#comment-15197886
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 3m 
5s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 37s 
{color} | {color:green} master passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 32s 
{color} | {color:green} master passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
12s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 
52s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 25s 
{color} | {color:green} master passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s 
{color} | {color:green} master passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
43s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 39s 
{color} | {color:green} the patch passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 39s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
45s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
18s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
29m 32s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
42s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 29s 
{color} | {color:green} the patch passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 38s 
{color} | {color:green} the patch passed with JDK v1.7.0_79 {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 109m 1s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.8.0. {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 82m 34s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.7.0_79. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
27s {color} | {color:green} Patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 244m 30s {color} 
| {color:black} {color} |
\\
\\
|| Reason || Tests ||
| JDK v1.8.0 Timed out junit tests | 
org.apache.hadoop.hbase.master.procedure.TestServerCrashProcedure |
|   | org.apache.hadoop.hbase.master.TestGetLastFlushedSequenceId |
|   | org.apache.hadoop.hbase.master.balancer.TestStochasticLoadBalancer2 |
|   | org.apache.hadoop.hbase.master.TestMasterFailover |
|   | org.apache.hadoop.hbase.util.TestHBaseFsckOneRS |
|   | org.apache.hadoop.hbase.mapred.TestTableInputFormat |
|   | org.apache.hadoop.hbase.wal.TestWALFiltering |
|   | org.apache.hadoop.hbase.mapred.TestTableMapReduceUtil |
|   | 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-19 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15197254#comment-15197254
 ] 

Ashish Singhi commented on HBASE-9393:
--

Thanks for the comments [~busbey]. Sorry for the late response.

bq. Can we do the initialization in the constructor (and make the related 
instance variables final) rather than rely on doing this lazy initialization?
We cannot make them final as the variables value are set at two different 
places in the method based on the condition and java compiler will not allow 
for that if we make it final.

bq. Can we catch specific exceptions instead of Exception?
Addressed.

bq. this doesn't need to reference the JIRA (both instances). Should specify 
that implementers should make it threadsafe (since we use it without locks in 
various places)
Addressed.

bq. This call means that openReader can only be called within a lock for fsdis. 
The javadocs should say so. (do all uses already do this?)

bq. This call means that createReader(FileSystem, Path, 
FSDataInputStreamWrapper, long, CacheConfig, Configuration) can only be called 
within a lock for fsdis, javadocs should say so. (do all uses already do this?)

As per my knowledge the concurrent thing is already handled in HDFS. Each 
client will have its own BlockReader and socket, so if the first client 
unbuffer the socket also it will not cause any problem to the other client 
block reads.

Please review and let me know your thoughts.
Thanks.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v15.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-04 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15181382#comment-15181382
 ] 

Sean Busbey commented on HBASE-9393:


Can we do the initialization in the constructor (and make the related instance 
variables final) rather than rely on doing this lazy initialization?

{code}
+} catch (Exception e) {
+  LOG.warn("Failed to find 'unbuffer' method in class " + 
streamClass
+  + " . So there may be a TCP socket connection "
+  + "left open in CLOSE_WAIT state.", e);
+  return;
+}
{code}

Can we catch specific exceptions instead of {{Exception}}?

{code}
+
+/**
+ * To close the stream's socket. HBASE-9393
+ */
+void unbufferStream();
{code}

this doesn't need to reference the JIRA (both instances). Should specify that 
implementers should make it threadsafe (since we use it without locks in 
various places)

{code}
+} finally {
+  fsdis.unbuffer();
 }
{code}

This call means that {{openReader}} can only be called within a lock for 
{{fsdis}}. The javadocs should say so. (do all uses already do this?)

{code}
@@ -543,7 +550,7 @@ public class HFile {
 } else {
   hfs = (HFileSystem)fs;
 }
-return pickReaderVersion(path, fsdis, size, cacheConf, hfs, conf);
+return openReader(path, fsdis, size, cacheConf, hfs, conf);
   }
{code}

This call means that {{createReader(FileSystem, Path, FSDataInputStreamWrapper, 
long, CacheConfig, Configuration)}} can only be called within a lock for fsdis, 
javadocs should say so. (do all uses already do this?)



> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v2.patch, 
> HBASE-9393.v3.patch, HBASE-9393.v4.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v7.patch, 
> HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-03 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15179488#comment-15179488
 ] 

Ashish Singhi commented on HBASE-9393:
--

[~anoop.hbase], [~busbey], can you please review the latest patch ?

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v2.patch, 
> HBASE-9393.v3.patch, HBASE-9393.v4.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v7.patch, 
> HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-03 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15178607#comment-15178607
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 3m 
3s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 46s 
{color} | {color:green} master passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 31s 
{color} | {color:green} master passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
35s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
15s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 
50s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 28s 
{color} | {color:green} master passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 35s 
{color} | {color:green} master passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
45s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 50s 
{color} | {color:green} the patch passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 50s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 35s 
{color} | {color:green} the patch passed with JDK v1.7.0_79 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 35s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
35s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
16s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
24m 36s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 7s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 25s 
{color} | {color:green} the patch passed with JDK v1.8.0 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed with JDK v1.7.0_79 {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 84m 24s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.8.0. {color} |
| {color:green}+1{color} | {color:green} unit {color} | {color:green} 88m 17s 
{color} | {color:green} hbase-server in the patch passed with JDK v1.7.0_79. 
{color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
16s {color} | {color:green} Patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 220m 11s {color} 
| {color:black} {color} |
\\
\\
|| Reason || Tests ||
| JDK v1.8.0 Timed out junit tests | 
org.apache.hadoop.hbase.master.balancer.TestStochasticLoadBalancer2 |
|   | 
org.apache.hadoop.hbase.replication.regionserver.TestRegionReplicaReplicationEndpoint
 |
|   | org.apache.hadoop.hbase.filter.TestFilterWithScanLimits |
|   | org.apache.hadoop.hbase.constraint.TestConstraint |
|   | org.apache.hadoop.hbase.master.TestAssignmentListener |
|   | org.apache.hadoop.hbase.master.cleaner.TestSnapshotFromMaster |
|   | org.apache.hadoop.hbase.master.TestSplitLogManager |
|   | 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-02 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15177302#comment-15177302
 ] 

Ashish Singhi commented on HBASE-9393:
--

Test failures are not related to patch.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v14.patch, HBASE-9393.v2.patch, 
> HBASE-9393.v3.patch, HBASE-9393.v4.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v7.patch, 
> HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-02 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15175847#comment-15175847
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 0s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 3m 
40s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 1m 15s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 59s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 5m 
31s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
27s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
45s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 55s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 59s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 1m 
14s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 1m 20s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 1m 20s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 57s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 57s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 5m 
3s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
27s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
29m 17s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
24s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 35s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 38s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 25m 9s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.8.0_72. {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 82m 4s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.7.0_95. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
27s {color} | {color:green} Patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 166m 46s {color} 
| {color:black} {color} |
\\
\\
|| Reason || Tests ||
| JDK v1.8.0_72 Failed junit tests | hadoop.hbase.ipc.TestSimpleRpcScheduler |
| JDK v1.7.0_95 Timed out junit tests | 
org.apache.hadoop.hbase.regionserver.TestCorruptedRegionStoreFile |
|   | org.apache.hadoop.hbase.regionserver.TestSplitLogWorker |
|   | org.apache.hadoop.hbase.regionserver.compactions.TestFIFOCompactionPolicy 
|
|   | org.apache.hadoop.hbase.regionserver.wal.TestFSHLog |
|   | 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-02 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15175560#comment-15175560
 ] 

Ashish Singhi commented on HBASE-9393:
--

bq. Are the characteristics of stream something we can determine in a static 
initializer from configs, perhaps by instantiating a dummy version?
No we cannot do that way. I checked the code and the same is stated in the 
javadoc
{noformat}
  /** Two stream handles, one with and one without FS-level checksum.
   * HDFS checksum setting is on FS level, not single read level, so you have 
to keep two
   * FS objects and two handles open to interleave different reads freely, 
which is very sad.
   * This is what we do:
   * 1) First, we need to read the trailer of HFile to determine checksum 
parameters.
   *  We always use FS checksum to do that, so ctor opens {@link #stream}.
   * 2.1) After that, if HBase checksum is not used, we'd just always use 
{@link #stream};
   * 2.2) If HBase checksum can be used, we'll open {@link #streamNoFsChecksum},
   *  and close {@link #stream}. User MUST call prepareForBlockReader for that 
to happen;
   *  if they don't, (2.1) will be the default.
   * 3) The users can call {@link #shouldUseHBaseChecksum()}, and pass its 
result to
   *  {@link #getStream(boolean)} to get stream (if Java had out/pointer params 
we could
   *  return both in one call). This stream is guaranteed to be set.
   * 4) The first time HBase checksum fails, one would call {@link 
#fallbackToFsChecksum(int)}.
   * That will take lock, and open {@link #stream}. While this is going on, 
others will
   * continue to use the old stream; if they also want to fall back, they'll 
also call
   * {@link #fallbackToFsChecksum(int)}, and block until {@link #stream} is set.
   * 5) After some number of checksumOk() calls, we will go back to using HBase 
checksum.
   * We will have 2 handles; however we presume checksums fail so rarely that 
we don't care.
   */
{noformat}
The value of hbase checksum and stream will be used cannot be determined in a 
static initializer. I think unbuffer method type should be a instance variable 
and cannot be shared.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-03-01 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15173681#comment-15173681
 ] 

Ashish Singhi commented on HBASE-9393:
--

Thanks for the comments [~busbey] and [~anoop.hbase].
Sorry for my absence here, I was not keeping well from last few days.
Will check the comments in detail and get back on this tomorrow (IST).

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-29 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15171987#comment-15171987
 ] 

Sean Busbey commented on HBASE-9393:


{quote}
The static boolean tells whether the underlying FS supports unbuffer call or 
not. Depending on the useHBaseChecksum and stream it wont change.. So there is 
no confusion as such abt this.
{quote}

But this is static across all instances in the same JVM. if it "depends on the 
stream" then that means we can't have a single static instance unless we know 
all the streams will be the same. If they'll all be the same, then we can do 
this in a static initializer.

{quote}
Regarding the init of the static boolean, IMHO there is no need to worry abt 
the multi thread. We dont want every op to do the interfaces listing and check 
(String op). Even if, at begin, 2 threads do it parallely, its ok. Both will 
give same result only.
{quote}

This is not true. The current code is not threadsafe and will fail in some 
cases. If we can't do this in a static initializer or otherwise assure that hte 
code itself will be threadsafe, then we need to mark the method as not thread 
safe (similar to he current non-threadsafe portion of this class) and then we 
need to ensure that it is only called within proper fencing _across all 
instance the same JVM_.


To be clear, I am currently -1 for thread safety incorrectness.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-29 Thread Anoop Sam John (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15171696#comment-15171696
 ] 

Anoop Sam John commented on HBASE-9393:
---

bq.can useHBaseChecksum vary amongst instances in the same JVM? if it can, then 
we shouldn't be sharing cached information about the unbuffer call at all (or 
we need to have one of them per streamClass). That would solve the "assign to 
static" business by moving to per-instance caches of the reflection information.
The static boolean tells whether the underlying FS supports unbuffer call or 
not. Depending on the useHBaseChecksum and stream it wont change.. So there is 
no confusion as such abt this.
Regarding the init of the static boolean, IMHO there is no need to worry abt 
the multi thread.  We dont want every op to do the interfaces listing and check 
(String op).  Even if, at begin, 2 threads do it parallely, its ok.  Both will 
give same result only.  Pls add proper comments here. And no need to add extra 
things to get away with findbugs warn.  Write clearly why no worry abt findbugs 
comment here and we can add ignore annotate for the findbugs so that it wont 
list this comment.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-25 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15167543#comment-15167543
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 0s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 2m 
55s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 32s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 34s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
19s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 
50s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 26s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 33s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
45s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
20s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
16s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
23m 44s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 
59s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 25s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 13m 28s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.8.0_72. {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 15m 35s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.7.0_95. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
11s {color} | {color:green} Patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 74m 17s {color} 
| {color:black} {color} |
\\
\\
|| Reason || Tests ||
| JDK v1.8.0_72 Failed junit tests | hadoop.hbase.ipc.TestRpcMetrics |
|   | hadoop.hbase.regionserver.TestMetricsRegionServer |
|   | hadoop.hbase.regionserver.TestMetricsRegion |
| JDK v1.7.0_95 Failed junit tests | hadoop.hbase.ipc.TestRpcMetrics |
|   | hadoop.hbase.regionserver.TestMetricsRegionServer |
|   | hadoop.hbase.regionserver.TestMetricsRegion |
\\
\\
|| Subsystem || Report/Notes ||
| Docker | Client=1.9.1 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-25 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15167369#comment-15167369
 ] 

Sean Busbey commented on HBASE-9393:


{quote}
bq. Why are we making these assignments indirectly via methods?
To handle the findbugs warnings ST_WRITE_TO_STATIC_FROM_INSTANCE_METHOD: Write 
to static field from instance method.
{quote}

But these methods have the same underlying problem: we're unsafely updating 
from multiple instance locations.

{quote}
bq. This doesn't look like it will behave correctly in presence of concurrency. 
Can we do the reflection set up during a static initializer?
Intial plan was to do that way and do this set up only once (which we still do 
only once in the patch) but then the stream is a instance object so could not 
do that way. Regarding concurrency we have handled that, the parallel reads 
will come through HFileBlock reads and there we acquiring the stream lock and 
then call the stream unbuffer, same as we do the for the block reads.
{quote}

There's nothing in this class that lets anyone know that this method must be 
accessed within a lock. The top level class description even claims that it is 
threadsafe for normal operations. Additionally, this change requires us to lock 
across *all* instances rather than just one as the current non-threadsafe 
portions do.

Are the characteristics of {{stream}} something we can determine in a static 
initializer from configs, perhaps by instantiating a dummy version?

{code}
FSDataInputStream stream = this.useHBaseChecksum ? this.streamNoFsChecksum : 
this.stream;
{code}

can useHBaseChecksum vary amongst instances in the same JVM? if it can, then we 
shouldn't be sharing cached information about the unbuffer call at all (or we 
need to have one of them per streamClass). That would solve the "assign to 
static" business by moving to per-instance caches of the reflection information.



> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v13.patch, HBASE-9393.v2.patch, HBASE-9393.v3.patch, 
> HBASE-9393.v4.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v7.patch, HBASE-9393.v8.patch, 
> HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-24 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15166880#comment-15166880
 ] 

Ashish Singhi commented on HBASE-9393:
--

Thanks for the comments.
{quote}
Several of your log messages are at ERROR but they don't give an operator any 
idea about what to do next. No info on finding a root cause, something to 
correct, or get more information. Could we add some of that kind of information 
or change them to be INFO or WARN?
{quote}
I will change the level and point to this jira in the log message.

bq. Why are we making these assignments indirectly via methods?
To handle the findbugs warnings {{ST_WRITE_TO_STATIC_FROM_INSTANCE_METHOD: 
Write to static field from instance method}}.

bq. This doesn't look like it will behave correctly in presence of concurrency. 
Can we do the reflection set up during a static initializer?
Intial plan was to do that way and do this set up only once (which we still do 
only once in the patch) but then the stream is a instance object so could not 
do that way. Regarding concurrency we have handled that, the parallel reads 
will come through HFileBlock reads and there we acquiring the stream lock and 
then call the stream unbuffer, same as we do the for the block reads.

bq. This should probably have an else clause that similarly gives the warning. 
In that case, it should probably give a pointer to this issue.
Will address it. 

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-23 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15160204#comment-15160204
 ] 

Sean Busbey commented on HBASE-9393:


Ah. next time I'll try to read more of the background. :) That part makes sense 
now.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-23 Thread stack (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15160159#comment-15160159
 ] 

stack commented on HBASE-9393:
--

[~busbey] The method rename was done at my suggestion. If you read what the 
method does, previous name made no sense.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-23 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15160137#comment-15160137
 ] 

Sean Busbey commented on HBASE-9393:


{code}
-  private static Reader pickReaderVersion(Path path, FSDataInputStreamWrapper 
fsdis,
-  long size, CacheConfig cacheConf, HFileSystem hfs, Configuration conf) 
throws IOException {
+  private static Reader openReader(Path path, FSDataInputStreamWrapper fsdis, 
long size,
+  CacheConfig cacheConf, HFileSystem hfs, Configuration conf) throws 
IOException {
{code}

Why the method rename?

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-23 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15160133#comment-15160133
 ] 

Sean Busbey commented on HBASE-9393:


Several of your log messages are at ERROR but they don't give an operator any 
idea about what to do next. No info on finding a root cause, something to 
correct, or get more information. Could we add some of that kind of information 
or change them to be INFO or WARN?

{code}
+  private static void setInstanceOfCanUnbuffer(boolean instanceOfCanUnbuffer) {
+FSDataInputStreamWrapper.instanceOfCanUnbuffer = instanceOfCanUnbuffer;
+  }
+
+  private static void setUnbufferMethod(Method unbuffer) {
+FSDataInputStreamWrapper.unbuffer = unbuffer;
+  }
{code}

Why are we making these assignments indirectly via methods?

{code}
+  if (FSDataInputStreamWrapper.instanceOfCanUnbuffer == null) {
+// To ensure we compute whether the stream is instance of CanUnbuffer 
only once.
+FSDataInputStreamWrapper.setInstanceOfCanUnbuffer(false);
+Class[] streamInterfaces = streamClass.getInterfaces();
+for (Class c : streamInterfaces) {
+  if 
(c.getCanonicalName().toString().equals("org.apache.hadoop.fs.CanUnbuffer")) {
+try {
+  
FSDataInputStreamWrapper.setUnbufferMethod(streamClass.getDeclaredMethod("unbuffer"));
+} catch (Exception e) {
+  LOG.error("Failed to find 'unbuffer' method in class " + 
streamClass, e);
+  return;
+}
+FSDataInputStreamWrapper.setInstanceOfCanUnbuffer(true);
+break;
+  }
+}
+  }
{code}

This doesn't look like it will behave correctly in presence of concurrency. Can 
we do the reflection set up during a static initializer?

{code}
+  if (FSDataInputStreamWrapper.instanceOfCanUnbuffer) {
+try {
+  FSDataInputStreamWrapper.unbuffer.invoke(wrappedStream);
+} catch (Exception e) {
+  LOG.error("Failed to unbuffer the stream so possibly there may be a 
TCP socket "
+  + "connection left open in CLOSE_WAIT state for this 
RegionServer.", e);
+}
+  }
{code}

This should probably have an else clause that similarly gives the warning. In 
that case, it should probably give a pointer to this issue.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-19 Thread Ted Yu (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15154138#comment-15154138
 ] 

Ted Yu commented on HBASE-9393:
---

+1 on v12

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v12.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch, HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-19 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15154067#comment-15154067
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 0s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 3m 
5s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 36s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 37s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
36s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
18s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 0s 
{color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 29s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 36s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
50s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 37s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 37s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 39s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 39s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
15s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
19s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
25m 24s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
14s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 29s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 37s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 112m 9s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.8.0_72. {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 110m 0s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.7.0_95. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
21s {color} | {color:green} Patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 271m 2s {color} 
| {color:black} {color} |
\\
\\
|| Reason || Tests ||
| JDK v1.8.0_72 Timed out junit tests | 
org.apache.hadoop.hbase.regionserver.TestRegionMergeTransactionOnCluster |
| JDK v1.7.0_95 Failed junit tests | hadoop.hbase.mapreduce.TestImportExport |
\\
\\
|| Subsystem || Report/Notes ||
| Docker | Client=1.9.1 Server=1.9.1 Image:yetus/hbase:date2016-02-19 |
| JIRA Patch URL | 
https://issues.apache.org/jira/secure/attachment/12788618/HBASE-9393.v12.patch |
| JIRA Issue | 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-18 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15153740#comment-15153740
 ] 

Ashish Singhi commented on HBASE-9393:
--

That I added for extra protection if its still null we can do it another time. 
Now I feel its not required. Will attach a patch in a short time.
Thanks for the review.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v2.patch, 
> HBASE-9393.v3.patch, HBASE-9393.v4.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v7.patch, 
> HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-18 Thread Ted Yu (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15153357#comment-15153357
 ] 

Ted Yu commented on HBASE-9393:
---

{code}
+  if (FSDataInputStreamWrapper.instanceOfCanUnbuffer) {
+try {
+  if (FSDataInputStreamWrapper.unbuffer == null) {
+try {
+  
FSDataInputStreamWrapper.setUnbufferMethod(streamClass.getDeclaredMethod("unbuffer"));
{code}
FSDataInputStreamWrapper.setUnbufferMethod() has been called in the for loop 
ahead of the above if block. Why do we need to call it again ?

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v10.patch, HBASE-9393.v11.patch, HBASE-9393.v2.patch, 
> HBASE-9393.v3.patch, HBASE-9393.v4.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v7.patch, 
> HBASE-9393.v8.patch, HBASE-9393.v9.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-18 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15153026#comment-15153026
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 0s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 2m 
38s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 32s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 34s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
22s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
16s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 
50s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 26s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 31s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
46s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 30s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 30s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 36s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 36s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
2s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
16s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
24m 14s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 8s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 39s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 106m 18s 
{color} | {color:red} hbase-server in the patch failed with JDK v1.8.0_72. 
{color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 99m 12s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.7.0_95. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
16s {color} | {color:green} Patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 251m 9s {color} 
| {color:black} {color} |
\\
\\
|| Reason || Tests ||
| JDK v1.8.0_72 Failed junit tests | 
hadoop.hbase.replication.TestReplicationEndpoint |
| JDK v1.8.0_72 Timed out junit tests | 
org.apache.hadoop.hbase.regionserver.TestHRegion |
| JDK v1.7.0_95 Failed junit tests | 
hadoop.hbase.coprocessor.TestRegionServerCoprocessorExceptionWithAbort |
|   | hadoop.hbase.snapshot.TestSecureExportSnapshot |
\\
\\
|| Subsystem || Report/Notes ||
| Docker | Client=1.9.1 Server=1.9.1 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-18 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15152469#comment-15152469
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 0s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 2m 
36s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 30s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 34s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
20s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 
49s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 24s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
45s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 30s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 30s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
24s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
21m 34s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:red}-1{color} | {color:red} findbugs {color} | {color:red} 2m 0s 
{color} | {color:red} hbase-server introduced 1 new FindBugs issues. {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 25s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 87m 18s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.8.0_72. {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 85m 1s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.7.0_95. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
17s {color} | {color:green} Patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 215m 7s {color} 
| {color:black} {color} |
\\
\\
|| Reason || Tests ||
| FindBugs | module:hbase-server |
|  |  Write to static field 
org.apache.hadoop.hbase.io.FSDataInputStreamWrapper.unbuffer from instance 
method org.apache.hadoop.hbase.io.FSDataInputStreamWrapper.unbuffer()  At 
FSDataInputStreamWrapper.java:from instance method 
org.apache.hadoop.hbase.io.FSDataInputStreamWrapper.unbuffer()  At 
FSDataInputStreamWrapper.java:[line 254] |
| JDK v1.8.0_72 Timed out 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-18 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15152094#comment-15152094
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 0s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 2m 
27s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 37s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 35s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 3m 
51s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 
51s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 28s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
46s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 37s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 37s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 35s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 35s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 3m 
51s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
22m 40s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:red}-1{color} | {color:red} findbugs {color} | {color:red} 2m 10s 
{color} | {color:red} hbase-server introduced 2 new FindBugs issues. {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 36s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 102m 26s 
{color} | {color:red} hbase-server in the patch failed with JDK v1.8.0_72. 
{color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 98m 33s {color} 
| {color:red} hbase-server in the patch failed with JDK v1.7.0_95. {color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
17s {color} | {color:green} Patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 244m 31s {color} 
| {color:black} {color} |
\\
\\
|| Reason || Tests ||
| FindBugs | module:hbase-server |
|  |  Write to static field 
org.apache.hadoop.hbase.io.FSDataInputStreamWrapper.instanceOfCanUnbuffer from 
instance method org.apache.hadoop.hbase.io.FSDataInputStreamWrapper.unbuffer()  
At FSDataInputStreamWrapper.java:from instance method 
org.apache.hadoop.hbase.io.FSDataInputStreamWrapper.unbuffer()  At 
FSDataInputStreamWrapper.java:[line 249] |
|  |  

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-17 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15150815#comment-15150815
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 0s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 2m 
43s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 31s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 34s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
15s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 
50s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 25s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 33s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
45s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 31s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 31s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
19s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
16s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
1s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
21m 54s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:red}-1{color} | {color:red} findbugs {color} | {color:red} 2m 2s 
{color} | {color:red} hbase-server introduced 2 new FindBugs issues. {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 24s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} unit {color} | {color:green} 78m 34s 
{color} | {color:green} hbase-server in the patch passed with JDK v1.8.0_72. 
{color} |
| {color:green}+1{color} | {color:green} unit {color} | {color:green} 80m 57s 
{color} | {color:green} hbase-server in the patch passed with JDK v1.7.0_95. 
{color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
16s {color} | {color:green} Patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 202m 44s {color} 
| {color:black} {color} |
\\
\\
|| Reason || Tests ||
| FindBugs | module:hbase-server |
|  |  Write to static field 
org.apache.hadoop.hbase.io.FSDataInputStreamWrapper.instanceOfCanUnbuffer from 
instance method org.apache.hadoop.hbase.io.FSDataInputStreamWrapper.unbuffer()  
At FSDataInputStreamWrapper.java:from instance method 
org.apache.hadoop.hbase.io.FSDataInputStreamWrapper.unbuffer()  At 
FSDataInputStreamWrapper.java:[line 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-17 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15150489#comment-15150489
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 0s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 3m 
58s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 55s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 47s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
21s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
22s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
33s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 44s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 50s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
58s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 56s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 56s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 46s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 46s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
47s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
21s {color} | {color:green} the patch passed {color} |
| {color:red}-1{color} | {color:red} whitespace {color} | {color:red} 0m 0s 
{color} | {color:red} The patch has 1 line(s) that end in whitespace. Use git 
apply --whitespace=fix. {color} |
| {color:green}+1{color} | {color:green} hadoopcheck {color} | {color:green} 
28m 57s {color} | {color:green} Patch does not cause any errors with Hadoop 
2.4.0 2.4.1 2.5.0 2.5.1 2.5.2 2.6.1 2.6.2 2.6.3 2.7.1. {color} |
| {color:red}-1{color} | {color:red} findbugs {color} | {color:red} 2m 41s 
{color} | {color:red} hbase-server introduced 4 new FindBugs issues. {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 45s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 46s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:red}-1{color} | {color:red} unit {color} | {color:red} 148m 11s 
{color} | {color:red} hbase-server in the patch failed with JDK v1.8.0_72. 
{color} |
| {color:green}+1{color} | {color:green} unit {color} | {color:green} 133m 2s 
{color} | {color:green} hbase-server in the patch passed with JDK v1.7.0_95. 
{color} |
| {color:green}+1{color} | {color:green} asflicense {color} | {color:green} 0m 
27s {color} | {color:green} Patch does not generate ASF License warnings. 
{color} |
| {color:black}{color} | {color:black} {color} | {color:black} 354m 32s {color} 
| {color:black} {color} |
\\
\\
|| Reason || Tests ||
| FindBugs | module:hbase-server |
|  |  Incorrect lazy initialization of static field 
org.apache.hadoop.hbase.io.FSDataInputStreamWrapper.instanceOfCanUnbuffer in 
org.apache.hadoop.hbase.io.FSDataInputStreamWrapper.unbuffer()  At 
FSDataInputStreamWrapper.java:field 
org.apache.hadoop.hbase.io.FSDataInputStreamWrapper.instanceOfCanUnbuffer in 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-16 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15148887#comment-15148887
 ] 

Ashish Singhi commented on HBASE-9393:
--

Thanks Stack.
{noformat}
[ERROR] 
/home/root1/Code/H-Master/hbase-server/src/main/java/org/apache/hadoop/hbase/io/FSDataInputStreamWrapper.java:[253,17]
 cannot find symbol
[ERROR] symbol:   method unbuffer()
{noformat}
I will handle this in my next version of the patch along with the checkstyle 
warning.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-16 Thread stack (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15148859#comment-15148859
 ] 

stack commented on HBASE-9393:
--

If you try


mvn clean install -DskipTests -DHBasePatchProcess -Dhadoop-two.version=2.4.0 > 
/testptch/patchprocess/patch-javac-2.4.0.txt


locallly, what is the complaint? Are you making use of an API that is not in 
earlier hadoops? (I don't see it looking at patch...)

And the warnings about whitespace, etc., seem easy enough to clean up.  Thanks 
[~ashish singhi]



> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch, 
> HBASE-9393.v7.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-16 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15148837#comment-15148837
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 0s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 2m 
25s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 36s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 34s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 3m 
58s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
16s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 
52s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 30s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 31s 
{color} | {color:green} master passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
44s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 36s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 36s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 35s 
{color} | {color:green} the patch passed with JDK v1.7.0_95 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 35s 
{color} | {color:green} the patch passed {color} |
| {color:red}-1{color} | {color:red} checkstyle {color} | {color:red} 3m 52s 
{color} | {color:red} Patch generated 1 new checkstyle issues in hbase-server 
(total was 160, now 161). {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
16s {color} | {color:green} the patch passed {color} |
| {color:red}-1{color} | {color:red} whitespace {color} | {color:red} 0m 0s 
{color} | {color:red} The patch has 1 line(s) that end in whitespace. Use git 
apply --whitespace=fix. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 0m 51s 
{color} | {color:red} Patch causes 16 errors with Hadoop v2.4.0. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 1m 41s 
{color} | {color:red} Patch causes 16 errors with Hadoop v2.4.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 2m 31s 
{color} | {color:red} Patch causes 16 errors with Hadoop v2.5.0. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 3m 23s 
{color} | {color:red} Patch causes 16 errors with Hadoop v2.5.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 4m 13s 
{color} | {color:red} Patch causes 16 errors with Hadoop v2.5.2. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 5m 4s 
{color} | {color:red} Patch causes 16 errors with Hadoop v2.6.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 5m 54s 
{color} | {color:red} Patch causes 16 errors with Hadoop v2.6.2. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 6m 45s 
{color} | {color:red} Patch causes 16 errors with Hadoop v2.6.3. {color} |
| {color:red}-1{color} | {color:red} findbugs {color} | {color:red} 2m 3s 
{color} | {color:red} hbase-server introduced 2 new FindBugs issues. {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 29s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-15 Thread stack (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15147647#comment-15147647
 ] 

stack commented on HBASE-9393:
--

Thanks for the revert [~busbey] Makes sense. Sorry for making work for others.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-14 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15146977#comment-15146977
 ] 

Ashish Singhi commented on HBASE-9393:
--

bq. First of all, please make sure discussions get reflected in a public place 
(like this jira or dev@). Not just the decision, but the reasoning is important 
so that others can chime in.

All the discussions, reviews and comments are put up in the jira. The offline 
discussion was only about handling these in HBase versions which by default 
have Hadoop jars prior to 2.7.1 version and this point was also noted down in 
the jira.

The patch was implemented based on one of the Colin suggestion(#2) and we have 
commented the reason also for not going with other suggestion.

bq. Please don't catch and then discard Throwable
I agree and can handle this once we have a conclusion on this jira.

Pardon me for my oversight on CanBuffer interface compatibility check.
And I saw that Ted has already raised HADOOP-12805 to handle the interface 
compatibility.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-13 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15146069#comment-15146069
 ] 

Sean Busbey commented on HBASE-9393:


essentially, is there a compelling reason not to put this behind our normal 
hadoop-compatibility-mess-mitigation so that it can be more widely applicable?

Additionally, the CanUnbuffer interface is labeled IA.Private, so I am -1 on 
having a hard dependency on it in our code base. We should petition Hadoop to 
make it LimitedPrivate(HBASE) or better yet Public.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-13 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15146070#comment-15146070
 ] 

Sean Busbey commented on HBASE-9393:


Sorry for not waiting on more discussion, but reverted from master so that 
[~yuzhih...@gmail.com] has an easier time getting precommit verification of 
HBASE-15219

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-13 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15146076#comment-15146076
 ] 

Sean Busbey commented on HBASE-9393:


Also, we expressly do not support Hadoop 2.7.0, so please phrase any reference 
to the Hadoop 2.7 line as "Hadoop 2.7.1+"

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-13 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15146079#comment-15146079
 ] 

Sean Busbey commented on HBASE-9393:


Anoop:
{quote}
We will get this fix in for 2.0 only. (As there we have hadoop 2.7.0+ version 
by default).
Users on older version seeing this issue can get it fixed by upping their 
hadoop version in client side to 2.7.0 at least and apply this patch. 
Branch-1 is on hadoop 2.5.x only by default. So unless our default version is 
not upped there, there is no point in adding the fix there. 
Can open a backport jira when applicable.
{quote}

Ashish:
{quote}
Attached patch addressing review comment.
Thanks for all the offline discussion on this, Anoop & Ram.
For now this issue will be fixed only for 2.0.0. Once we plan to up our hadoop 
version to 2.7.x+ in any our branch code we can fix the issue there also as 
part of a back port jira.
{quote}

Okay, now I am even more -1 on this patch.

First of all, please make sure discussions get reflected in a public place 
(like this jira or dev@). Not just the decision, but the reasoning is important 
so that others can chime in.

Requiring our users to have the Hadoop 2.7.1 client libraries in their 
deployment is a terrible user experience and idea. 1) AFAICT we have not had 
any discussion nor decision to change our "supported Hadoop versions" in HBase 
2.0 to only be Hadoop 2.7.1+. 2) I do not trust Hadoop to have the 2.7.1 
clients work reliably across the HDFS server versions we support now and in the 
future. 3) we expressly tell folks in our operational guides that they should 
replace the hadoop jars we ship with those for their actual Hadoop 
distribution. This patch goes directly counter to that advice and does not 
change it (nor should it change, see #1 and #2).

The fact that Unbuffer is Private / Evolving in the Hadoop code base just makes 
the above more severe. We risk ending up beached on a very tight range of 
possible Hadoop client library versions.



> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-13 Thread Sean Busbey (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15146088#comment-15146088
 ] 

Sean Busbey commented on HBASE-9393:


and in general review feedback:

{code}
+  } catch (Throwable e) {
+LOG.error("Failed to unbuffer the stream so possibly there may be a 
TCP socket connection "
++ "left open in CLOSE_WAIT state.", e);
+  }
{code}

Please don't catch and then discard Throwable. It's overly broad and includes 
e.g. all the Error cases like ThreadDeath and OutOfMemoryError. Given the 
signature of {{unbuffer}} why is this not simply catching RuntimeException?

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-13 Thread Andrew Purtell (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15146120#comment-15146120
 ] 

Andrew Purtell commented on HBASE-9393:
---

FWIW I agree with Sean about changes that would tie us to specific Hadoop 
versions. Not only should discussion to that effect go on the issue (with at 
mentions to publicize it) but also please email dev@ to start a discussion. It 
is a really, really serious change to contemplate. We need to have the opposite 
of the casual way in this issue that question was approached. 

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-13 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15146145#comment-15146145
 ] 

Hudson commented on HBASE-9393:
---

FAILURE: Integrated in HBase-Trunk_matrix #707 (See 
[https://builds.apache.org/job/HBase-Trunk_matrix/707/])
Revert "HBASE-9393 Hbase does not closing a closed socket resulting in (busbey: 
rev 3897c4e102b223847e1ceedf363df59fe24eb294)
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderImpl.java
* hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
* hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java


> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-12 Thread Hudson (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15145809#comment-15145809
 ] 

Hudson commented on HBASE-9393:
---

FAILURE: Integrated in HBase-Trunk_matrix #706 (See 
[https://builds.apache.org/job/HBase-Trunk_matrix/706/])
HBASE-9393 Hbase does not closing a closed socket resulting in many (stack: rev 
c8d133186b85a4e7298bab3376ad96899860b1c7)
* hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileBlock.java
* 
hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFileReaderImpl.java
* hbase-server/src/main/java/org/apache/hadoop/hbase/io/hfile/HFile.java


> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-12 Thread stack (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15145361#comment-15145361
 ] 

stack commented on HBASE-9393:
--

I tried to backport to branch-1 but doesn't apply cleanly.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-12 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15145636#comment-15145636
 ] 

Ashish Singhi commented on HBASE-9393:
--

As [~anoop.hbase] quoted above,
{quote}
After some discussion this is what we think
We will get this fix in for 2.0 only. (As there we have hadoop 2.7.0+ version 
by default).
Users on older version seeing this issue can get it fixed by upping their 
hadoop version in client side to 2.7.0 at least and apply this patch. 
Branch-1 is on hadoop 2.5.x only by default. So unless our default version is 
not upped there, there is no point in adding the fix there. 
Can open a backport jira when applicable.
{quote}
So only I did not provide the patch for branch-1 earlier. Let me add the same 
in the release note.

Thanks [~cmccabe] for the inputs.
Thanks [~tedyu], [~anoop.hbase], [~ramkrishna.s.vasude...@gmail.com] and 
[~stack] for the reviews and discussions.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-12 Thread stack (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15145657#comment-15145657
 ] 

stack commented on HBASE-9393:
--

Thanks for clarification [~ashish singhi] I see you have it already covered in 
the release note.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-02-04 Thread ramkrishna.s.vasudevan (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15133691#comment-15133691
 ] 

ramkrishna.s.vasudevan commented on HBASE-9393:
---

[~saint@gmail.com] - Do you have any feedback?  We think it is good to go 
in 2.0 atleast. 

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-01-31 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15125400#comment-15125400
 ] 

Ashish Singhi commented on HBASE-9393:
--

[~stack] any feedback? Thanks.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-01-29 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15123199#comment-15123199
 ] 

Ashish Singhi commented on HBASE-9393:
--

{{TestFlushSnapshotFromClient}} failure is not related to patch. I have 
manually ran 3 times locally and not able to reproduce it.
{noformat}
---
 T E S T S
---
Running org.apache.hadoop.hbase.snapshot.TestFlushSnapshotFromClient
Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 95.841 sec - in 
org.apache.hadoop.hbase.snapshot.TestFlushSnapshot
FromClient

Results :

Tests run: 9, Failures: 0, Errors: 0, Skipped: 0

[INFO]
[INFO] --- maven-surefire-plugin:2.18.1:test (secondPartTestsExecution) @ 
hbase-server ---
[INFO] Tests are skipped.
[INFO] 
[INFO] BUILD SUCCESS
[INFO] 
[INFO] Total time: 1:50.899s
[INFO] Finished at: Fri Jan 29 14:07:38 GMT+05:30 2016
[INFO] Final Memory: 36M/96M
[INFO] 


---
 T E S T S
---
Running org.apache.hadoop.hbase.snapshot.TestFlushSnapshotFromClient
Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 93.399 sec - in 
org.apache.hadoop.hbase.snapshot.TestFlushSnapshot
FromClient

Results :

Tests run: 9, Failures: 0, Errors: 0, Skipped: 0

[INFO]
[INFO] --- maven-surefire-plugin:2.18.1:test (secondPartTestsExecution) @ 
hbase-server ---
[INFO] Tests are skipped.
[INFO] 
[INFO] BUILD SUCCESS
[INFO] 
[INFO] Total time: 1:48.177s
[INFO] Finished at: Fri Jan 29 14:13:52 GMT+05:30 2016
[INFO] Final Memory: 35M/89M
[INFO] 


---
 T E S T S
---
Running org.apache.hadoop.hbase.snapshot.TestFlushSnapshotFromClient
Tests run: 9, Failures: 0, Errors: 0, Skipped: 0, Time elapsed: 94.072 sec - in 
org.apache.hadoop.hbase.snapshot.TestFlushSnapshot
FromClient

Results :

Tests run: 9, Failures: 0, Errors: 0, Skipped: 0

[INFO]
[INFO] --- maven-surefire-plugin:2.18.1:test (secondPartTestsExecution) @ 
hbase-server ---
[INFO] Tests are skipped.
[INFO] 
[INFO] BUILD SUCCESS
[INFO] 
[INFO] Total time: 1:48.012s
[INFO] Finished at: Fri Jan 29 14:16:28 GMT+05:30 2016
[INFO] Final Memory: 36M/100M
[INFO] 
{noformat}

[~saint@gmail.com], is v6 patch ok to commit ?
Thanks.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-01-28 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15123028#comment-15123028
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 0s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
1s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 2m 
42s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 32s 
{color} | {color:green} master passed with JDK v1.8.0_66 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 34s 
{color} | {color:green} master passed with JDK v1.7.0_91 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
19s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
16s {color} | {color:green} master passed {color} |
| {color:red}-1{color} | {color:red} findbugs {color} | {color:red} 1m 51s 
{color} | {color:red} hbase-server in master has 1 extant Findbugs warnings. 
{color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 24s 
{color} | {color:green} master passed with JDK v1.8.0_66 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s 
{color} | {color:green} master passed with JDK v1.7.0_91 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
45s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 31s 
{color} | {color:green} the patch passed with JDK v1.8.0_66 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 31s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed with JDK v1.7.0_91 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 3m 
55s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
16s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
1s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 0m 51s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.4.0. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 1m 42s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.4.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 2m 33s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.5.0. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 3m 23s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.5.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 4m 13s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.5.2. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 5m 4s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.6.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 5m 57s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.6.2. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 6m 48s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.6.3. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 7s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 32s 
{color} | {color:green} the patch passed with JDK v1.8.0_66 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed with JDK v1.7.0_91 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-01-28 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15121069#comment-15121069
 ] 

Ashish Singhi commented on HBASE-9393:
--

Thanks for the comments.
Sorry for delay in repsonse, I was on holidays.
bq. Adding the below as finally in a method named pickReaderVersion seems a bit 
odd... is pickReaderVersion only place we read in the file trailer? That seems 
odd (not your issue Ashish Singhi). You'd think we'd want to keep the trailer 
around in the reader.
[~anoop.hbase] has already replied for this. Thanks.

bq. Bq. Is it odd adding this unbufferStream to hbase types when there is the 
Interface CanUnbuffer up in hdfs? Should we have a local hbase equivalent... 
and put it on HFileBlock, HFileReader... Then the relation is more clear? 
Perhaps overkill?
>From HBase side we do not have any control over the socket, so I don’t think 
>we can do anything here apart from calling the unbuffer api for the stream 
>which implements CanBuffer class. I also think this is not needed.

bq. May be we should at least rename this method pickReaderVersion ?
Changed it to openReader as per the suggestion.

Last QA run for v5 was clean. Updated patch addressing method rename comment.
Thanks all again.

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-01-28 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15121383#comment-15121383
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 0s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 2m 
44s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 31s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 35s 
{color} | {color:green} master passed with JDK v1.7.0_91 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
1s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} master passed {color} |
| {color:red}-1{color} | {color:red} findbugs {color} | {color:red} 1m 50s 
{color} | {color:red} hbase-server in master has 1 extant Findbugs warnings. 
{color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 25s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 33s 
{color} | {color:green} master passed with JDK v1.7.0_91 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 0m 
45s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 30s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 30s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed with JDK v1.7.0_91 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 34s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 4m 
15s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
17s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 0m 50s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.4.0. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 1m 41s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.4.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 2m 32s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.5.0. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 3m 23s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.5.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 4m 16s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.5.2. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 5m 11s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.6.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 6m 5s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.6.2. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 6m 59s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.6.3. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 1m 
57s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 25s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 31s 
{color} | {color:green} the patch passed with JDK v1.7.0_91 

[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-01-28 Thread Ashish Singhi (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15121391#comment-15121391
 ] 

Ashish Singhi commented on HBASE-9393:
--

TestReplicationSmallTests failed due to some XML issue.
{noformat}
Caused by: org.xml.sax.SAXParseException; systemId: 
file:///home/jenkins/jenkins-slave/workspace/PreCommit-HBASE-Build/component/hbase-server/target/surefire-reports/TEST-org.apache.hadoop.hbase.replication.TestReplicationSmallTests.xml;
 lineNumber: 424; columnNumber: 28; XML document structures must start and end 
within the same entity.
{noformat}

> Hbase does not closing a closed socket resulting in many CLOSE_WAIT 
> 
>
> Key: HBASE-9393
> URL: https://issues.apache.org/jira/browse/HBASE-9393
> Project: HBase
>  Issue Type: Bug
>Affects Versions: 0.94.2, 0.98.0
> Environment: Centos 6.4 - 7 regionservers/datanodes, 8 TB per node, 
> 7279 regions
>Reporter: Avi Zrachya
>Assignee: Ashish Singhi
>Priority: Critical
> Fix For: 2.0.0
>
> Attachments: HBASE-9393.patch, HBASE-9393.v1.patch, 
> HBASE-9393.v2.patch, HBASE-9393.v3.patch, HBASE-9393.v4.patch, 
> HBASE-9393.v5.patch, HBASE-9393.v5.patch, HBASE-9393.v5.patch, 
> HBASE-9393.v6.patch, HBASE-9393.v6.patch
>
>
> HBase dose not close a dead connection with the datanode.
> This resulting in over 60K CLOSE_WAIT and at some point HBase can not connect 
> to the datanode because too many mapped sockets from one host to another on 
> the same port.
> The example below is with low CLOSE_WAIT count because we had to restart 
> hbase to solve the porblem, later in time it will incease to 60-100K sockets 
> on CLOSE_WAIT
> [root@hd2-region3 ~]# netstat -nap |grep CLOSE_WAIT |grep 21592 |wc -l
> 13156
> [root@hd2-region3 ~]# ps -ef |grep 21592
> root 17255 17219  0 12:26 pts/000:00:00 grep 21592
> hbase21592 1 17 Aug29 ?03:29:06 
> /usr/java/jdk1.6.0_26/bin/java -XX:OnOutOfMemoryError=kill -9 %p -Xmx8000m 
> -ea -XX:+UseConcMarkSweepGC -XX:+CMSIncrementalMode 
> -Dhbase.log.dir=/var/log/hbase 
> -Dhbase.log.file=hbase-hbase-regionserver-hd2-region3.swnet.corp.log ...



--
This message was sent by Atlassian JIRA
(v6.3.4#6332)


[jira] [Commented] (HBASE-9393) Hbase does not closing a closed socket resulting in many CLOSE_WAIT

2016-01-28 Thread Hadoop QA (JIRA)

[ 
https://issues.apache.org/jira/browse/HBASE-9393?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel=15122068#comment-15122068
 ] 

Hadoop QA commented on HBASE-9393:
--

| (x) *{color:red}-1 overall{color}* |
\\
\\
|| Vote || Subsystem || Runtime || Comment ||
| {color:blue}0{color} | {color:blue} reexec {color} | {color:blue} 0m 0s 
{color} | {color:blue} Docker mode activated. {color} |
| {color:green}+1{color} | {color:green} hbaseanti {color} | {color:green} 0m 
0s {color} | {color:green} Patch does not have any anti-patterns. {color} |
| {color:green}+1{color} | {color:green} @author {color} | {color:green} 0m 0s 
{color} | {color:green} The patch does not contain any @author tags. {color} |
| {color:red}-1{color} | {color:red} test4tests {color} | {color:red} 0m 0s 
{color} | {color:red} The patch doesn't appear to include any new or modified 
tests. Please justify why no new tests are needed for this patch. Also please 
list what manual steps were performed to verify this patch. {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 3m 
48s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 1m 7s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 52s 
{color} | {color:green} master passed with JDK v1.7.0_91 {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 5m 
15s {color} | {color:green} master passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
23s {color} | {color:green} master passed {color} |
| {color:red}-1{color} | {color:red} findbugs {color} | {color:red} 2m 51s 
{color} | {color:red} hbase-server in master has 1 extant Findbugs warnings. 
{color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 58s 
{color} | {color:green} master passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 50s 
{color} | {color:green} master passed with JDK v1.7.0_91 {color} |
| {color:green}+1{color} | {color:green} mvninstall {color} | {color:green} 1m 
7s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 1m 10s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 1m 10s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} compile {color} | {color:green} 0m 50s 
{color} | {color:green} the patch passed with JDK v1.7.0_91 {color} |
| {color:green}+1{color} | {color:green} javac {color} | {color:green} 0m 50s 
{color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} checkstyle {color} | {color:green} 5m 
26s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} mvneclipse {color} | {color:green} 0m 
23s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} whitespace {color} | {color:green} 0m 
0s {color} | {color:green} Patch has no whitespace issues. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 1m 14s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.4.0. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 2m 26s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.4.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 3m 47s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.5.0. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 5m 4s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.5.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 6m 22s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.5.2. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 7m 40s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.6.1. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 9m 4s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.6.2. {color} |
| {color:red}-1{color} | {color:red} hadoopcheck {color} | {color:red} 10m 21s 
{color} | {color:red} Patch causes 24 errors with Hadoop v2.6.3. {color} |
| {color:green}+1{color} | {color:green} findbugs {color} | {color:green} 2m 
52s {color} | {color:green} the patch passed {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 54s 
{color} | {color:green} the patch passed with JDK v1.8.0_72 {color} |
| {color:green}+1{color} | {color:green} javadoc {color} | {color:green} 0m 53s 
{color} | {color:green} the patch passed with JDK v1.7.0_91 

  1   2   >