Re: [matplotlib-devel] OpenGL backend with Galry

2012-11-17 Thread Cyrille Rossant
>
> Yup, it's a bit of a hack right now b/c you need to merge several
> branches and tools that are still in review, but it's not too bad.
>
> You need to start from this branch:
>
> https://github.com/ellisonbg/ipython/tree/jsonhandlers
>
> and then grab this repo:
>
> https://github.com/ipython/jsplugins
>
> I would start by testing the d3graph plugin and verify that you can do
> what I show here (watch ~ 40 seconds):
>
> http://www.youtube.com/watch?v=F4rFuIb1Ie4&t=40m0s
>
> That should give you the basics.  Then the webgl visualizer example is
> here:
>
> https://github.com/RishiRamraj/seepymol
>
> Cheers,
>
> f
>

Great, thanks! I'll take a look to that and get back to you when I have
something.

Cheers,
Cyrille
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Re: [matplotlib-devel] OpenGL backend with Galry

2012-11-17 Thread Cyrille Rossant
>
> Yup, it's a bit of a hack right now b/c you need to merge several
>> branches and tools that are still in review, but it's not too bad.
>>
>> You need to start from this branch:
>>
>> https://github.com/ellisonbg/ipython/tree/jsonhandlers
>>
>> and then grab this repo:
>>
>> https://github.com/ipython/jsplugins
>>
>> I would start by testing the d3graph plugin and verify that you can do
>> what I show here (watch ~ 40 seconds):
>>
>> http://www.youtube.com/watch?v=F4rFuIb1Ie4&t=40m0s
>>
>> That should give you the basics.  Then the webgl visualizer example is
>> here:
>>
>> https://github.com/RishiRamraj/seepymol
>>
>
OK so I now have a very experimental proof of concept of how integrating
Galry in the IPython notebook. There's a short demo here:
http://www.youtube.com/watch?v=taN4TobRS-E

I'll put the code on github but there's of course much more to do.

I'll also work on a basic matplotlib-like high-level interface that will
work in both standard python/ipython consoles, and in the IPython notebook.

Cheers,
Cyrille
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Re: [matplotlib-devel] RFC: boxplot_enhanced & paired_stats

2012-11-17 Thread Yaroslav Halchenko
Thanks everyone for the feedback.

yeah -- scipy dependency is just a joke, as I said, since only sem is in
use, so would be trivial to 'fix'.

As for where to contribute unless to matplotlib -- I would have just
sticked it in our own PyMVPA ;)  but I think those would be generally
useful, so I will just try to cook up a proper PR against matplotlib
some time next week and then go from there.

Cheers!

On Fri, 16 Nov 2012, Paul Hobson wrote:
>  [4]http://nbviewer.ipython.org/url/www.onerussian.com/tmp/run_plots.ipynb

>  > I wonder if there is a need/place for it in matplotlib and what
>  changes would
>  > you advise. Sorry for the lack of documentation -- I guess I have not
>  finished
>  > it at that point (scipy dependency can easily be dropped, used only
>  for
>  > standard error function iirc):
>  Looks nice. We'd certainly be interesting in including it in
>  statsmodels/graphics if there isn't sufficient interest here and/or
>  you'd like to keep the scipy dependency. ;)
>I was going to suggest either the same thing or adding it to pandas. I
>think statsmodels if the better fit, though. I also noticed scipy is only
>used for scipy.stats.sem -- so it might be easy enough to loose the scipy
>dependency. Just a thought.
-- 
Yaroslav O. Halchenko
Postdoctoral Fellow,   Department of Psychological and Brain Sciences
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834   Fax: +1 (603) 646-1419
WWW:   http://www.linkedin.com/in/yarik

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Re: [matplotlib-devel] OpenGL backend with Galry

2012-11-17 Thread Fernando Perez
On Sat, Nov 17, 2012 at 4:07 PM, Cyrille Rossant
 wrote:
> OK so I now have a very experimental proof of concept of how integrating
> Galry in the IPython notebook. There's a short demo here:
> http://www.youtube.com/watch?v=taN4TobRS-E
>
> I'll put the code on github but there's of course much more to do.
>
> I'll also work on a basic matplotlib-like high-level interface that will
> work in both standard python/ipython consoles, and in the IPython notebook.

Awesome!  This is really great to see, before long we'll sort out
these APIs so all this can be made available easily to end users.

Great job!

Cheers,

f

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