Re: [Marxism-Thaxis] Re-evaluating Lysenko

2010-03-27 Thread CeJ
JF:The problem was that Lysenko with
the baking of the Soviet regime
continued to hang on to neo-Lamarckiansm,
and more importantly was able to
coerce other Soviet scientists into
hanging on to it, long after it
had been discredited in the West.
That caused immeasurable harm
to Soviet biology, especially
when that led to scientists like
Vavilov being imprisoned for
being Mendelians.

That is an assertion of all the harm done, but no actual support, even
in reasoning, is offered here. It could be the reaction--the
backlash-- was as much an issue in holding back science as anything
Lysenko said or did. The Mendelians didn't really pioneer the 'green
revolution'--the techniques turned on horticultural techniques of
crossing strains based on their adaptation to certain environments,
looking for hybrids that expressed the desired traits and passed them
on. Much of what held back the Mendelians turned on a simplistic idea
of the relationship between chromosomes and other units of genetic
inheritance and expressed traits. That was Lysenko's points about
statistics--the patterns were there, but they weren't yielding the
information required to come up with new strains required to improve
agriculture.

CJ

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Re: [Marxism-Thaxis] Re-evaluating Lysenko

2010-03-27 Thread CeJ
Borlaug is often called the 'father of the green revolution' and in
later life came to be identified with Mendelian genetics and even for
his advocacy of GM crops. HOWEVER, the accomplishment that started the
'revolution' was him doing the SAME sort of inter-species hybridizing
as Burbank, Michurin and Lysenko (when he was an active
horitculturalist).
Basically, he crossed Mexican wheat with E. Asian wheat to get a
hybrid that had short straw so the crop could take heavy doses of
fertilizer. He then crossed that with E. African to get a more drought
resistant variety. The Mendelian aspects of this were worked out
AFTERWARD. The techniques didn't require Mendelian genetics (which at
the time concentrated on research of INTRA-SPECIE breeding).

http://www.idrc.ca/evaluation/ev-115017-201-1-DO_TOPIC.html

Now that horses have been replaced with machines, the need for long
straw has largely disappeared, and the dangers of lodging have also
disappeared. This is because the modern trend has been towards the
exact opposite of long straw. The so-called dwarf and semi-dwarf
wheats have very short straw, measuring as little as two feet in
length. These dwarf wheats have the advantage that they can be given
heavy doses of fertilizer without danger of lodging. As a result,
their yields can be increased considerably.

This was the basis of the Green Revolution. In the 1940s, the
Rockefeller Foundation decided to undertake agricultural research in
non-industrial countries and, with the cooperation of the Mexican
Government, they started in Mexico. One of their scientists was Norman
Borlaug who was breeding improved varieties of wheat. He became aware
of the falling prices of fertiliser, of the yield increases that could
be obtained from this fertiliser, if there were no lodging, and of the
possibility of developing dwarf wheats that were resistant to lodging.
This became the basis of his research.

The dwarf character in wheat originated in Japan, and it was
incorporated into American wheats by O. A. Vogel. Borlaug took Vogel's
dwarf wheats to Mexico in 1954. He bred new dwarf wheat varieties from
them, and they yielded so well that it was economic to grow them with
artificial fertilisers, on irrigated land, in northwest Mexico. The
increase in wheat production was dramatic. Within a few years, Mexico
became self-supporting in wheat. The next development was that
scientists in India heard about these new varieties and, after a few
experiments, they imported bulk quantities of seed from Mexico. Very
soon, India changed from being a wheat importing nation to being a
wheat exporting nation. Similar increases in production occurred in
Pakistan, China, and various countries of the Middle East and North
Africa.

In the meanwhile, other scientists of the Rockefeller and Ford
Foundations were copying Borlaug's work in the Philippines, except
that they were working with rice. They too produced new dwarf
varieties that could be grown with cheap fertiliser, and which then
had greatly increased yields. Quite quickly, countries such as the
Philippines, India, Indonesia, and Thailand, increased their rice
yields as much as the wheat growers had increased their wheat
production.

The public relations people of these two Foundations coined the terms
miracle wheat, miracle rice, and green revolution. We can
forgive them for their euphoria, and their Madison Avenue terminology.
The effects of the green revolution really were stunning. Here, at
last, was technical aid, from the Industrial World to the
Non-Industrial, that really meant something. Millions of people were
saved from starvation, and at least one billion people were saved from
serious malnutrition. And, as we saw in the last chapter, Norman
Borlaug was given the Nobel Peace Prize. It was possibly the most
richly deserved Peace Prize ever awarded.

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[Marxism-Thaxis] Descartes Marxism: Selected Bibliography

2010-03-27 Thread Ralph Dumain
OK, here's my work in progress:

Descartes  Marxism: Selected Bibliography
http://www.autodidactproject.org/bib/descartes-marx.html

Passing references to Descartes are legion, but substantive additions 
are needed and welcome.
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Re: [Marxism-Thaxis] Re-evaluating Lysenko

2010-03-27 Thread CeJ
The Soviet Union was obsessed with one grain in particular: wheat. And
on quite a number of occasions Lysenko and his researchers were
criticized for not producing a variety that could grow well in the
short growing season. And then there was the controversy over winter
vs. spring wheat (with the wrong approach apparently originating from
the US actually). At any rate, eventually the Soviet Union
over-planted and over-extended the range of winter wheat for the
climates, and after a series of harsh winters, experienced disastrous
crop failures requiring them to import huge amounts of wheat.

But wheat is a complex plant that doesn't yield easily to Mendelian
genetics. It's a haploid hybrid of three diploid grasses. In the terms
of the more advanced genetics, it is genomically unstable. Mendelians
mocked Lysenko when he reported grains of rye appearing in ears of
wheat grain. But Lysenko was right about this; it's quite possible for
wheat to introgress with diploids like rye as well as tetraploid
species.

There is even a hybrid of wheat and rye now produced commercially
(this was done without advanced GM techniques). The Soviet Union had
long been interested in this, but as Lysenko himself reported, the
results they got were sterile. They also tried crossing wheat with
other native grasses to make it more hardy and productive in the
harsher climates of the Soviet Union.

 Success at getting a wheat-rye cross that could reproduce came much later.

The major advances in improving wheat production came in the 19th
century more or less indifferent to Mendelian genetics. Mendelian
genetics and inbreeding techniques in the first half of the 20th
century did yield some gains into disease resistance. This was
combined with the traditional plant breeding methods (of which
Michurin and Lysenko approved) in Mexico to yield the so-called Green
Revolution's hybrids (the key was old-fashioned cross-breeding with E.
Asian dwarf wheat). One irony would be that such a big step forward
was based on such an old technique. The other irony might be that it
couldn't be done today because some company or government might have a
patent on the Japanese wheat's genes!

http://mbe.oxfordjournals.org/cgi/content/abstract/msi196v1

Introgressive hybridization has played a crucial role in the evolution
of many plant species, especially polyploids. The duplicated genetic
material and wide geographical distribution facilitates hybridization
and introgression among polyploid species having either homologous or
homoeologous genomes. Such introgression may lead to the production of
recombinant genomes that are more difficult to form at the diploid
level. Crop genes that have introgressed into wild relatives can
increase the capability of the wild relatives to adapt to agricultural
environments and compete with crops, or to compete with other wild
species. Although the transfer of genes from crops into their
con-specific immediate wild progenitors has been reported, little is
known about spontaneous gene movement from crops to more distantly
related species. We describe recent spontaneous DNA introgression from
domesticated polyploid wheat into distantly related, wild tetraploid
Aegilops peregrina (syn. Ae. variabilis), and the stabilization of
this sequence in wild populations despite not having homologous
chromosomes. Our results show that DNA can spontaneously introgress
between homoeologous genomes of species of the tribe Triticeae and, in
the case of crop-wild relatives, possibly enrich the wild population.
These results also emphasize the need for fail-safe mechanisms in
transgenic crops to prevent gene flow where there may be ecological
risks.
Keywords: Introgression; Wheat; Triticum aestivum; Aegilops peregrina;
Polyploidy; Transgenic crops.

http://www.desicca.de/plant_breeding/Rye_introgression/body_rye_introgression.html

Current  list of wheats with rye introgression

of  homoeologous groups 1, 4 and 5

After  the  first  reports on  spontaneous  wheat-rye  chromosome
substitutions 5R(5A) by Katterman (1937), O'Mara (1946) and Riley and
Chapman (1958), during the past three decades  particularly, 1R(1B)
substitutions and 1RS.1BL translocations were described in more  than
200  cultivars  of wheat  from  all over  the  world (Blüthner  and
Mettin 1973; Mettin et al.  1973;  Zeller  1972; Zeller  1973;  Zeller
and Fischbeck 1971). Their  most  important phenotypic deviation from
common wheat cultivars is the so-called wheat-rye resistance, i. e.
the presence of wide-range resistance to  races  of powdery mildew and
rusts (Bartos  and  Bares  1971; Zeller 1973), which is linked with
decreased breadmaking  quality (Zeller  et  al. 1982), good ecological
adaptability  and yield performance (Rajaram et al. 1983; Schlegel and
Meinel 1994). The origin of the alien chromosome was intensively
discussed  by genetic  and  historical reasons. It turned out  that
basically four sources   exist - two in Germany (it might be one
source, see 

[Marxism-Thaxis] Prion theory is not little wrinkle either

2010-03-27 Thread CeJ
The dogma of the Mendelians was in thinking of genetic coding as
something exclusive that somehow transcended the physical world and
interactions and processes in it.

http://www.newscientist.com/article/mg18324611.400

 Lamarckism finds new lease of life in a prion

* 21 August 2004 by Philip Cohen
* Magazine issue 2461

EVOLUTION can occur in a way never previously shown. Geneticists have
discovered that the strange proteins called prions can temporarily
give yeast cells new powers which can then be quickly, and
permanently, assimilated into their chromosomes.

This provides a novel way for organisms to try out different traits,
survive and adapt to fluctuating environments, says Susan Lindquist
who led the work at the Whitehead Institute for Biomedical Research in
Cambridge, Massachusetts. The finding unexpectedly brings together the
theories that Charles Darwin and his chief rival Jean-Baptiste Lamarck
developed to explain evolution.

http://cat.inist.fr/?aModele=afficheNcpsidt=956708

Résumé / Abstract
The experimental evidence accumulated for the last half of the century
clearly suggests that inherited variation is not restricted to the
changes in genomic sequences. The prion model, originally based on
unusual transmission of certain neurodegenerative diseases in mammals,
provides a molecular mechanism for the template-like reproduction of
alternative protein conformations. Recent data extend this model to
protein-based genetic elements in yeast and other fungi. Reproduction
and transmission of yeast protein-based genetic elements is controlled
by the prion replication machinery of the cell, composed of the
protein helpers responsible for the processes of assembly and
disassembly of protein structures and multiprotein complexes. Among
these, the stress-related chaperones of Hsp100 and Hsp70 groups play
an important role. Alterations of levels or activity of these proteins
result in mutator or antimutator affects in regard to protein-based
genetic elements. Protein mutagens have also been identified that
affect formation and/or propagation of the alternative protein
conformations. Prion-forming abilities appear to be conserved in
evolution, despite the divergence of the corresponding amino acid
sequences. Moreover, a wide variety of proteins of different origins
appear to possess the ability to form amyloid-like aggregates, that in
certain conditions might potentially result in prion-like switches.
This suggests a possible mechanism for the inheritance of acquired
traits, postulated in the Lamarckian theory of evolution. The prion
model also puts in doubt the notion that cloned animals are
genetically identical to their genome donors, and suggests that genome
sequence would not provide a complete information about the genetic
makeup of an organism.

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