Re: [Paraview] macOS DMG file problems

2018-07-09 Thread Michael Jackson
Hmm. Maybe we got a botched download. I'll try again. We had the same 
issue with our own project and I got the basic scripts to generate the 
disk image from the ParaView project. Just wanted to make sure there 
wasn't an inherent problem that I was missing.


Thanks
Mike Jackson

Shawn Waldon wrote on 7/9/18 11:18 AM:

Hi Michael,

I just tried here and I can open 
ParaView-5.5.2-Qt5-MPI-OSX10.8-64bit.dmg (downloaded from the ParaView 
website) on my 10.11 (El Capitan) machine.  Also, the machine that 
makes the unsigned dmgs is only 10.12 so it shouldn't default to 
APFS.  I'm not sure about the machine used to sign the signed binaries 
though.


Shawn

On Mon, Jul 9, 2018 at 10:55 AM, Michael Jackson 
mailto:mike.jack...@bluequartz.net>> wrote:


I am having problems mounting the disk imgae (.dmg file) from the
latest ParaView 5.5.2 release on systems older than 10.13 (high
sierra). Is it possible that the disk image format was APFS
instead of HFS+?

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BlueQuartz Software

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[Paraview] macOS DMG file problems

2018-07-09 Thread Michael Jackson
I am having problems mounting the disk imgae (.dmg file) from the latest 
ParaView 5.5.2 release on systems older than 10.13 (high sierra). Is it 
possible that the disk image format was APFS instead of HFS+?

 

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Re: [Paraview] Incorrectly reading Int64 values from XDMF file on Windows (5.5.2)

2018-06-29 Thread Michael Jackson
This is with the Xdmf reader on ParaView 5.5.2 on Windows. I did not try the 
Xdmf 3 reader as it does not work on our .xdmf file. I can probably get the 
data to you for testing although it can be quite large (4GB I think…)

 

--

Mike Jackson

 

On 6/21/18, 11:14 AM, "David E DeMarle"  wrote:

 

Very likely to be a bug in the reader (or possibly the library) where we assume 
the wrong size for int on 64 bit windows.

 

If you can't narrow it down yourself, share the data and let me know if this is 
XDMF2 or XDMF3 or both, and I can probably find some time via Marcus's project.


David E DeMarle
Kitware, Inc.
Principal Engineer
21 Corporate Drive
Clifton Park, NY 12065-8662
Phone: 518-881-4909

 

 

On Tue, Jun 19, 2018 at 3:16 PM Michael Jackson  
wrote:

I have an HDF5 file with an XDMF wrapper that reads just fine on macOS using 
ParaView 5.5.2 but on Windows using 5.5.2 when I visualize the Int64 array 
where ALL the values should be 20 every other slice of data is 0. This is a 
"ImageData" type geometry. I am happy to share the files. Just not sure what is 
going wrong or if there is a bug in the XDMF reader or ParaView or my .xdmf 
file.


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  BlueQuartz Software
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Re: [Paraview] [EXTERNAL] Re: Screenshots to movies

2018-05-16 Thread Michael Jackson
If you happen to be on macOS AND you happen to still have a license for 
Quicktime 7 Pro, that will also create a movie from the images. You can export 
in whatever format that Quicktime supports.

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  BlueQuartz Software
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-Original Message-
From: ParaView <paraview-boun...@public.kitware.com> on behalf of "Scott, W 
Alan via ParaView" <paraview@public.kitware.com>
Reply-To: "Scott, W Alan" <wasc...@sandia.gov>
Date: Tuesday, May 15, 2018 at 9:51 PM
To: Francesco Poli <invernom...@paranoici.org>, "Ayachit, Utkarsh (External 
Contacts)" <utkarsh.ayac...@kitware.com>
Cc: ParaView <parav...@paraview.org>
Subject: Re: [Paraview] [EXTERNAL] Re:  Screenshots to movies

Francesco,

There was a known bug/feature in the .avi writer in ParaView 5.4.1, where 
it wrote a version of .avi that was not compatible with the OS X Quicktime 
player (the OS X default) and the Windows Media player.  This has been 
corrected in ParaView 5.5.0.  (I just tested them on my MacBook.)

Alan


On 5/15/18, 4:42 PM, "Francesco Poli" <invernom...@paranoici.org> wrote:

On Tue, 15 May 2018 13:11:59 -0400 Utkarsh Ayachit wrote:

> ffmeg is your friend on linux. It needs a little figuring things out, 
but
> both resizing images and then converting them to videos is possible.

ParaView used to also be able to save animations as MJPEG AVI
(.avi) files.

Unfortunately, the version currently in Debian GNU/Linux (unstable and
testing) seems to have a regression and is unable to save .avi files.
See my [bug report](https://bugs.debian.org/892293) on the Debian BTS...

My current workaround is:

 → save animations as PNG images

 → convert them with

   $ ffmpeg -f image2 -framerate 5 -i input.%04d.png \
-vcodec mjpeg -pix_fmt yuv420p -q:v 3 output.avi


Please note that ParaView used to save .avi files with pixel format
yuvj422p (until it stopped doing so, because of the above mentioned
regression), but I started to use pixel format yuv420p, to work around
a [bug](https://bugs.debian.org/863663) in GStreamer.
With this pixel format the animation may be correctly played by
GStreamer on GNU/Linux and hence, when embedded in a PDF page, by
pdf-presenter-console on GNU/Linux, as well as by Acrobat Reader DC on
Windows...

If anyone knows any better strategy, comments are welcome!


-- 
 http://www.inventati.org/frx/
 There's not a second to spare! To the laboratory!
. Francesco Poli .
 GnuPG key fpr == CA01 1147 9CD2 EFDF FB82  3925 3E1C 27E1 1F69 BFFE


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Re: [Paraview] DigitalRockPhysics Plugin Usage

2018-04-12 Thread Michael Jackson
Thanks for the data. The difference was that your data was point based where 
ours was Cell based. I ran the Cell data to Point Data filter and then was able 
to successfully run the 2 Rock filters. The results were not as I expected. 
Some of our “Features” are getting exploded down to the pixel level where 
others are successfully kept intact. I am not familiar with the Digital Rock 
Physics or the algorithm being used but there probably is enough of a 
difference between the assumptions that the filter isn’t going to work for us. 
I am happy to provide sample data sets and discuss what the data is and if the 
filters would truly work on our data. The visualization is novel and I think it 
would help our users in the long run if we could figure out the differences.

 

Thanks

--

Michael Jackson | Owner, President

  BlueQuartz Software

[e] mike.jack...@bluequartz.net

[w] www.bluequartz.net

From: Mathieu Westphal <mathieu.westp...@kitware.com>
Date: Thursday, April 12, 2018 at 9:31 AM
To: Michael Jackson <mike.jack...@bluequartz.net>
Cc: ParaView <parav...@paraview.org>
Subject: Re: [Paraview] DigitalRockPhysics Plugin Usage

 

Hi Michael,

There is example data in our test data, please find it attached with an example 
usage of the Explode filter.

Best regards,

 

 


Mathieu Westphal

 

On Thu, Apr 12, 2018 at 2:50 PM, Michael Jackson <mike.jack...@bluequartz.net> 
wrote:

What kind of data do I need to have in order to use both of the new Digital 
Rock Physics Filters? I ask because I would like to reproduce the screen shots 
from the ParaView 5.5.0 release notes but with our own data. Our current data 
set is an Image data where we have a Scalar value called "Feature ID" that 
groups voxels into unique features. The values are 32 bit signed integer. I can 
run the Material Cluster Analysis filter and that seems to run but when I run 
the Material Cluster Explode filter I get a bunch of flat "sheets" instead of 
the features that I should be seeing? Is there an example data set somewhere 
that could be used to experiment with these filters?

https://drive.google.com/open?id=153azI_-dE0N7Xw0agM8OYBF508cDNSdx

--
Michael A. Jackson 400 S. Pioneer Blvd
Owner, President   Springboro, Ohio 45066
BlueQuartz Software, LLC   EMail: mike.jack...@bluequartz.net
Voice: 937-790-1601Web: http://www.bluequartz.net
Fax: 937-746-0783



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Re: [Paraview] How to cancel Animation Save

2018-04-12 Thread Michael Jackson
So the issue is related to when you export an animation as a bunch of images 
and when the options dialog window comes up you change the resolution of the 
output image to some custom value which forces the rendering portion of the 
window to become smaller. What I did to work-around the issue is that I used 
the new "preview" mode of ParaView 5.5.0 to set the preview to 1920x1080, then 
did the export animation and the images are saved correctly. This is 
reproducible on several of my macOS machines here at work.

--
Michael Jackson | Owner, President
  BlueQuartz Software
[e] mike.jack...@bluequartz.net
[w] www.bluequartz.net

-Original Message-
From: ParaView <paraview-boun...@public.kitware.com> on behalf of Utkarsh 
Ayachit <utkarsh.ayac...@kitware.com>
Date: Wednesday, April 11, 2018 at 9:36 AM
To: Michael Jackson <mike.jack...@bluequartz.net>
Cc: ParaView <parav...@paraview.org>
Subject: Re: [Paraview] How to cancel Animation Save

Doesn't ring a bell, sorry. If it's fairly reproducible, please do
report an issue with the steps to reproduce so we can track it down.

Utkarsh


    On Wed, Apr 11, 2018 at 9:27 AM, Michael Jackson
<mike.jack...@bluequartz.net> wrote:
> Thanks for the update. I'll be more careful when starting my animation. 
The reason I had to cancel was that the images being saved were corrupted with 
a "stitch line" both horizontally and vertically (Image attached). ParaView 
5.4.1 did not do this. Thoughts? My video card inside my MacPro is a Radeon 
7950 3GB card in a Mac Pro 5,1.
>
> --
> Michael Jackson | Owner, President
>   BlueQuartz Software
> [e] mike.jack...@bluequartz.net
> [w] www.bluequartz.net
>
> -Original Message-
> From: Utkarsh Ayachit <utkarsh.ayac...@kitware.com>
> Date: Wednesday, April 11, 2018 at 9:22 AM
> To: Michael Jackson <mike.jack...@bluequartz.net>
> Cc: ParaView <parav...@paraview.org>
> Subject: Re: [Paraview] How to cancel Animation Save
>
> There isn't a way currently. I've reported an issue:
> https://gitlab.kitware.com/paraview/paraview/issues/18103
>
>
> On Wed, Apr 11, 2018 at 9:01 AM, Michael Jackson
> <mike.jack...@bluequartz.net> wrote:
> > ParaView 5.5.0. Was setting up a new animation that I was saving 
out to disk. 1400 Timesteps. Started the export as .png images but the images 
are not correct. So how do I cancel the export? On my machine the export will 
take about 25 minutes so waiting for it to finish kind sucks. Force quitting 
seems to be the only obvious way to stop it. But then I lost my state (maybe 
having a backup state file somewhere might help recover from this).
> >
> > I will assume "operator error" on this one: Where is the cancel 
animation export button?
> >
> > MacOS 10.13.x with ParaView 5.5.0.
> >
> > --
> > Michael Jackson | Owner, President
> >   BlueQuartz Software
> > [e] mike.jack...@bluequartz.net
> > [w] www.bluequartz.net
> >
> >
> > ___
> > Powered by www.kitware.com
> >
> > Visit other Kitware open-source projects at 
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> >
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http://paraview.org/Wiki/ParaView
> >
> > Search the list archives at: http://markmail.org/search/?q=ParaView
> >
> > Follow this link to subscribe/unsubscribe:
> > https://public.kitware.com/mailman/listinfo/paraview
>
>
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[Paraview] DigitalRockPhysics Plugin Usage

2018-04-12 Thread Michael Jackson
What kind of data do I need to have in order to use both of the new Digital 
Rock Physics Filters? I ask because I would like to reproduce the screen shots 
from the ParaView 5.5.0 release notes but with our own data. Our current data 
set is an Image data where we have a Scalar value called "Feature ID" that 
groups voxels into unique features. The values are 32 bit signed integer. I can 
run the Material Cluster Analysis filter and that seems to run but when I run 
the Material Cluster Explode filter I get a bunch of flat "sheets" instead of 
the features that I should be seeing? Is there an example data set somewhere 
that could be used to experiment with these filters?

https://drive.google.com/open?id=153azI_-dE0N7Xw0agM8OYBF508cDNSdx

-- 
Michael A. Jackson 400 S. Pioneer Blvd
Owner, President   Springboro, Ohio 45066
BlueQuartz Software, LLC   EMail: mike.jack...@bluequartz.net
Voice: 937-790-1601Web: http://www.bluequartz.net
Fax: 937-746-0783
 


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Re: [Paraview] How to cancel Animation Save

2018-04-11 Thread Michael Jackson
Seems to be a "Non retina" issue. I tried the same export on my Retina 2013 
MacBook Pro and the images are correct. The original export was done on a 
standard non-retina monitor.

--
Michael Jackson | Owner, President
  BlueQuartz Software
[e] mike.jack...@bluequartz.net
[w] www.bluequartz.net

-Original Message-
From: ParaView <paraview-boun...@public.kitware.com> on behalf of Utkarsh 
Ayachit <utkarsh.ayac...@kitware.com>
Date: Wednesday, April 11, 2018 at 9:36 AM
To: Michael Jackson <mike.jack...@bluequartz.net>
Cc: ParaView <parav...@paraview.org>
Subject: Re: [Paraview] How to cancel Animation Save

Doesn't ring a bell, sorry. If it's fairly reproducible, please do
report an issue with the steps to reproduce so we can track it down.

Utkarsh


    On Wed, Apr 11, 2018 at 9:27 AM, Michael Jackson
<mike.jack...@bluequartz.net> wrote:
> Thanks for the update. I'll be more careful when starting my animation. 
The reason I had to cancel was that the images being saved were corrupted with 
a "stitch line" both horizontally and vertically (Image attached). ParaView 
5.4.1 did not do this. Thoughts? My video card inside my MacPro is a Radeon 
7950 3GB card in a Mac Pro 5,1.
>
> --
> Michael Jackson | Owner, President
>   BlueQuartz Software
> [e] mike.jack...@bluequartz.net
> [w] www.bluequartz.net
>
> -Original Message-
> From: Utkarsh Ayachit <utkarsh.ayac...@kitware.com>
> Date: Wednesday, April 11, 2018 at 9:22 AM
> To: Michael Jackson <mike.jack...@bluequartz.net>
> Cc: ParaView <parav...@paraview.org>
> Subject: Re: [Paraview] How to cancel Animation Save
>
> There isn't a way currently. I've reported an issue:
> https://gitlab.kitware.com/paraview/paraview/issues/18103
>
>
> On Wed, Apr 11, 2018 at 9:01 AM, Michael Jackson
> <mike.jack...@bluequartz.net> wrote:
> > ParaView 5.5.0. Was setting up a new animation that I was saving 
out to disk. 1400 Timesteps. Started the export as .png images but the images 
are not correct. So how do I cancel the export? On my machine the export will 
take about 25 minutes so waiting for it to finish kind sucks. Force quitting 
seems to be the only obvious way to stop it. But then I lost my state (maybe 
having a backup state file somewhere might help recover from this).
> >
> > I will assume "operator error" on this one: Where is the cancel 
animation export button?
> >
> > MacOS 10.13.x with ParaView 5.5.0.
> >
> > --
> > Michael Jackson | Owner, President
> >   BlueQuartz Software
> > [e] mike.jack...@bluequartz.net
> > [w] www.bluequartz.net
> >
> >
> > ___
> > Powered by www.kitware.com
> >
> > Visit other Kitware open-source projects at 
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> >
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> >
> > Search the list archives at: http://markmail.org/search/?q=ParaView
> >
> > Follow this link to subscribe/unsubscribe:
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>
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[Paraview] How to cancel Animation Save

2018-04-11 Thread Michael Jackson
ParaView 5.5.0. Was setting up a new animation that I was saving out to disk. 
1400 Timesteps. Started the export as .png images but the images are not 
correct. So how do I cancel the export? On my machine the export will take 
about 25 minutes so waiting for it to finish kind sucks. Force quitting seems 
to be the only obvious way to stop it. But then I lost my state (maybe having a 
backup state file somewhere might help recover from this).

I will assume "operator error" on this one: Where is the cancel animation 
export button?

MacOS 10.13.x with ParaView 5.5.0.

--
Michael Jackson | Owner, President
  BlueQuartz Software
[e] mike.jack...@bluequartz.net
[w] www.bluequartz.net


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