[Jmol-users] Animations from FirstGlance in Jmol

2016-05-31 Thread Eric Martz
I have just released a new version of FirstGlance in Jmol 
 with the ability to save static images or 
presentation-ready multi-GIF animations. I have tried to make a 
user-friendly interface that can save these in just a few clicks, with 
optimal defaults. I welcome feedback from anyone who tries it out.


You can see some example animations in

 * Google Slides
   

   or
 * Downloadable Powerpoint
   

   (both sets of slides have the same content)

In order to simplify things, FirstGlance uses 'canned' rendering and 
color schemes. It does not have tools for customizing the rendering and 
colors. Customization in JSmol can be done most easily with the /Scene 
Authoring Tools /built into Proteopedia.Org (see its Video Guide 
). Once 
you customize a molecular scene in Proteopedia, it is immediately 
available to share with anyone anywhere.


Any scene in Proteopedia (or on any Jmol web page) can be saved as a 
presentation animation. You just open the Jmol Console, write a PNGJ 
file, drop that into FirstGlance, and proceed to use the Save Animation 
tool in FirstGlance. (If you know how to use the 'capture' command in 
Jmol, you don't need to use FirstGlance, of course.) See Instructions 
.


Thanks to Bob Hanson for the amazing 'capture' command, which even more 
amazingly saves files to your local disk from JSmol or Jmol_S in a web 
browser. Thanks to Angel Herraez for help along the way, and to everyone 
in the Jmol team!


-Eric

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Re: [Jmol-users] how to interact with Jmol viewer using Integration.java

2016-05-31 Thread Bob
Answered on developer list

Robert M. Hanson
St. Olaf College Chamistry
from my Windows phone 

-Original Message-
From: "Sam Paul D." 
Sent: ‎5/‎28/‎2016 8:17 AM
To: "jmol-users" 
Subject: [Jmol-users] how to interact with Jmol viewer using Integration.java

Using integration.java I have put Jmol Viewer to a new frame. 
How to interact with that Jmol Viewer? that is I would like to add a new panel 
to the frame and would like to view different molecules in that Jmol Viewer. 
Please suggest.


regards,
Sam Paul D.--
What NetFlow Analyzer can do for you? Monitors network bandwidth and traffic
patterns at an interface-level. Reveals which users, apps, and protocols are 
consuming the most bandwidth. Provides multi-vendor support for NetFlow, 
J-Flow, sFlow and other flows. Make informed decisions using capacity 
planning reports. https://ad.doubleclick.net/ddm/clk/305295220;132659582;e___
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